RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 Q8IZM0 81 aa3.11□□□□□ -1.91
CDH13-211ENST00000568770 LINC01561Q8N1V8 128 aa3.11□□□□□ -1.91
CDH13-211ENST00000568770 SMIM2Q9BVW6 85 aa3.11□□□□□ -1.91
CDH13-211ENST00000568770 LINC00862A6NCI5 91 aa3.1□□□□□ -1.91
CDH13-211ENST00000568770 F8VRH5 84 aa3.1□□□□□ -1.91
CDH13-211ENST00000568770 CKS2P33552 79 aa3.1□□□□□ -1.91
CDH13-211ENST00000568770 FAM104BQ5XKR9 115 aa3.1□□□□□ -1.91
CDH13-211ENST00000568770 Q6ZN92 141 aa3.1□□□□□ -1.91
CDH13-211ENST00000568770 TEX43Q6ZNM6 134 aa3.1□□□□□ -1.91
CDH13-211ENST00000568770 FAM19A1Q7Z5A9 133 aa3.1□□□□□ -1.91
CDH13-211ENST00000568770 PLEKHB2Q96CS7 222 aa3.1□□□□□ -1.91
CDH13-211ENST00000568770 TMEM141Q96I45 108 aa3.1□□□□□ -1.91
CDH13-211ENST00000568770 A0A1B0GVG6 124 aa3.09□□□□□ -1.91
CDH13-211ENST00000568770 SCO1O75880 301 aa3.09□□□□□ -1.91
CDH13-211ENST00000568770 TAGLN2P37802 199 aaKnown RBP3.09□□□□□ -1.91
CDH13-211ENST00000568770 CEBPGP53567 150 aa3.09□□□□□ -1.91
CDH13-211ENST00000568770 DAND5Q8N907 189 aa3.09□□□□□ -1.91
CDH13-211ENST00000568770 NKAPP1Q8N9T2 125 aa3.09□□□□□ -1.91
CDH13-211ENST00000568770 EIF5A2Q9GZV4 153 aaKnown RBP3.09□□□□□ -1.91
CDH13-211ENST00000568770 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 TMEM238C9JI98 176 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 D6R8Y8 96 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 TMEM250H0YL14 139 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 M0R2T5 61 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 NPYP01303 97 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 RAB5AP20339 215 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 LINC01551Q86U37 167 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 CBLN2Q8IUK8 224 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 C2orf88Q9BSF0 95 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 TMEM126AQ9H061 195 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 OSTCQ9NRP0 149 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 NAT8BQ9UHF3 227 aa3.08□□□□□ -1.92
CDH13-211ENST00000568770 SPINK1P00995 79 aa3.07□□□□□ -1.92
CDH13-211ENST00000568770 RAB5BP61020 215 aa3.07□□□□□ -1.92
CDH13-211ENST00000568770 FAM19A3Q7Z5A8 133 aa3.07□□□□□ -1.92
CDH13-211ENST00000568770 SPRR4Q96PI1 79 aa3.07□□□□□ -1.92
CDH13-211ENST00000568770 SMIM7Q9BQ49 75 aa3.07□□□□□ -1.92
CDH13-211ENST00000568770 VCX2Q9H322 139 aa3.07□□□□□ -1.92
CDH13-211ENST00000568770 CDKN2A-AS1Q9UH64 79 aa3.07□□□□□ -1.92
CDH13-211ENST00000568770 NDUFA12Q9UI09 145 aa3.07□□□□□ -1.92
CDH13-211ENST00000568770 V9GYV3 84 aa3.07□□□□□ -1.92
CDH13-211ENST00000568770 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
CDH13-211ENST00000568770 IGLV8-61A0A075B6I0 122 aa3.06□□□□□ -1.92
CDH13-211ENST00000568770 M0R378 163 aa3.06□□□□□ -1.92
CDH13-211ENST00000568770 CXCL5P42830 114 aa3.06□□□□□ -1.92
CDH13-211ENST00000568770 HERVK_113P63121 156 aa3.06□□□□□ -1.92
CDH13-211ENST00000568770 FAM74A3Q4VXF1 159 aa3.06□□□□□ -1.92
CDH13-211ENST00000568770 C2orf66Q6UXQ4 117 aa3.06□□□□□ -1.92
CDH13-211ENST00000568770 AMELXQ99217 191 aa3.06□□□□□ -1.92
CDH13-211ENST00000568770 HIGD2AQ9BW72 106 aa3.06□□□□□ -1.92
CDH13-211ENST00000568770 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
CDH13-211ENST00000568770 SSPOA2VEC9 5147 aa3.06□□□□□ -1.92
CDH13-211ENST00000568770 USH2AO75445 5202 aa3.05□□□□□ -1.92
CDH13-211ENST00000568770 A0A1B0GW15 77 aa3.05□□□□□ -1.92
CDH13-211ENST00000568770 SMIM27A0A1W2PRY6 76 aa3.05□□□□□ -1.92
CDH13-211ENST00000568770 PPBPP02775 128 aa3.05□□□□□ -1.92
CDH13-211ENST00000568770 CXCL6P80162 114 aa3.05□□□□□ -1.92
CDH13-211ENST00000568770 PCOTHQ58A44 107 aa3.05□□□□□ -1.92
CDH13-211ENST00000568770 COX7B2Q8TF08 81 aa3.05□□□□□ -1.92
CDH13-211ENST00000568770 GEMIN7Q9H840 131 aaKnown RBP3.05□□□□□ -1.92
CDH13-211ENST00000568770 BATF3Q9NR55 127 aa3.05□□□□□ -1.92
CDH13-211ENST00000568770 CYSLTR1Q9Y271 337 aa3.05□□□□□ -1.92
CDH13-211ENST00000568770 LOC389332A0A1B0GUA5 103 aa3.04□□□□□ -1.92
CDH13-211ENST00000568770 IGIPA6NJ69 53 aa3.04□□□□□ -1.92
CDH13-211ENST00000568770 F8W036 122 aa3.04□□□□□ -1.92
CDH13-211ENST00000568770 MRPL54Q6P161 138 aaKnown RBP3.04□□□□□ -1.92
CDH13-211ENST00000568770 ORMDL3Q8N138 153 aa3.04□□□□□ -1.92
CDH13-211ENST00000568770 FAM19A2Q8N3H0 131 aa3.04□□□□□ -1.92
CDH13-211ENST00000568770 PRELID3AQ96N28 172 aa3.04□□□□□ -1.92
CDH13-211ENST00000568770 ZNF706Q9Y5V0 76 aaPredicted RBP3.04□□□□□ -1.92
CDH13-211ENST00000568770 SLC25A20O43772 301 aa3.03□□□□□ -1.92
CDH13-211ENST00000568770 PFN2P35080 140 aa3.03□□□□□ -1.92
CDH13-211ENST00000568770 RPS29P62273 56 aaKnown RBP3.03□□□□□ -1.92
CDH13-211ENST00000568770 SEC11AP67812 179 aa3.03□□□□□ -1.92
CDH13-211ENST00000568770 RGS21Q2M5E4 152 aa3.03□□□□□ -1.92
CDH13-211ENST00000568770 PDZD11Q5EBL8 140 aa3.03□□□□□ -1.92
CDH13-211ENST00000568770 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
CDH13-211ENST00000568770 TMEM136Q6ZRR5 245 aa3.03□□□□□ -1.92
CDH13-211ENST00000568770 FCGBPQ9Y6R7 5405 aaPredicted RBP3.02□□□□□ -1.93
CDH13-211ENST00000568770 A0A1B0GXF2 115 aa3.02□□□□□ -1.93
CDH13-211ENST00000568770 ATP5LO75964 103 aa3.02□□□□□ -1.93
CDH13-211ENST00000568770 S100A8P05109 93 aa3.02□□□□□ -1.93
CDH13-211ENST00000568770 RAB14P61106 215 aa3.02□□□□□ -1.93
CDH13-211ENST00000568770 RPL23P62829 140 aaKnown RBP3.02□□□□□ -1.93
CDH13-211ENST00000568770 SLC51BQ86UW2 128 aa3.02□□□□□ -1.93
CDH13-211ENST00000568770 Q8NDZ9 215 aa3.02□□□□□ -1.93
CDH13-211ENST00000568770 SND1-IT1Q9HBX3 110 aa3.02□□□□□ -1.93
CDH13-211ENST00000568770 TINCRA0A1B0GVN0 87 aa3.01□□□□□ -1.93
CDH13-211ENST00000568770 SRP19P09132 144 aaKnown RBP3.01□□□□□ -1.93
CDH13-211ENST00000568770 SPINK8P0C7L1 97 aa3.01□□□□□ -1.93
CDH13-211ENST00000568770 MOBPQ13875 183 aa3.01□□□□□ -1.93
CDH13-211ENST00000568770 ADIRFQ15847 76 aa3.01□□□□□ -1.93
CDH13-211ENST00000568770 ORMDL2Q53FV1 153 aa3.01□□□□□ -1.93
CDH13-211ENST00000568770 COX6B2Q6YFQ2 88 aa3.01□□□□□ -1.93
CDH13-211ENST00000568770 Q8N8P6 123 aa3.01□□□□□ -1.93
CDH13-211ENST00000568770 MAP1LC3AQ9H492 121 aa3.01□□□□□ -1.93
CDH13-211ENST00000568770 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
CDH13-211ENST00000568770 C9orf92A6NGG3 77 aa3□□□□□ -1.93
CDH13-211ENST00000568770 KRTAP4-16G5E9R7 235 aaPredicted RBP3□□□□□ -1.93
CDH13-211ENST00000568770 LINC00483Q53H64 154 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms