RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 C6orf48Q9UBA6 75 aa6.54□□□□□ -1.36
GDE1-205ENST00000569899 ERG28Q9UKR5 140 aa6.54□□□□□ -1.36
GDE1-205ENST00000569899 PFN2P35080 140 aa6.54□□□□□ -1.36
GDE1-205ENST00000569899 FXYD2P54710 66 aa6.54□□□□□ -1.36
GDE1-205ENST00000569899 TAL2Q16559 108 aa6.54□□□□□ -1.36
GDE1-205ENST00000569899 CEND1Q8N111 149 aa6.54□□□□□ -1.36
GDE1-205ENST00000569899 C2orf48Q96LS8 159 aa6.54□□□□□ -1.36
GDE1-205ENST00000569899 M0R143 59 aa6.53□□□□□ -1.36
GDE1-205ENST00000569899 LINC00158P58513 81 aa6.53□□□□□ -1.36
GDE1-205ENST00000569899 CIRBPQ14011 172 aaKnown RBP6.53□□□□□ -1.36
GDE1-205ENST00000569899 MIR7-3HGQ8N6C7 128 aa6.53□□□□□ -1.36
GDE1-205ENST00000569899 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.36
GDE1-205ENST00000569899 LRCOL1A6NCL2 159 aa6.52□□□□□ -1.37
GDE1-205ENST00000569899 TRBV30A0A0K0K1B3 111 aa6.51□□□□□ -1.37
GDE1-205ENST00000569899 SYCNQ0VAF6 134 aa6.51□□□□□ -1.37
GDE1-205ENST00000569899 C1orf134Q5TEV5 83 aa6.51□□□□□ -1.37
GDE1-205ENST00000569899 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
GDE1-205ENST00000569899 MUSTN1Q8IVN3 82 aa6.51□□□□□ -1.37
GDE1-205ENST00000569899 CARD19Q96LW7 228 aa6.51□□□□□ -1.37
GDE1-205ENST00000569899 HYDINQ4G0P3 5121 aa6.51□□□□□ -1.37
GDE1-205ENST00000569899 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.5□□□□□ -1.37
GDE1-205ENST00000569899 F8WDY8 70 aa6.5□□□□□ -1.37
GDE1-205ENST00000569899 Q6ZVH6 145 aa6.5□□□□□ -1.37
GDE1-205ENST00000569899 LINC00308Q8TCZ7 52 aa6.5□□□□□ -1.37
GDE1-205ENST00000569899 DNAH17Q9UFH2 4485 aa6.5□□□□□ -1.37
GDE1-205ENST00000569899 COX17Q14061 63 aa6.49□□□□□ -1.37
GDE1-205ENST00000569899 C14orf177Q52M58 125 aa6.49□□□□□ -1.37
GDE1-205ENST00000569899 NHP2Q9NX24 153 aaKnown RBP6.49□□□□□ -1.37
GDE1-205ENST00000569899 LCE6AA0A183 80 aa6.48□□□□□ -1.37
GDE1-205ENST00000569899 A4D1N5 150 aa6.48□□□□□ -1.37
GDE1-205ENST00000569899 K7ERJ3 54 aa6.48□□□□□ -1.37
GDE1-205ENST00000569899 IFITM1P13164 125 aa6.48□□□□□ -1.37
GDE1-205ENST00000569899 FRAS1Q86XX4 4008 aa6.47□□□□□ -1.37
GDE1-205ENST00000569899 A0A087WTM6 91 aa6.47□□□□□ -1.37
GDE1-205ENST00000569899 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
GDE1-205ENST00000569899 SND1-IT1Q9HBX3 110 aa6.47□□□□□ -1.37
GDE1-205ENST00000569899 CNBPP62633 177 aaKnown RBP6.47□□□□□ -1.37
GDE1-205ENST00000569899 Q8N814 137 aa6.47□□□□□ -1.37
GDE1-205ENST00000569899 A6NDN8 102 aa6.46□□□□□ -1.38
GDE1-205ENST00000569899 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
GDE1-205ENST00000569899 RTL8CO15255 209 aa6.46□□□□□ -1.38
GDE1-205ENST00000569899 RPL18AQ02543 176 aaKnown RBP6.46□□□□□ -1.38
GDE1-205ENST00000569899 Q6ZRP5 223 aa6.46□□□□□ -1.38
GDE1-205ENST00000569899 XAGE1AQ9HD64 81 aa6.46□□□□□ -1.38
GDE1-205ENST00000569899 A0A1B0GWB2 263 aa6.45□□□□□ -1.38
GDE1-205ENST00000569899 GAGE2EQ4V326 116 aa6.45□□□□□ -1.38
GDE1-205ENST00000569899 COPS9Q8WXC6 57 aa6.45□□□□□ -1.38
GDE1-205ENST00000569899 GAGE2DQ9UEU5 116 aa6.45□□□□□ -1.38
GDE1-205ENST00000569899 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.44□□□□□ -1.38
GDE1-205ENST00000569899 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
GDE1-205ENST00000569899 CFC1BP0CG36 223 aa6.44□□□□□ -1.38
GDE1-205ENST00000569899 CFC1P0CG37 223 aa6.44□□□□□ -1.38
GDE1-205ENST00000569899 COL5A1-AS1Q5SY13 56 aa6.44□□□□□ -1.38
GDE1-205ENST00000569899 Q8NDZ9 215 aa6.44□□□□□ -1.38
GDE1-205ENST00000569899 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
GDE1-205ENST00000569899 PPDPFQ9H3Y8 114 aa6.44□□□□□ -1.38
GDE1-205ENST00000569899 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
GDE1-205ENST00000569899 FUSP35637 526 aaKnown RBP eCLIP6.43□□□□□ -1.38
GDE1-205ENST00000569899 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
GDE1-205ENST00000569899 RAB37Q96AX2 223 aa6.43□□□□□ -1.38
GDE1-205ENST00000569899 A0A0B4J2C4 111 aa6.43□□□□□ -1.38
GDE1-205ENST00000569899 LOC107984640A0A0U1RRK4 108 aa6.43□□□□□ -1.38
GDE1-205ENST00000569899 TAX1BP3O14907 124 aa6.43□□□□□ -1.38
GDE1-205ENST00000569899 LINC01620Q4KN68 170 aa6.43□□□□□ -1.38
GDE1-205ENST00000569899 FAT2Q9NYQ8 4349 aa6.42□□□□□ -1.38
GDE1-205ENST00000569899 IGKV2-28A0A075B6P5 120 aa6.42□□□□□ -1.38
GDE1-205ENST00000569899 IGKV2D-28P01615 120 aa6.42□□□□□ -1.38
GDE1-205ENST00000569899 GAGE2BQ13066 116 aa6.42□□□□□ -1.38
GDE1-205ENST00000569899 C9orf129Q5T035 196 aaKnown RBP6.42□□□□□ -1.38
GDE1-205ENST00000569899 A0A096LNI7 61 aa6.41□□□□□ -1.38
GDE1-205ENST00000569899 NCR3O14931 201 aa6.41□□□□□ -1.38
GDE1-205ENST00000569899 LBHQ53QV2 105 aaPredicted RBP6.41□□□□□ -1.38
GDE1-205ENST00000569899 C9orf163Q8N9P6 203 aa6.41□□□□□ -1.38
GDE1-205ENST00000569899 NAA38Q9BRA0 125 aaKnown RBP6.41□□□□□ -1.38
GDE1-205ENST00000569899 RPL13AP40429 203 aaKnown RBP6.4□□□□□ -1.38
GDE1-205ENST00000569899 PRR3P79522 188 aaKnown RBP6.4□□□□□ -1.38
GDE1-205ENST00000569899 LINC00337Q8N6G1 96 aa6.4□□□□□ -1.38
GDE1-205ENST00000569899 DNAH11Q96DT5 4516 aa6.4□□□□□ -1.38
GDE1-205ENST00000569899 RYR2Q92736 4967 aa6.4□□□□□ -1.39
GDE1-205ENST00000569899 IGKV2-24A0A0C4DH68 120 aa6.39□□□□□ -1.39
GDE1-205ENST00000569899 NDUFC2O95298 119 aa6.39□□□□□ -1.39
GDE1-205ENST00000569899 TSPAN13O95857 204 aa6.39□□□□□ -1.39
GDE1-205ENST00000569899 PRO1854Q9UHT4 67 aa6.39□□□□□ -1.39
GDE1-205ENST00000569899 KMT2CQ8NEZ4 4911 aaKnown RBP6.39□□□□□ -1.39
GDE1-205ENST00000569899 H7C2G1 150 aa6.39□□□□□ -1.39
GDE1-205ENST00000569899 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
GDE1-205ENST00000569899 VPREB1P12018 145 aa6.39□□□□□ -1.39
GDE1-205ENST00000569899 SERTAD4-AS1Q5TG53 156 aa6.39□□□□□ -1.39
GDE1-205ENST00000569899 FAM168BA1KXE4 195 aa6.38□□□□□ -1.39
GDE1-205ENST00000569899 C16orf90A8MZG2 172 aa6.38□□□□□ -1.39
GDE1-205ENST00000569899 PRYO14603 147 aa6.38□□□□□ -1.39
GDE1-205ENST00000569899 HECTD4Q9Y4D8 3996 aa6.38□□□□□ -1.39
GDE1-205ENST00000569899 IGLV5-52A0A0A0MRZ9 124 aa6.37□□□□□ -1.39
GDE1-205ENST00000569899 H3BUT2 72 aa6.37□□□□□ -1.39
GDE1-205ENST00000569899 Q1RN00 199 aa6.37□□□□□ -1.39
GDE1-205ENST00000569899 DNAH5Q8TE73 4624 aa6.37□□□□□ -1.39
GDE1-205ENST00000569899 TRAV13-2A0A0B4J235 113 aa6.36□□□□□ -1.39
GDE1-205ENST00000569899 A0A1B0GV90 55 aa6.36□□□□□ -1.39
GDE1-205ENST00000569899 SDIM1Q6ZPB5 146 aa6.36□□□□□ -1.39
GDE1-205ENST00000569899 KRTAP7-1Q8IUC3 87 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms