RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 IGKV2-30P06310 120 aa3.09□□□□□ -1.91
CNOT1-219ENST00000569882 HERVK_113P63121 156 aa3.09□□□□□ -1.91
CNOT1-219ENST00000569882 SDIM1Q6ZPB5 146 aa3.09□□□□□ -1.91
CNOT1-219ENST00000569882 Q6ZRU5 148 aa3.09□□□□□ -1.91
CNOT1-219ENST00000569882 C2orf48Q96LS8 159 aa3.09□□□□□ -1.91
CNOT1-219ENST00000569882 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
CNOT1-219ENST00000569882 PYGO1Q9Y3Y4 419 aa3.09□□□□□ -1.91
CNOT1-219ENST00000569882 A0A096LNI7 61 aa3.08□□□□□ -1.92
CNOT1-219ENST00000569882 FAM236DA0A1B0GTK5 79 aa3.08□□□□□ -1.92
CNOT1-219ENST00000569882 H3BRM9 83 aa3.08□□□□□ -1.92
CNOT1-219ENST00000569882 PRYO14603 147 aa3.08□□□□□ -1.92
CNOT1-219ENST00000569882 FAM236CP0DP71 79 aa3.08□□□□□ -1.92
CNOT1-219ENST00000569882 BATFQ16520 125 aa3.08□□□□□ -1.92
CNOT1-219ENST00000569882 COA6Q5JTJ3 125 aaKnown RBP3.08□□□□□ -1.92
CNOT1-219ENST00000569882 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
CNOT1-219ENST00000569882 SPACA4Q8TDM5 124 aa3.08□□□□□ -1.92
CNOT1-219ENST00000569882 TOMM6Q96B49 74 aa3.08□□□□□ -1.92
CNOT1-219ENST00000569882 TIMM17AQ99595 171 aa3.08□□□□□ -1.92
CNOT1-219ENST00000569882 DNAH2Q9P225 4427 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 FAT2Q9NYQ8 4349 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 A0A087WZ39 114 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 A0A0J9YXV3 536 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 HBDP02042 147 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 FABP4P15090 132 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 UBE2D1P51668 147 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 LINC00242Q5T6M2 205 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 ZC2HC1BQ5TFG8 222 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 Q5XG85 94 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 BAGE3Q86Y29 109 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 FLG2Q5D862 2391 aaPredicted RBP3.07□□□□□ -1.92
CNOT1-219ENST00000569882 KIAA1109Q2LD37 5005 aa3.07□□□□□ -1.92
CNOT1-219ENST00000569882 IGHV3OR16-9A0A0B4J2B5 98 aa3.06□□□□□ -1.92
CNOT1-219ENST00000569882 IGIPA6NJ69 53 aa3.06□□□□□ -1.92
CNOT1-219ENST00000569882 CCDC179H3BU77 68 aa3.06□□□□□ -1.92
CNOT1-219ENST00000569882 PANO1I0J062 215 aa3.06□□□□□ -1.92
CNOT1-219ENST00000569882 CXCL5P42830 114 aa3.06□□□□□ -1.92
CNOT1-219ENST00000569882 UBE2BP63146 152 aa3.06□□□□□ -1.92
CNOT1-219ENST00000569882 Q6Q795 121 aa3.06□□□□□ -1.92
CNOT1-219ENST00000569882 YPEL4Q96NS1 127 aa3.06□□□□□ -1.92
CNOT1-219ENST00000569882 MRPL35Q9NZE8 188 aaKnown RBP3.06□□□□□ -1.92
CNOT1-219ENST00000569882 PLAC8Q9NZF1 115 aa3.06□□□□□ -1.92
CNOT1-219ENST00000569882 DNAH17Q9UFH2 4485 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 PKD1P98161 4303 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 TRBV30A0A0K0K1B3 111 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 A0A0U1RQV1 116 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 FAM240AA0A1B0GVK7 77 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST1H2BKO60814 126 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST1H2BJP06899 126 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 SPINK8P0C7L1 97 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST1H2BOP23527 126 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST1H2BBP33778 126 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST1H2BDP58876 126 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST1H2BCP62807 126 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 CIRBPQ14011 172 aaKnown RBP3.05□□□□□ -1.92
CNOT1-219ENST00000569882 PMCHL1Q16048 86 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST2H2BEQ16778 126 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 C9orf116Q5BN46 136 aaPredicted RBP3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.05□□□□□ -1.92
CNOT1-219ENST00000569882 TMEM170BQ5T4T1 132 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 C2orf82Q6UX34 121 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HRCT1Q6UXD1 115 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 UNQ6190/PRO20217Q6UXQ8 127 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 Q6ZRP5 223 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 Q8IZM0 81 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 C18orf32Q8TCD1 76 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST1H2BHQ93079 126 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 AMELXQ99217 191 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST1H2BNQ99877 126 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 HIST1H2BMQ99879 126 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 UQCR10Q9UDW1 63 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 CDKN2A-AS1Q9UH64 79 aa3.05□□□□□ -1.92
CNOT1-219ENST00000569882 NDUFC2-KCTD14E9PQ53 114 aa3.04□□□□□ -1.92
CNOT1-219ENST00000569882 F8VRH5 84 aa3.04□□□□□ -1.92
CNOT1-219ENST00000569882 NDUFC2O95298 119 aa3.04□□□□□ -1.92
CNOT1-219ENST00000569882 MEIG1Q5JSS6 88 aa3.04□□□□□ -1.92
CNOT1-219ENST00000569882 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
CNOT1-219ENST00000569882 REG3GQ6UW15 175 aa3.04□□□□□ -1.92
CNOT1-219ENST00000569882 LINC00173Q6ZV60 143 aa3.04□□□□□ -1.92
CNOT1-219ENST00000569882 MRPL55Q7Z7F7 128 aaKnown RBP3.04□□□□□ -1.92
CNOT1-219ENST00000569882 COX7B2Q8TF08 81 aa3.04□□□□□ -1.92
CNOT1-219ENST00000569882 CHCHD1Q96BP2 118 aaKnown RBP3.04□□□□□ -1.92
CNOT1-219ENST00000569882 NAA38Q9BRA0 125 aaKnown RBP3.04□□□□□ -1.92
CNOT1-219ENST00000569882 VAMP8Q9BV40 100 aa3.04□□□□□ -1.92
CNOT1-219ENST00000569882 C6orf48Q9UBA6 75 aa3.04□□□□□ -1.92
CNOT1-219ENST00000569882 DMBT1Q9UGM3 2413 aaPredicted RBP3.03□□□□□ -1.92
CNOT1-219ENST00000569882 TAX1BP3O14907 124 aa3.03□□□□□ -1.92
CNOT1-219ENST00000569882 NDUFV3P56181 108 aaKnown RBP3.03□□□□□ -1.92
CNOT1-219ENST00000569882 PRR3P79522 188 aaKnown RBP3.03□□□□□ -1.92
CNOT1-219ENST00000569882 C1orf137Q5JT78 98 aa3.03□□□□□ -1.92
CNOT1-219ENST00000569882 C10orf25Q5T742 122 aa3.03□□□□□ -1.92
CNOT1-219ENST00000569882 Q6ZVH6 145 aa3.03□□□□□ -1.92
CNOT1-219ENST00000569882 NKAPP1Q8N9T2 125 aa3.03□□□□□ -1.92
CNOT1-219ENST00000569882 FAM104AQ969W3 186 aa3.03□□□□□ -1.92
CNOT1-219ENST00000569882 SPANXDQ9BXN6 97 aa3.03□□□□□ -1.92
CNOT1-219ENST00000569882 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
CNOT1-219ENST00000569882 SMIM1B2RUZ4 78 aa3.02□□□□□ -1.93
CNOT1-219ENST00000569882 J3QQQ9 107 aa3.02□□□□□ -1.93
CNOT1-219ENST00000569882 TRGC2P03986 189 aa3.02□□□□□ -1.93
CNOT1-219ENST00000569882 PFN2P35080 140 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms