RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TRAV12-3A0A0B4J271 114 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 A0A0J9YX75 114 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 F8VRH5 84 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 H3BVH4 76 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 GNRH2O43555 120 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 NPYP01303 97 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 CMC4P56277 68 aaPredicted RBP2.43□□□□□ -2.02
SMG6-208ENST00000570874 MIAQ16674 131 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 SPINK13Q1W4C9 94 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 DEFB114Q30KQ6 69 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 LUZP6Q538Z0 58 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 S100A7L2Q5SY68 101 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 LINC00269Q8N2A0 174 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 DYNLRB2Q8TF09 96 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 TMEM141Q96I45 108 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 WFDC10AQ9H1F0 79 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 HIVEP2P31629 2446 aa2.43□□□□□ -2.02
SMG6-208ENST00000570874 F8P00451 2351 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 IGLV2-18A0A075B6J9 118 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 TRAV13-2A0A0B4J235 113 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 TRAV21A0A0B4J279 112 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 MYMXA0A1B0GTQ4 84 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 BPY2O14599 106 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 SLC25A20O43772 301 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 RNASE3P12724 160 aaKnown RBP2.42□□□□□ -2.02
SMG6-208ENST00000570874 ESRGQ1W209 222 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 SMCR5Q8TEV8 140 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 RETNLBQ9BQ08 111 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 CYP4F30PQ9H0H9 118 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 LINC00474Q9P2X8 69 aa2.42□□□□□ -2.02
SMG6-208ENST00000570874 NOTCH3Q9UM47 2321 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 OTOGQ6ZRI0 2925 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 C2CD3Q4AC94 2353 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 LOC107984156A0A0G2JMH3 177 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 hDV103S1A0JD37 113 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 A6NED7 52 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 H3BMM0 161 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 KLKP1Q107X0 134 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 FHL2Q14192 279 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 ZNF56Q15929 161 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 DEFB121Q5J5C9 76 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 ARL17AQ8IVW1 177 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 Q8NBF4 154 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 DEFB104AQ8WTQ1 72 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 SMIM2Q9BVW6 85 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 NDUFA12Q9UI09 145 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 HECTD1Q9ULT8 2610 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 MTORP42345 2549 aa2.41□□□□□ -2.02
SMG6-208ENST00000570874 TRBV7-3A0A075B6L6 115 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 C11orf86A6NJI1 115 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 A8MTW9 85 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 H7BZZ5 65 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 IGLV1-51P01701 117 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 MGPP08493 103 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 HTN1P15515 57 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 UBE2D1P51668 147 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 FXYD2P54710 66 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 SYCNQ0VAF6 134 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 KRTAP24-1Q3LI83 254 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 LYPD5Q6UWN5 251 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 NDUFA11Q86Y39 141 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 RPL39LQ96EH5 51 aaKnown RBP2.4□□□□□ -2.03
SMG6-208ENST00000570874 TIMM21Q9BVV7 248 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 CYSTM1Q9H1C7 97 aa2.4□□□□□ -2.03
SMG6-208ENST00000570874 IGHV3-73A0A0B4J1V6 119 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 TRBV6-5A0A0K0K1A5 114 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 A8MWP4 228 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 LECT2O14960 151 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 GIG44P09565 113 aaPredicted RBP2.39□□□□□ -2.03
SMG6-208ENST00000570874 XCL1P47992 114 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 LINC00315P59091 139 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 UBE2D3P61077 147 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 UBE2D2P62837 147 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 SDIM1Q6ZPB5 146 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 C14orf178Q8N769 122 aaPredicted RBP2.39□□□□□ -2.03
SMG6-208ENST00000570874 Q8N814 137 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 C20orf203Q8NBC4 194 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 KIF25-AS1Q9Y6Z4 181 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 CMYA5Q8N3K9 4069 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 HIVEP1P15822 2718 aa2.39□□□□□ -2.03
SMG6-208ENST00000570874 NF1P21359 2839 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 IGKV2D-26A0A0A0MRZ7 120 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 A0A0B4J2C4 111 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 TRBV10-3A0A0K0K1G6 114 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 SDHAF1A6NFY7 115 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 ZNF815PA8K554 130 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 COX6CP09669 75 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 RPL28P46779 137 aaKnown RBP2.38□□□□□ -2.03
SMG6-208ENST00000570874 POLR2KP53803 58 aaKnown RBP2.38□□□□□ -2.03
SMG6-208ENST00000570874 C9orf116Q5BN46 136 aaPredicted RBP2.38□□□□□ -2.03
SMG6-208ENST00000570874 FAM74A4Q5TZK3 123 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 ADM2Q7Z4H4 148 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 Q8NDZ9 215 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 PRO1854Q9UHT4 67 aa2.38□□□□□ -2.03
SMG6-208ENST00000570874 A0A0J9YY99 117 aa2.37□□□□□ -2.03
SMG6-208ENST00000570874 TRBV30A0A0K0K1B3 111 aa2.37□□□□□ -2.03
SMG6-208ENST00000570874 A0A1B0GVX0 72 aa2.37□□□□□ -2.03
SMG6-208ENST00000570874 TMEM223A0PJW6 202 aa2.37□□□□□ -2.03
SMG6-208ENST00000570874 IGIPA6NJ69 53 aa2.37□□□□□ -2.03
SMG6-208ENST00000570874 C16orf90A8MZG2 172 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms