RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 F8WDY8 70 aa6.4□□□□□ -1.38
RBFOX1-220ENST00000570188 CFC1BP0CG36 223 aa6.4□□□□□ -1.38
RBFOX1-220ENST00000570188 CFC1P0CG37 223 aa6.4□□□□□ -1.38
RBFOX1-220ENST00000570188 COX17Q14061 63 aa6.4□□□□□ -1.38
RBFOX1-220ENST00000570188 C9orf116Q5BN46 136 aaPredicted RBP6.4□□□□□ -1.38
RBFOX1-220ENST00000570188 LYSTQ99698 3801 aa6.4□□□□□ -1.38
RBFOX1-220ENST00000570188 A0A0B4J2C4 111 aa6.39□□□□□ -1.39
RBFOX1-220ENST00000570188 TRBV30A0A0K0K1B3 111 aa6.39□□□□□ -1.39
RBFOX1-220ENST00000570188 PSCAO43653 123 aa6.39□□□□□ -1.39
RBFOX1-220ENST00000570188 Q6ZRU5 148 aa6.39□□□□□ -1.39
RBFOX1-220ENST00000570188 PPDPFQ9H3Y8 114 aa6.39□□□□□ -1.39
RBFOX1-220ENST00000570188 C6orf48Q9UBA6 75 aa6.39□□□□□ -1.39
RBFOX1-220ENST00000570188 ALMS1Q8TCU4 4167 aa6.39□□□□□ -1.39
RBFOX1-220ENST00000570188 H3BUT2 72 aa6.38□□□□□ -1.39
RBFOX1-220ENST00000570188 LECT2O14960 151 aa6.38□□□□□ -1.39
RBFOX1-220ENST00000570188 SYCNQ0VAF6 134 aa6.38□□□□□ -1.39
RBFOX1-220ENST00000570188 NAA38Q9BRA0 125 aaKnown RBP6.38□□□□□ -1.39
RBFOX1-220ENST00000570188 TENM2Q9NT68 2774 aa6.38□□□□□ -1.39
RBFOX1-220ENST00000570188 C3orf84H3BNL1 204 aa6.37□□□□□ -1.39
RBFOX1-220ENST00000570188 M0R2N4 97 aa6.37□□□□□ -1.39
RBFOX1-220ENST00000570188 CARD19Q96LW7 228 aa6.37□□□□□ -1.39
RBFOX1-220ENST00000570188 SND1-IT1Q9HBX3 110 aa6.37□□□□□ -1.39
RBFOX1-220ENST00000570188 PRO1854Q9UHT4 67 aa6.37□□□□□ -1.39
RBFOX1-220ENST00000570188 TSPAN13O95857 204 aa6.36□□□□□ -1.39
RBFOX1-220ENST00000570188 DNAH10Q8IVF4 4471 aa6.36□□□□□ -1.39
RBFOX1-220ENST00000570188 DNAH6Q9C0G6 4158 aa6.35□□□□□ -1.39
RBFOX1-220ENST00000570188 H7C2G1 150 aa6.35□□□□□ -1.39
RBFOX1-220ENST00000570188 LY6G6CO95867 125 aa6.35□□□□□ -1.39
RBFOX1-220ENST00000570188 RPL13AP40429 203 aaKnown RBP6.35□□□□□ -1.39
RBFOX1-220ENST00000570188 WFDC2Q14508 124 aa6.35□□□□□ -1.39
RBFOX1-220ENST00000570188 Q1RN00 199 aa6.35□□□□□ -1.39
RBFOX1-220ENST00000570188 TGP01266 2768 aa6.35□□□□□ -1.39
RBFOX1-220ENST00000570188 LOC107984156A0A0G2JMH3 177 aa6.34□□□□□ -1.39
RBFOX1-220ENST00000570188 A0A1W2PPM0 123 aa6.34□□□□□ -1.39
RBFOX1-220ENST00000570188 VAMP3Q15836 100 aa6.34□□□□□ -1.39
RBFOX1-220ENST00000570188 C14orf177Q52M58 125 aa6.34□□□□□ -1.39
RBFOX1-220ENST00000570188 ARL17AQ8IVW1 177 aa6.34□□□□□ -1.39
RBFOX1-220ENST00000570188 NDUFC2-KCTD14E9PQ53 114 aa6.33□□□□□ -1.4
RBFOX1-220ENST00000570188 SLPIP03973 132 aa6.33□□□□□ -1.4
RBFOX1-220ENST00000570188 FABP2P12104 132 aa6.33□□□□□ -1.4
RBFOX1-220ENST00000570188 Q6ZR54 194 aa6.33□□□□□ -1.4
RBFOX1-220ENST00000570188 Q6ZRN7 208 aaPredicted RBP6.33□□□□□ -1.4
RBFOX1-220ENST00000570188 KRTAP9-2Q9BYQ4 174 aa6.33□□□□□ -1.4
RBFOX1-220ENST00000570188 TRAV13-2A0A0B4J235 113 aa6.32□□□□□ -1.4
RBFOX1-220ENST00000570188 RPL18AQ02543 176 aaKnown RBP6.32□□□□□ -1.4
RBFOX1-220ENST00000570188 XAGE1AQ9HD64 81 aa6.32□□□□□ -1.4
RBFOX1-220ENST00000570188 IGKV2-28A0A075B6P5 120 aa6.31□□□□□ -1.4
RBFOX1-220ENST00000570188 NDUFC2O95298 119 aa6.31□□□□□ -1.4
RBFOX1-220ENST00000570188 IGKV2D-28P01615 120 aa6.31□□□□□ -1.4
RBFOX1-220ENST00000570188 PSMB2P49721 201 aa6.31□□□□□ -1.4
RBFOX1-220ENST00000570188 GAGE2EQ4V326 116 aa6.31□□□□□ -1.4
RBFOX1-220ENST00000570188 LYRM7Q5U5X0 104 aa6.31□□□□□ -1.4
RBFOX1-220ENST00000570188 LINC00337Q8N6G1 96 aa6.31□□□□□ -1.4
RBFOX1-220ENST00000570188 GAGE2DQ9UEU5 116 aa6.31□□□□□ -1.4
RBFOX1-220ENST00000570188 SPCS1Q9Y6A9 102 aa6.31□□□□□ -1.4
RBFOX1-220ENST00000570188 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.3□□□□□ -1.4
RBFOX1-220ENST00000570188 LRCOL1A6NCL2 159 aa6.3□□□□□ -1.4
RBFOX1-220ENST00000570188 NCR3O14931 201 aa6.3□□□□□ -1.4
RBFOX1-220ENST00000570188 TLX1NBP0CAT3 122 aa6.3□□□□□ -1.4
RBFOX1-220ENST00000570188 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
RBFOX1-220ENST00000570188 Q6ZRP5 223 aa6.3□□□□□ -1.4
RBFOX1-220ENST00000570188 LOC107984640A0A0U1RRK4 108 aa6.29□□□□□ -1.4
RBFOX1-220ENST00000570188 K7EP34 96 aa6.29□□□□□ -1.4
RBFOX1-220ENST00000570188 C1orf134Q5TEV5 83 aa6.29□□□□□ -1.4
RBFOX1-220ENST00000570188 GTF2H5Q6ZYL4 71 aa6.29□□□□□ -1.4
RBFOX1-220ENST00000570188 Q8NDZ9 215 aa6.29□□□□□ -1.4
RBFOX1-220ENST00000570188 OR13C6PQ8NH95 151 aa6.29□□□□□ -1.4
RBFOX1-220ENST00000570188 DNAH2Q9P225 4427 aa6.29□□□□□ -1.4
RBFOX1-220ENST00000570188 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
RBFOX1-220ENST00000570188 SCGB1C2P0DMR2 95 aa6.28□□□□□ -1.4
RBFOX1-220ENST00000570188 PRR3P79522 188 aaKnown RBP6.28□□□□□ -1.4
RBFOX1-220ENST00000570188 COX6CP09669 75 aa6.27□□□□□ -1.41
RBFOX1-220ENST00000570188 GAGE2BQ13066 116 aa6.27□□□□□ -1.41
RBFOX1-220ENST00000570188 UBE2V1Q13404 147 aa6.27□□□□□ -1.41
RBFOX1-220ENST00000570188 C9orf129Q5T035 196 aaKnown RBP6.27□□□□□ -1.41
RBFOX1-220ENST00000570188 Q8N814 137 aa6.27□□□□□ -1.41
RBFOX1-220ENST00000570188 DNAH17Q9UFH2 4485 aa6.27□□□□□ -1.41
RBFOX1-220ENST00000570188 A0A087WTM6 91 aa6.26□□□□□ -1.41
RBFOX1-220ENST00000570188 TRBV10-2A0A0K0K1G8 114 aa6.26□□□□□ -1.41
RBFOX1-220ENST00000570188 VPREB1P12018 145 aa6.26□□□□□ -1.41
RBFOX1-220ENST00000570188 S100A7L2Q5SY68 101 aa6.26□□□□□ -1.41
RBFOX1-220ENST00000570188 MPLKIPQ8TAP9 179 aa6.26□□□□□ -1.41
RBFOX1-220ENST00000570188 TCL1BO95988 128 aa6.25□□□□□ -1.41
RBFOX1-220ENST00000570188 RPL28P46779 137 aaKnown RBP6.25□□□□□ -1.41
RBFOX1-220ENST00000570188 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
RBFOX1-220ENST00000570188 SMIM11BQ8TCY0 68 aa6.25□□□□□ -1.41
RBFOX1-220ENST00000570188 TMEM126AQ9H061 195 aa6.25□□□□□ -1.41
RBFOX1-220ENST00000570188 PKIGQ9Y2B9 76 aa6.25□□□□□ -1.41
RBFOX1-220ENST00000570188 TRBV20-1A0A075B6N2 111 aa6.24□□□□□ -1.41
RBFOX1-220ENST00000570188 M0R378 163 aa6.24□□□□□ -1.41
RBFOX1-220ENST00000570188 NKAPP1Q8N9T2 125 aa6.24□□□□□ -1.41
RBFOX1-220ENST00000570188 KMT2AQ03164 3969 aa6.24□□□□□ -1.41
RBFOX1-220ENST00000570188 A0A096LNI7 61 aa6.23□□□□□ -1.41
RBFOX1-220ENST00000570188 TRBV10-3A0A0K0K1G6 114 aa6.23□□□□□ -1.41
RBFOX1-220ENST00000570188 ATXN8Q156A1 80 aa6.23□□□□□ -1.41
RBFOX1-220ENST00000570188 C9orf163Q8N9P6 203 aa6.23□□□□□ -1.41
RBFOX1-220ENST00000570188 CLEC2BQ92478 149 aa6.23□□□□□ -1.41
RBFOX1-220ENST00000570188 IGKV2-24A0A0C4DH68 120 aa6.22□□□□□ -1.41
RBFOX1-220ENST00000570188 FAM168BA1KXE4 195 aa6.22□□□□□ -1.41
RBFOX1-220ENST00000570188 C16orf90A8MZG2 172 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms