RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 KIR2DL5BQ8NHK3 375 aa12.52□□□□□ -0.41
ATPAF1-214ENST00000576409 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.51□□□□□ -0.41
ATPAF1-214ENST00000576409 LELP1Q5T871 98 aa12.51□□□□□ -0.41
ATPAF1-214ENST00000576409 RETNQ9HD89 108 aa12.51□□□□□ -0.41
ATPAF1-214ENST00000576409 WFDC10BQ8IUB3 73 aa12.51□□□□□ -0.41
ATPAF1-214ENST00000576409 TEX15Q9BXT5 2789 aa12.51□□□□□ -0.41
ATPAF1-214ENST00000576409 WFDC13Q8IUB5 93 aa12.51□□□□□ -0.41
ATPAF1-214ENST00000576409 H0Y9J4 135 aa12.51□□□□□ -0.41
ATPAF1-214ENST00000576409 MIFP14174 115 aa12.5□□□□□ -0.41
ATPAF1-214ENST00000576409 NOTCH1P46531 2555 aa12.5□□□□□ -0.41
ATPAF1-214ENST00000576409 SMCR5Q8TEV8 140 aa12.5□□□□□ -0.41
ATPAF1-214ENST00000576409 H3BQ85 93 aa12.5□□□□□ -0.41
ATPAF1-214ENST00000576409 IGLV5-45A0A087WSX0 123 aa12.49□□□□□ -0.41
ATPAF1-214ENST00000576409 A0A0J9YWU9 116 aa12.49□□□□□ -0.41
ATPAF1-214ENST00000576409 UBR5O95071 2799 aaPredicted RBP12.49□□□□□ -0.41
ATPAF1-214ENST00000576409 FAM19A3Q7Z5A8 133 aa12.48□□□□□ -0.41
ATPAF1-214ENST00000576409 FAM30AQ9NZY2 134 aa12.48□□□□□ -0.41
ATPAF1-214ENST00000576409 COX17Q14061 63 aa12.48□□□□□ -0.41
ATPAF1-214ENST00000576409 UBE2AP49459 152 aa12.47□□□□□ -0.41
ATPAF1-214ENST00000576409 DMXL1Q9Y485 3027 aa12.47□□□□□ -0.41
ATPAF1-214ENST00000576409 M0R378 163 aa12.46□□□□□ -0.41
ATPAF1-214ENST00000576409 LY6G6DO95868 133 aa12.46□□□□□ -0.41
ATPAF1-214ENST00000576409 IGHV4-30-4P0DP06 118 aa12.46□□□□□ -0.41
ATPAF1-214ENST00000576409 Q6ZVQ6 151 aa12.46□□□□□ -0.41
ATPAF1-214ENST00000576409 HELZ2Q9BYK8 2649 aaKnown RBP12.46□□□□□ -0.42
ATPAF1-214ENST00000576409 C10orf25Q5T742 122 aa12.45□□□□□ -0.42
ATPAF1-214ENST00000576409 NANOS2P60321 138 aaKnown RBP12.44□□□□□ -0.42
ATPAF1-214ENST00000576409 ASPMQ8IZT6 3477 aa12.44□□□□□ -0.42
ATPAF1-214ENST00000576409 NBEAL1Q6ZS30 2694 aa12.43□□□□□ -0.42
ATPAF1-214ENST00000576409 TRAV7A0A075B6U4 112 aa12.43□□□□□ -0.42
ATPAF1-214ENST00000576409 LINC00575Q6W349 94 aa12.43□□□□□ -0.42
ATPAF1-214ENST00000576409 NDUFC2-KCTD14E9PQ53 114 aa12.42□□□□□ -0.42
ATPAF1-214ENST00000576409 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.42□□□□□ -0.42
ATPAF1-214ENST00000576409 LINC01547P58512 204 aaPredicted RBP12.42□□□□□ -0.42
ATPAF1-214ENST00000576409 SPTSSBQ8NFR3 76 aa12.41□□□□□ -0.42
ATPAF1-214ENST00000576409 KLK9Q2XQG4 91 aa12.41□□□□□ -0.42
ATPAF1-214ENST00000576409 A0A1B0GUV1 79 aa12.4□□□□□ -0.42
ATPAF1-214ENST00000576409 DEFB116Q30KQ4 102 aa12.4□□□□□ -0.42
ATPAF1-214ENST00000576409 NDUFB1O75438 58 aa12.4□□□□□ -0.43
ATPAF1-214ENST00000576409 Q6ZTC4 211 aa12.39□□□□□ -0.43
ATPAF1-214ENST00000576409 MUC7Q8TAX7 377 aa12.39□□□□□ -0.43
ATPAF1-214ENST00000576409 C9orf129Q5T035 196 aaKnown RBP12.36□□□□□ -0.43
ATPAF1-214ENST00000576409 C4orf26Q17RF5 130 aa12.36□□□□□ -0.43
ATPAF1-214ENST00000576409 Q6ZRU5 148 aa12.35□□□□□ -0.43
ATPAF1-214ENST00000576409 COL6A5A8TX70 2615 aa12.35□□□□□ -0.43
ATPAF1-214ENST00000576409 CRYGAP11844 174 aa12.34□□□□□ -0.43
ATPAF1-214ENST00000576409 ZANQ9Y493 2812 aa12.33□□□□□ -0.44
ATPAF1-214ENST00000576409 SMIM26A0A096LP01 95 aa12.33□□□□□ -0.44
ATPAF1-214ENST00000576409 EGFEM1PQ0D2K5 195 aa12.33□□□□□ -0.44
ATPAF1-214ENST00000576409 C1orf137Q5JT78 98 aa12.32□□□□□ -0.44
ATPAF1-214ENST00000576409 SPATA3Q8NHX4 192 aa12.31□□□□□ -0.44
ATPAF1-214ENST00000576409 NDUFC1O43677 76 aa12.3□□□□□ -0.44
ATPAF1-214ENST00000576409 IGKV4-1P06312 121 aa12.3□□□□□ -0.44
ATPAF1-214ENST00000576409 TMEM254Q8TBM7 123 aa12.3□□□□□ -0.44
ATPAF1-214ENST00000576409 LYPD5Q6UWN5 251 aa12.3□□□□□ -0.44
ATPAF1-214ENST00000576409 MUC3AQ02505 3323 aa12.29□□□□□ -0.44
ATPAF1-214ENST00000576409 SERP1Q9Y6X1 66 aa12.29□□□□□ -0.44
ATPAF1-214ENST00000576409 TRAV10A0A0B4J240 114 aa12.29□□□□□ -0.44
ATPAF1-214ENST00000576409 LINC01561Q8N1V8 128 aa12.27□□□□□ -0.44
ATPAF1-214ENST00000576409 C6orf48Q9UBA6 75 aa12.26□□□□□ -0.45
ATPAF1-214ENST00000576409 SETXQ7Z333 2677 aaKnown RBP12.26□□□□□ -0.45
ATPAF1-214ENST00000576409 LINC00208Q96KT6 92 aa12.26□□□□□ -0.45
ATPAF1-214ENST00000576409 IGSF10Q6WRI0 2623 aa12.25□□□□□ -0.45
ATPAF1-214ENST00000576409 DHRS4-AS1Q9P1J3 65 aa12.25□□□□□ -0.45
ATPAF1-214ENST00000576409 PSPHP1O15172 72 aa12.25□□□□□ -0.45
ATPAF1-214ENST00000576409 X6R8D5 127 aa12.24□□□□□ -0.45
ATPAF1-214ENST00000576409 UTP20O75691 2785 aaKnown RBP12.24□□□□□ -0.45
ATPAF1-214ENST00000576409 SPINK6Q6UWN8 80 aa12.24□□□□□ -0.45
ATPAF1-214ENST00000576409 PRYO14603 147 aa12.23□□□□□ -0.45
ATPAF1-214ENST00000576409 TM2D3Q9BRN9 247 aa12.23□□□□□ -0.45
ATPAF1-214ENST00000576409 V9GYY9 64 aa12.23□□□□□ -0.45
ATPAF1-214ENST00000576409 STAB1Q9NY15 2570 aa12.23□□□□□ -0.45
ATPAF1-214ENST00000576409 M0R2N4 97 aa12.21□□□□□ -0.45
ATPAF1-214ENST00000576409 A0A087WSZ3 146 aa12.21□□□□□ -0.45
ATPAF1-214ENST00000576409 TRBV7-6A0A0J9YX20 115 aa12.21□□□□□ -0.45
ATPAF1-214ENST00000576409 TNRC18O15417 2968 aaPredicted RBP12.21□□□□□ -0.46
ATPAF1-214ENST00000576409 ZFHX4Q86UP3 3567 aa12.21□□□□□ -0.46
ATPAF1-214ENST00000576409 KIAA0087Q14695 138 aa12.2□□□□□ -0.46
ATPAF1-214ENST00000576409 Q6ZQT0 140 aa12.2□□□□□ -0.46
ATPAF1-214ENST00000576409 B9D2Q9BPU9 175 aa12.2□□□□□ -0.46
ATPAF1-214ENST00000576409 CELSR2Q9HCU4 2923 aa12.2□□□□□ -0.46
ATPAF1-214ENST00000576409 CHKB-CPT1BH3BT56 60 aa12.19□□□□□ -0.46
ATPAF1-214ENST00000576409 IGLV9-49A0A0B4J1Y8 123 aa12.19□□□□□ -0.46
ATPAF1-214ENST00000576409 PRLHP81277 87 aa12.18□□□□□ -0.46
ATPAF1-214ENST00000576409 C1orf195Q5TG92 126 aa12.18□□□□□ -0.46
ATPAF1-214ENST00000576409 GIG44P09565 113 aaPredicted RBP12.18□□□□□ -0.46
ATPAF1-214ENST00000576409 FAM104AQ969W3 186 aa12.18□□□□□ -0.46
ATPAF1-214ENST00000576409 C16orf95Q9H693 158 aa12.17□□□□□ -0.46
ATPAF1-214ENST00000576409 CR1P17927 2039 aa12.15□□□□□ -0.46
ATPAF1-214ENST00000576409 ATP5EP56381 51 aaPredicted RBP12.15□□□□□ -0.46
ATPAF1-214ENST00000576409 SMIM29Q86T20 159 aa12.15□□□□□ -0.46
ATPAF1-214ENST00000576409 C7orf33Q8WU49 177 aa12.15□□□□□ -0.47
ATPAF1-214ENST00000576409 RELNP78509 3460 aa12.14□□□□□ -0.47
ATPAF1-214ENST00000576409 NF1P21359 2839 aa12.14□□□□□ -0.47
ATPAF1-214ENST00000576409 ESRGQ1W209 222 aa12.14□□□□□ -0.47
ATPAF1-214ENST00000576409 FSHBP01225 129 aa12.13□□□□□ -0.47
ATPAF1-214ENST00000576409 CXCL6P80162 114 aa12.12□□□□□ -0.47
ATPAF1-214ENST00000576409 PLAC8L1A1L4L8 177 aa12.11□□□□□ -0.47
ATPAF1-214ENST00000576409 A6NED7 52 aa12.11□□□□□ -0.47
ATPAF1-214ENST00000576409 DMDP11532 3685 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms