RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 C11orf21Q9P2W6 132 aa2.04□□□□□ -2.08
SMCHD1-203ENST00000577880 A0A1W2PPM0 123 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 hDV103S1A0JD37 113 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 CRIP1P50238 77 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 MOBPQ13875 183 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 PYY3Q5JQD4 70 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 NBPF19A0A087WUL8 3843 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 HCFC1P51610 2035 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 RETNLBQ9BQ08 111 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 FRYLO94915 3013 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 TEP1Q99973 2627 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 A8MZ25 164 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 B5MCH6 92 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 CASC10Q5T4H9 136 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 SERP2Q8N6R1 65 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 ITPR3Q14573 2671 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 PTPRBP23467 1997 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 SCXQ7RTU7 201 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 TTTY13Q9BZ97 58 aa2.03□□□□□ -2.08
SMCHD1-203ENST00000577880 CFAP46Q8IYW2 2715 aa2.03□□□□□ -2.09
SMCHD1-203ENST00000577880 A0A087WSZ3 146 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 A0A087WTM6 91 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 K7EP34 96 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 DNAH10OSP0CZ25 163 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 LINC00173Q6ZV60 143 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 LINC00528Q8N1L1 170 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 MAPKAPK5-AS1Q8N8E1 139 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 ITPR1Q14643 2758 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 A0A087WYN8 130 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 ATOX1O00244 68 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 UBE2V1Q13404 147 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 CRIP3Q6Q6R5 217 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 Q8NBF4 154 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 CHD6Q8TD26 2715 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 DLEU1O43261 78 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 LINC00694P0DN24 101 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 PHF5AQ7RTV0 110 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 LINC00167Q96N53 147 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 ATP5EP2Q5VTU8 51 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 C5orf42Q9H799 3197 aa2.02□□□□□ -2.09
SMCHD1-203ENST00000577880 IGKV2D-30A0A075B6S6 120 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 FAM236AA0A1B0GUQ0 79 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 FAM236BA0A1B0GV22 79 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 M0R2T5 61 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 IGKV2-30P06310 120 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 SMIM1B2RUZ4 78 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 NDUFC2O95298 119 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 SPINK1P00995 79 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 SMIM11BQ8TCY0 68 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 COL4A2P08572 1712 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 BIRC6Q9NR09 4857 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 MRPS12O15235 138 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 BCE1O60756 84 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 C11orf72Q8NBR9 251 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 TRIOO75962 3097 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 SMG1Q96Q15 3661 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 MT-ATP8P03928 68 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 CHTF8P0CG12 524 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 TEN1Q86WV5 123 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 FAM30AQ9NZY2 134 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 APLNQ9ULZ1 77 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 ZZEF1O43149 2961 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 A0A0C4DFX4 3053 aa2.01□□□□□ -2.09
SMCHD1-203ENST00000577880 FXYD2P54710 66 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 RBM12B-AS1Q9P1G2 102 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 A0A096LNT2 108 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 LCE6AA0A183 80 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 LINC00575Q6W349 94 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 NTM-AS1Q6ZSK4 140 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 CNFNQ9BYD5 112 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 IMUPQ9GZP8 106 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 EML5Q05BV3 1969 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 FLNAP21333 2647 aaKnown RBP2□□□□□ -2.09
SMCHD1-203ENST00000577880 LINC00643Q86TS7 51 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 Q8N814 137 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 DMBT1Q9UGM3 2413 aaPredicted RBP2□□□□□ -2.09
SMCHD1-203ENST00000577880 TAX1BP3O14907 124 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 CPAMD8Q8IZJ3 1885 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 ANK2Q01484 3957 aa2□□□□□ -2.09
SMCHD1-203ENST00000577880 LINC00313P59037 77 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 SSBP3-AS1Q7Z2R9 100 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 Q96NJ1 140 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 VPS13AQ96RL7 3174 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 GVQW2A0A096LPI5 108 aaPredicted RBP1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 IGIPA6NJ69 53 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 PRR3P79522 188 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 KRTAP1-1Q07627 177 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 C10orf91Q5T1B1 145 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 ZNF575Q86XF7 245 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 KRTAP1-3Q8IUG1 177 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 PSORS1C2Q9UIG4 136 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 ZNF292O60281 2723 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 LINC01547P58512 204 aaPredicted RBP1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 KRTAP10-3P60369 221 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 COA6Q5JTJ3 125 aaKnown RBP1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 ENHOQ6UWT2 76 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 C9orf163Q8N9P6 203 aa1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 FLG2Q5D862 2391 aaPredicted RBP1.99□□□□□ -2.09
SMCHD1-203ENST00000577880 COL6A5A8TX70 2615 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms