RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 C6orf48Q9UBA6 75 aa6.58□□□□□ -1.36
CRLF3-202ENST00000577725 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
CRLF3-202ENST00000577725 COX11Q9Y6N1 276 aa6.58□□□□□ -1.36
CRLF3-202ENST00000577725 TMEM238C9JI98 176 aa6.57□□□□□ -1.36
CRLF3-202ENST00000577725 CXCL5P42830 114 aa6.57□□□□□ -1.36
CRLF3-202ENST00000577725 FXYD2P54710 66 aa6.57□□□□□ -1.36
CRLF3-202ENST00000577725 LINC00158P58513 81 aa6.57□□□□□ -1.36
CRLF3-202ENST00000577725 SRSF9Q13242 221 aaKnown RBP eCLIP6.57□□□□□ -1.36
CRLF3-202ENST00000577725 BVES-AS1Q5T3Y7 98 aa6.57□□□□□ -1.36
CRLF3-202ENST00000577725 SNHG12Q9BXW3 62 aa6.57□□□□□ -1.36
CRLF3-202ENST00000577725 FAT1Q14517 4588 aa6.56□□□□□ -1.36
CRLF3-202ENST00000577725 TIMM17BO60830 172 aa6.56□□□□□ -1.36
CRLF3-202ENST00000577725 SLPIP03973 132 aa6.56□□□□□ -1.36
CRLF3-202ENST00000577725 TAL2Q16559 108 aa6.56□□□□□ -1.36
CRLF3-202ENST00000577725 MUSTN1Q8IVN3 82 aa6.56□□□□□ -1.36
CRLF3-202ENST00000577725 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
CRLF3-202ENST00000577725 SPANXB1Q9NS25 103 aaPredicted RBP6.56□□□□□ -1.36
CRLF3-202ENST00000577725 VPS13BQ7Z7G8 4022 aa6.56□□□□□ -1.36
CRLF3-202ENST00000577725 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.55□□□□□ -1.36
CRLF3-202ENST00000577725 LRCOL1A6NCL2 159 aa6.55□□□□□ -1.36
CRLF3-202ENST00000577725 SYCNQ0VAF6 134 aa6.55□□□□□ -1.36
CRLF3-202ENST00000577725 SOSTDC1Q6X4U4 206 aa6.55□□□□□ -1.36
CRLF3-202ENST00000577725 CEND1Q8N111 149 aa6.55□□□□□ -1.36
CRLF3-202ENST00000577725 MIR7-3HGQ8N6C7 128 aa6.55□□□□□ -1.36
CRLF3-202ENST00000577725 C2orf48Q96LS8 159 aa6.55□□□□□ -1.36
CRLF3-202ENST00000577725 SPANXDQ9BXN6 97 aa6.55□□□□□ -1.36
CRLF3-202ENST00000577725 SPANXCQ9NY87 97 aa6.55□□□□□ -1.36
CRLF3-202ENST00000577725 FLG2Q5D862 2391 aaPredicted RBP6.55□□□□□ -1.36
CRLF3-202ENST00000577725 CIRBPQ14011 172 aaKnown RBP6.54□□□□□ -1.36
CRLF3-202ENST00000577725 CARD19Q96LW7 228 aa6.54□□□□□ -1.36
CRLF3-202ENST00000577725 K7ERJ3 54 aa6.53□□□□□ -1.36
CRLF3-202ENST00000577725 FUSP35637 526 aaKnown RBP eCLIP6.53□□□□□ -1.36
CRLF3-202ENST00000577725 SFTA2Q6UW10 78 aa6.53□□□□□ -1.36
CRLF3-202ENST00000577725 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
CRLF3-202ENST00000577725 TRBV30A0A0K0K1B3 111 aa6.52□□□□□ -1.37
CRLF3-202ENST00000577725 KRTAP29-1A8MX34 341 aaPredicted RBP6.52□□□□□ -1.37
CRLF3-202ENST00000577725 LCE2BO14633 110 aa6.52□□□□□ -1.37
CRLF3-202ENST00000577725 A0A087WTM6 91 aa6.51□□□□□ -1.37
CRLF3-202ENST00000577725 A4D1N5 150 aa6.51□□□□□ -1.37
CRLF3-202ENST00000577725 COL5A1-AS1Q5SY13 56 aa6.51□□□□□ -1.37
CRLF3-202ENST00000577725 NHP2Q9NX24 153 aaKnown RBP6.51□□□□□ -1.37
CRLF3-202ENST00000577725 F8WDY8 70 aa6.5□□□□□ -1.37
CRLF3-202ENST00000577725 IFITM1P13164 125 aa6.5□□□□□ -1.37
CRLF3-202ENST00000577725 RPL18AQ02543 176 aaKnown RBP6.5□□□□□ -1.37
CRLF3-202ENST00000577725 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
CRLF3-202ENST00000577725 C14orf177Q52M58 125 aa6.5□□□□□ -1.37
CRLF3-202ENST00000577725 Q6ZVH6 145 aa6.5□□□□□ -1.37
CRLF3-202ENST00000577725 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
CRLF3-202ENST00000577725 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
CRLF3-202ENST00000577725 A6NDN8 102 aa6.49□□□□□ -1.37
CRLF3-202ENST00000577725 RPL24P83731 157 aaKnown RBP6.49□□□□□ -1.37
CRLF3-202ENST00000577725 COX17Q14061 63 aa6.49□□□□□ -1.37
CRLF3-202ENST00000577725 LINC01620Q4KN68 170 aa6.49□□□□□ -1.37
CRLF3-202ENST00000577725 Q8N814 137 aa6.49□□□□□ -1.37
CRLF3-202ENST00000577725 Q8NDZ9 215 aa6.49□□□□□ -1.37
CRLF3-202ENST00000577725 XAGE1AQ9HD64 81 aa6.49□□□□□ -1.37
CRLF3-202ENST00000577725 CFC1BP0CG36 223 aa6.48□□□□□ -1.37
CRLF3-202ENST00000577725 CFC1P0CG37 223 aa6.48□□□□□ -1.37
CRLF3-202ENST00000577725 XGP55808 180 aa6.48□□□□□ -1.37
CRLF3-202ENST00000577725 RNF151Q2KHN1 245 aa6.48□□□□□ -1.37
CRLF3-202ENST00000577725 Q6ZRP5 223 aa6.48□□□□□ -1.37
CRLF3-202ENST00000577725 RAB37Q96AX2 223 aa6.48□□□□□ -1.37
CRLF3-202ENST00000577725 CNBPP62633 177 aaKnown RBP6.47□□□□□ -1.37
CRLF3-202ENST00000577725 PRR3P79522 188 aaKnown RBP6.47□□□□□ -1.37
CRLF3-202ENST00000577725 GAGE2BQ13066 116 aa6.47□□□□□ -1.37
CRLF3-202ENST00000577725 NAA38Q9BRA0 125 aaKnown RBP6.47□□□□□ -1.37
CRLF3-202ENST00000577725 LOC107984640A0A0U1RRK4 108 aa6.46□□□□□ -1.38
CRLF3-202ENST00000577725 B5MCH6 92 aa6.46□□□□□ -1.38
CRLF3-202ENST00000577725 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
CRLF3-202ENST00000577725 TAX1BP3O14907 124 aa6.46□□□□□ -1.38
CRLF3-202ENST00000577725 NCR3O14931 201 aa6.46□□□□□ -1.38
CRLF3-202ENST00000577725 KRTAP10-2P60368 255 aa6.46□□□□□ -1.38
CRLF3-202ENST00000577725 COPS9Q8WXC6 57 aa6.46□□□□□ -1.38
CRLF3-202ENST00000577725 IGKV2-28A0A075B6P5 120 aa6.45□□□□□ -1.38
CRLF3-202ENST00000577725 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.45□□□□□ -1.38
CRLF3-202ENST00000577725 A0A1B0GWB2 263 aa6.45□□□□□ -1.38
CRLF3-202ENST00000577725 H7C2G1 150 aa6.45□□□□□ -1.38
CRLF3-202ENST00000577725 IGKV2D-28P01615 120 aa6.45□□□□□ -1.38
CRLF3-202ENST00000577725 C9orf129Q5T035 196 aaKnown RBP6.45□□□□□ -1.38
CRLF3-202ENST00000577725 PPDPFQ9H3Y8 114 aa6.45□□□□□ -1.38
CRLF3-202ENST00000577725 A0A096LNI7 61 aa6.44□□□□□ -1.38
CRLF3-202ENST00000577725 IGKV2-24A0A0C4DH68 120 aa6.44□□□□□ -1.38
CRLF3-202ENST00000577725 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
CRLF3-202ENST00000577725 CHTF8P0CG12 524 aa6.44□□□□□ -1.38
CRLF3-202ENST00000577725 LCE2CQ5TA81 110 aa6.44□□□□□ -1.38
CRLF3-202ENST00000577725 A0A0B4J2C4 111 aa6.43□□□□□ -1.38
CRLF3-202ENST00000577725 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
CRLF3-202ENST00000577725 FAM168BA1KXE4 195 aa6.43□□□□□ -1.38
CRLF3-202ENST00000577725 SMR3BP02814 79 aaPredicted RBP6.43□□□□□ -1.38
CRLF3-202ENST00000577725 RPL13AP40429 203 aaKnown RBP6.43□□□□□ -1.38
CRLF3-202ENST00000577725 PCP4P48539 62 aa6.43□□□□□ -1.38
CRLF3-202ENST00000577725 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
CRLF3-202ENST00000577725 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
CRLF3-202ENST00000577725 LINC00337Q8N6G1 96 aa6.43□□□□□ -1.38
CRLF3-202ENST00000577725 TSPAN13O95857 204 aa6.42□□□□□ -1.38
CRLF3-202ENST00000577725 C9orf163Q8N9P6 203 aa6.42□□□□□ -1.38
CRLF3-202ENST00000577725 IGLV5-52A0A0A0MRZ9 124 aa6.41□□□□□ -1.38
CRLF3-202ENST00000577725 VPREB1P12018 145 aa6.41□□□□□ -1.38
CRLF3-202ENST00000577725 FAM19A5Q7Z5A7 132 aaPredicted RBP6.41□□□□□ -1.38
CRLF3-202ENST00000577725 OR13C6PQ8NH95 151 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms