RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 IGHV3-30P01768 117 aa7.32□□□□□ -1.24
CHRFAM7A-206ENST00000569278 IGHV3-33P01772 117 aa7.32□□□□□ -1.24
CHRFAM7A-206ENST00000569278 IGHV3-30-5P0DP03 117 aa7.32□□□□□ -1.24
CHRFAM7A-206ENST00000569278 FABP2P12104 132 aa7.32□□□□□ -1.24
CHRFAM7A-206ENST00000569278 FXYD2P54710 66 aa7.32□□□□□ -1.24
CHRFAM7A-206ENST00000569278 RBX1P62877 108 aa7.32□□□□□ -1.24
CHRFAM7A-206ENST00000569278 LINC00959A0A1B0GUT2 108 aa7.31□□□□□ -1.24
CHRFAM7A-206ENST00000569278 LECT2O14960 151 aa7.31□□□□□ -1.24
CHRFAM7A-206ENST00000569278 TRAV8-4A0A0B4J246 113 aa7.3□□□□□ -1.24
CHRFAM7A-206ENST00000569278 GAGE10A6NGK3 116 aa7.3□□□□□ -1.24
CHRFAM7A-206ENST00000569278 COX6A2Q02221 97 aa7.3□□□□□ -1.24
CHRFAM7A-206ENST00000569278 CD164L2Q6UWJ8 174 aa7.3□□□□□ -1.24
CHRFAM7A-206ENST00000569278 NHP2Q9NX24 153 aaKnown RBP7.3□□□□□ -1.24
CHRFAM7A-206ENST00000569278 A0A0B4J2C4 111 aa7.29□□□□□ -1.24
CHRFAM7A-206ENST00000569278 A0A1W2PPM0 123 aa7.29□□□□□ -1.24
CHRFAM7A-206ENST00000569278 SMIM1B2RUZ4 78 aa7.29□□□□□ -1.24
CHRFAM7A-206ENST00000569278 SPINK8P0C7L1 97 aa7.29□□□□□ -1.24
CHRFAM7A-206ENST00000569278 TSPEAR-AS2P59090 65 aa7.29□□□□□ -1.24
CHRFAM7A-206ENST00000569278 RNASE13Q5GAN3 156 aaKnown RBP7.29□□□□□ -1.24
CHRFAM7A-206ENST00000569278 IGLV4-60A0A075B6I1 120 aa7.28□□□□□ -1.24
CHRFAM7A-206ENST00000569278 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.28□□□□□ -1.24
CHRFAM7A-206ENST00000569278 TRAV8-3A0A0A6YYJ7 113 aa7.28□□□□□ -1.24
CHRFAM7A-206ENST00000569278 CXCL5P42830 114 aa7.28□□□□□ -1.24
CHRFAM7A-206ENST00000569278 PRO1854Q9UHT4 67 aa7.28□□□□□ -1.24
CHRFAM7A-206ENST00000569278 TRBV20-1A0A075B6N2 111 aa7.27□□□□□ -1.25
CHRFAM7A-206ENST00000569278 H3BUT2 72 aa7.27□□□□□ -1.25
CHRFAM7A-206ENST00000569278 APOMO95445 188 aa7.27□□□□□ -1.25
CHRFAM7A-206ENST00000569278 PRSS2P07478 247 aa7.27□□□□□ -1.25
CHRFAM7A-206ENST00000569278 MIAQ16674 131 aa7.27□□□□□ -1.25
CHRFAM7A-206ENST00000569278 ZNF625Q96I27 306 aaPredicted RBP7.27□□□□□ -1.25
CHRFAM7A-206ENST00000569278 MUSTN1Q8IVN3 82 aa7.26□□□□□ -1.25
CHRFAM7A-206ENST00000569278 Q8IZM0 81 aa7.26□□□□□ -1.25
CHRFAM7A-206ENST00000569278 CIRBP-AS1Q8TBR5 109 aa7.26□□□□□ -1.25
CHRFAM7A-206ENST00000569278 COX7B2Q8TF08 81 aa7.26□□□□□ -1.25
CHRFAM7A-206ENST00000569278 RAB37Q96AX2 223 aa7.26□□□□□ -1.25
CHRFAM7A-206ENST00000569278 LITAFQ99732 161 aa7.26□□□□□ -1.25
CHRFAM7A-206ENST00000569278 PRR34Q9NV39 138 aa7.26□□□□□ -1.25
CHRFAM7A-206ENST00000569278 IGHV3-64A0A075B6Q5 118 aa7.25□□□□□ -1.25
CHRFAM7A-206ENST00000569278 F8WDY8 70 aa7.25□□□□□ -1.25
CHRFAM7A-206ENST00000569278 K7EP34 96 aa7.25□□□□□ -1.25
CHRFAM7A-206ENST00000569278 REG3AQ06141 175 aa7.25□□□□□ -1.25
CHRFAM7A-206ENST00000569278 COX17Q14061 63 aa7.25□□□□□ -1.25
CHRFAM7A-206ENST00000569278 C6orf226Q5I0X4 101 aa7.25□□□□□ -1.25
CHRFAM7A-206ENST00000569278 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
CHRFAM7A-206ENST00000569278 SERTAD4-AS1Q5TG53 156 aa7.25□□□□□ -1.25
CHRFAM7A-206ENST00000569278 ERG28Q9UKR5 140 aa7.25□□□□□ -1.25
CHRFAM7A-206ENST00000569278 A4D1N5 150 aa7.24□□□□□ -1.25
CHRFAM7A-206ENST00000569278 F8W1H4 67 aa7.24□□□□□ -1.25
CHRFAM7A-206ENST00000569278 COX7A2LO14548 114 aa7.24□□□□□ -1.25
CHRFAM7A-206ENST00000569278 COX6CP09669 75 aa7.24□□□□□ -1.25
CHRFAM7A-206ENST00000569278 CFC1BP0CG36 223 aa7.24□□□□□ -1.25
CHRFAM7A-206ENST00000569278 CFC1P0CG37 223 aa7.24□□□□□ -1.25
CHRFAM7A-206ENST00000569278 MT1HL1P0DM35 61 aa7.24□□□□□ -1.25
CHRFAM7A-206ENST00000569278 LCE4AQ5TA78 99 aa7.24□□□□□ -1.25
CHRFAM7A-206ENST00000569278 SPCS1Q9Y6A9 102 aa7.24□□□□□ -1.25
CHRFAM7A-206ENST00000569278 OXTP01178 125 aa7.23□□□□□ -1.25
CHRFAM7A-206ENST00000569278 ANGP03950 147 aaKnown RBP7.23□□□□□ -1.25
CHRFAM7A-206ENST00000569278 LINC00269Q8N2A0 174 aa7.23□□□□□ -1.25
CHRFAM7A-206ENST00000569278 CHCHD10Q8WYQ3 142 aaPredicted RBP7.22□□□□□ -1.25
CHRFAM7A-206ENST00000569278 LOC107984156A0A0G2JMH3 177 aa7.21□□□□□ -1.26
CHRFAM7A-206ENST00000569278 TRBV30A0A0K0K1B3 111 aa7.21□□□□□ -1.26
CHRFAM7A-206ENST00000569278 MALP21145 153 aa7.21□□□□□ -1.26
CHRFAM7A-206ENST00000569278 ARL17AQ8IVW1 177 aa7.21□□□□□ -1.26
CHRFAM7A-206ENST00000569278 LINC00308Q8TCZ7 52 aa7.21□□□□□ -1.26
CHRFAM7A-206ENST00000569278 CRPP02741 224 aa7.2□□□□□ -1.26
CHRFAM7A-206ENST00000569278 CKS1BP61024 79 aa7.2□□□□□ -1.26
CHRFAM7A-206ENST00000569278 ADAMTSL4-AS1Q5T5F5 129 aa7.2□□□□□ -1.26
CHRFAM7A-206ENST00000569278 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
CHRFAM7A-206ENST00000569278 TRAV13-2A0A0B4J235 113 aa7.19□□□□□ -1.26
CHRFAM7A-206ENST00000569278 IGKV3OR2-268A0A0C4DH90 116 aa7.19□□□□□ -1.26
CHRFAM7A-206ENST00000569278 PANO1I0J062 215 aa7.19□□□□□ -1.26
CHRFAM7A-206ENST00000569278 SCGB1C2P0DMR2 95 aa7.19□□□□□ -1.26
CHRFAM7A-206ENST00000569278 XCL1P47992 114 aa7.19□□□□□ -1.26
CHRFAM7A-206ENST00000569278 C5orf38Q86SI9 138 aa7.19□□□□□ -1.26
CHRFAM7A-206ENST00000569278 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
CHRFAM7A-206ENST00000569278 K7ERJ3 54 aa7.18□□□□□ -1.26
CHRFAM7A-206ENST00000569278 TOMM7Q9P0U1 55 aa7.18□□□□□ -1.26
CHRFAM7A-206ENST00000569278 IGKV2D-24A0A075B6R9 120 aa7.17□□□□□ -1.26
CHRFAM7A-206ENST00000569278 GVQW2A0A096LPI5 108 aaPredicted RBP7.17□□□□□ -1.26
CHRFAM7A-206ENST00000569278 M0QXV9 152 aa7.17□□□□□ -1.26
CHRFAM7A-206ENST00000569278 TSPAN13O95857 204 aa7.17□□□□□ -1.26
CHRFAM7A-206ENST00000569278 FOXI1Q12951 378 aa7.17□□□□□ -1.26
CHRFAM7A-206ENST00000569278 KLK12Q9UKR0 248 aa7.17□□□□□ -1.26
CHRFAM7A-206ENST00000569278 KRTAP9-7A8MTY7 169 aa7.16□□□□□ -1.26
CHRFAM7A-206ENST00000569278 PSMB2P49721 201 aa7.16□□□□□ -1.26
CHRFAM7A-206ENST00000569278 LINC00158P58513 81 aa7.16□□□□□ -1.26
CHRFAM7A-206ENST00000569278 KIAA0087Q14695 138 aa7.16□□□□□ -1.26
CHRFAM7A-206ENST00000569278 J3QR89 54 aa7.15□□□□□ -1.26
CHRFAM7A-206ENST00000569278 NDUFC2O95298 119 aa7.15□□□□□ -1.26
CHRFAM7A-206ENST00000569278 RPL37AP61513 92 aaKnown RBP7.15□□□□□ -1.26
CHRFAM7A-206ENST00000569278 ENHOQ6UWT2 76 aa7.15□□□□□ -1.26
CHRFAM7A-206ENST00000569278 UBE2WQ96B02 151 aa7.15□□□□□ -1.26
CHRFAM7A-206ENST00000569278 RMI2Q96E14 147 aa7.15□□□□□ -1.26
CHRFAM7A-206ENST00000569278 LINC01600Q96MT4 127 aa7.15□□□□□ -1.26
CHRFAM7A-206ENST00000569278 GAGE12HA6NDE8 117 aa7.14□□□□□ -1.27
CHRFAM7A-206ENST00000569278 K7ERU9 68 aa7.14□□□□□ -1.27
CHRFAM7A-206ENST00000569278 ATXN8Q156A1 80 aa7.14□□□□□ -1.27
CHRFAM7A-206ENST00000569278 Q1RN00 199 aa7.14□□□□□ -1.27
CHRFAM7A-206ENST00000569278 KRTAP26-1Q6PEX3 210 aa7.14□□□□□ -1.27
CHRFAM7A-206ENST00000569278 C2orf48Q96LS8 159 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms