RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 IBA57-AS1B1ANH7 110 aa7.71□□□□□ -1.18
VPS9D1-207ENST00000568691 PSCAO43653 123 aa7.71□□□□□ -1.18
VPS9D1-207ENST00000568691 PRSS2P07478 247 aa7.71□□□□□ -1.18
VPS9D1-207ENST00000568691 MALP21145 153 aa7.71□□□□□ -1.18
VPS9D1-207ENST00000568691 IFITM1P13164 125 aa7.7□□□□□ -1.18
VPS9D1-207ENST00000568691 SRSF9Q13242 221 aaKnown RBP eCLIP7.7□□□□□ -1.18
VPS9D1-207ENST00000568691 BATFQ16520 125 aa7.7□□□□□ -1.18
VPS9D1-207ENST00000568691 KRTAP26-1Q6PEX3 210 aa7.7□□□□□ -1.18
VPS9D1-207ENST00000568691 LITAFQ99732 161 aa7.7□□□□□ -1.18
VPS9D1-207ENST00000568691 MUC2Q02817 5179 aa7.69□□□□□ -1.18
VPS9D1-207ENST00000568691 F8WDY8 70 aa7.69□□□□□ -1.18
VPS9D1-207ENST00000568691 PTTG1IPP53801 180 aa7.69□□□□□ -1.18
VPS9D1-207ENST00000568691 CFAP161Q6P656 301 aa7.69□□□□□ -1.18
VPS9D1-207ENST00000568691 TOMM7Q9P0U1 55 aa7.69□□□□□ -1.18
VPS9D1-207ENST00000568691 COX11Q9Y6N1 276 aa7.69□□□□□ -1.18
VPS9D1-207ENST00000568691 LECT2O14960 151 aa7.68□□□□□ -1.18
VPS9D1-207ENST00000568691 FXYD2P54710 66 aa7.68□□□□□ -1.18
VPS9D1-207ENST00000568691 RPL24P83731 157 aaKnown RBP7.68□□□□□ -1.18
VPS9D1-207ENST00000568691 KIAA0087Q14695 138 aa7.68□□□□□ -1.18
VPS9D1-207ENST00000568691 C6orf226Q5I0X4 101 aa7.68□□□□□ -1.18
VPS9D1-207ENST00000568691 Q9HAA7 133 aa7.68□□□□□ -1.18
VPS9D1-207ENST00000568691 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.67□□□□□ -1.18
VPS9D1-207ENST00000568691 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
VPS9D1-207ENST00000568691 CKS1BP61024 79 aa7.67□□□□□ -1.18
VPS9D1-207ENST00000568691 RPL37AP61513 92 aaKnown RBP7.67□□□□□ -1.18
VPS9D1-207ENST00000568691 SPAG11BQ08648 103 aa7.67□□□□□ -1.18
VPS9D1-207ENST00000568691 COX17Q14061 63 aa7.67□□□□□ -1.18
VPS9D1-207ENST00000568691 MEIG1Q5JSS6 88 aa7.66□□□□□ -1.18
VPS9D1-207ENST00000568691 IGKV2D-24A0A075B6R9 120 aa7.65□□□□□ -1.18
VPS9D1-207ENST00000568691 GVQW2A0A096LPI5 108 aaPredicted RBP7.65□□□□□ -1.18
VPS9D1-207ENST00000568691 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.64□□□□□ -1.19
VPS9D1-207ENST00000568691 C2orf48Q96LS8 159 aa7.64□□□□□ -1.19
VPS9D1-207ENST00000568691 NHP2Q9NX24 153 aaKnown RBP7.64□□□□□ -1.19
VPS9D1-207ENST00000568691 ERG28Q9UKR5 140 aa7.64□□□□□ -1.19
VPS9D1-207ENST00000568691 A0A0B4J2C4 111 aa7.63□□□□□ -1.19
VPS9D1-207ENST00000568691 TRBV30A0A0K0K1B3 111 aa7.63□□□□□ -1.19
VPS9D1-207ENST00000568691 SMIM13P0DJ93 91 aa7.63□□□□□ -1.19
VPS9D1-207ENST00000568691 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
VPS9D1-207ENST00000568691 C15orf56Q8N910 161 aa7.63□□□□□ -1.19
VPS9D1-207ENST00000568691 ZNF561-AS1K7EIQ3 104 aa7.62□□□□□ -1.19
VPS9D1-207ENST00000568691 TAX1BP3O14907 124 aa7.62□□□□□ -1.19
VPS9D1-207ENST00000568691 LINC00308Q8TCZ7 52 aa7.62□□□□□ -1.19
VPS9D1-207ENST00000568691 Q6ZRU5 148 aa7.61□□□□□ -1.19
VPS9D1-207ENST00000568691 MUSTN1Q8IVN3 82 aa7.61□□□□□ -1.19
VPS9D1-207ENST00000568691 LOC107984156A0A0G2JMH3 177 aa7.6□□□□□ -1.19
VPS9D1-207ENST00000568691 A4D1N5 150 aa7.6□□□□□ -1.19
VPS9D1-207ENST00000568691 C2orf82Q6UX34 121 aa7.6□□□□□ -1.19
VPS9D1-207ENST00000568691 ARL17AQ8IVW1 177 aa7.6□□□□□ -1.19
VPS9D1-207ENST00000568691 C9orf118A6NHY6 69 aa7.59□□□□□ -1.19
VPS9D1-207ENST00000568691 LINC00158P58513 81 aa7.59□□□□□ -1.19
VPS9D1-207ENST00000568691 MIR7-3HGQ8N6C7 128 aa7.59□□□□□ -1.19
VPS9D1-207ENST00000568691 CFC1BP0CG36 223 aa7.58□□□□□ -1.2
VPS9D1-207ENST00000568691 CFC1P0CG37 223 aa7.58□□□□□ -1.2
VPS9D1-207ENST00000568691 RNF151Q2KHN1 245 aa7.58□□□□□ -1.2
VPS9D1-207ENST00000568691 CAMK2N2Q96S95 79 aa7.58□□□□□ -1.2
VPS9D1-207ENST00000568691 USP17L23D6RBM5 183 aa7.57□□□□□ -1.2
VPS9D1-207ENST00000568691 PANO1I0J062 215 aa7.57□□□□□ -1.2
VPS9D1-207ENST00000568691 K7ERJ3 54 aa7.57□□□□□ -1.2
VPS9D1-207ENST00000568691 C14orf177Q52M58 125 aa7.57□□□□□ -1.2
VPS9D1-207ENST00000568691 DAND5Q8N907 189 aa7.57□□□□□ -1.2
VPS9D1-207ENST00000568691 RAB37Q96AX2 223 aa7.57□□□□□ -1.2
VPS9D1-207ENST00000568691 PRO1854Q9UHT4 67 aa7.57□□□□□ -1.2
VPS9D1-207ENST00000568691 PFN2P35080 140 aa7.56□□□□□ -1.2
VPS9D1-207ENST00000568691 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
VPS9D1-207ENST00000568691 LYRM7Q5U5X0 104 aa7.56□□□□□ -1.2
VPS9D1-207ENST00000568691 UNQ6190/PRO20217Q6UXQ8 127 aa7.56□□□□□ -1.2
VPS9D1-207ENST00000568691 SOSTDC1Q6X4U4 206 aa7.56□□□□□ -1.2
VPS9D1-207ENST00000568691 A0A1B0GV90 55 aa7.55□□□□□ -1.2
VPS9D1-207ENST00000568691 NDUFC2O95298 119 aa7.55□□□□□ -1.2
VPS9D1-207ENST00000568691 SYCNQ0VAF6 134 aa7.55□□□□□ -1.2
VPS9D1-207ENST00000568691 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
VPS9D1-207ENST00000568691 C6orf48Q9UBA6 75 aa7.55□□□□□ -1.2
VPS9D1-207ENST00000568691 A0A0U1RRA0 63 aa7.54□□□□□ -1.2
VPS9D1-207ENST00000568691 NPC2P61916 151 aa7.54□□□□□ -1.2
VPS9D1-207ENST00000568691 C10orf25Q5T742 122 aa7.54□□□□□ -1.2
VPS9D1-207ENST00000568691 CARD19Q96LW7 228 aa7.54□□□□□ -1.2
VPS9D1-207ENST00000568691 SND1-IT1Q9HBX3 110 aa7.54□□□□□ -1.2
VPS9D1-207ENST00000568691 TRAV13-2A0A0B4J235 113 aa7.53□□□□□ -1.2
VPS9D1-207ENST00000568691 A0A1W2PPM0 123 aa7.53□□□□□ -1.2
VPS9D1-207ENST00000568691 NDUFC2-KCTD14E9PQ53 114 aa7.53□□□□□ -1.2
VPS9D1-207ENST00000568691 EIF4EBP3O60516 100 aaPredicted RBP7.53□□□□□ -1.2
VPS9D1-207ENST00000568691 TSPAN13O95857 204 aa7.53□□□□□ -1.2
VPS9D1-207ENST00000568691 TLX1NBP0CAT3 122 aa7.53□□□□□ -1.2
VPS9D1-207ENST00000568691 FABP2P12104 132 aa7.53□□□□□ -1.2
VPS9D1-207ENST00000568691 LINC01600Q96MT4 127 aa7.53□□□□□ -1.2
VPS9D1-207ENST00000568691 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.53□□□□□ -1.2
VPS9D1-207ENST00000568691 H3BUT2 72 aa7.52□□□□□ -1.21
VPS9D1-207ENST00000568691 CNBPP62633 177 aaKnown RBP7.52□□□□□ -1.21
VPS9D1-207ENST00000568691 LINC00526Q96FQ7 95 aa7.52□□□□□ -1.21
VPS9D1-207ENST00000568691 PKIGQ9Y2B9 76 aa7.52□□□□□ -1.21
VPS9D1-207ENST00000568691 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
VPS9D1-207ENST00000568691 C9orf116Q5BN46 136 aaPredicted RBP7.51□□□□□ -1.21
VPS9D1-207ENST00000568691 RPL13AP40429 203 aaKnown RBP7.5□□□□□ -1.21
VPS9D1-207ENST00000568691 GTF2H5Q6ZYL4 71 aa7.5□□□□□ -1.21
VPS9D1-207ENST00000568691 TRBV10-2A0A0K0K1G8 114 aa7.49□□□□□ -1.21
VPS9D1-207ENST00000568691 VAMP3Q15836 100 aa7.49□□□□□ -1.21
VPS9D1-207ENST00000568691 IGKV2-28A0A075B6P5 120 aa7.48□□□□□ -1.21
VPS9D1-207ENST00000568691 IGKV2D-28P01615 120 aa7.48□□□□□ -1.21
VPS9D1-207ENST00000568691 Q1RN00 199 aa7.48□□□□□ -1.21
VPS9D1-207ENST00000568691 TRBV20-1A0A075B6N2 111 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms