RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 F8WEM9 126 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 H3BQ85 93 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 LEPROTO15243 131 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 PIN1P1O15428 100 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 NDUFB1O75438 58 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 NPPCP23582 126 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 FAM74A4Q5TZK3 123 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 C16orf47Q6ZP98 133 aaPredicted RBP1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 Q8N6K4 173 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 CCL4L1Q8NHW4 92 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 UBL5Q9BZL1 73 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 C11orf1Q9H5F2 150 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 NDUFA12Q9UI09 145 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 UBE2D4Q9Y2X8 147 aa1.83□□□□□ -2.12
HERPUD1-212ENST00000567944 TRAV23DV6A0A075B6W5 121 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 A0A1B0GUT8 65 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 HIGD1CA8MV81 97 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 TMEM14DPA8MWL7 114 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 D6R8Y8 96 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 IGHV3-33P01772 117 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 MSMBP08118 114 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 SAA2P0DJI9 122 aaPredicted RBP1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 PDE6HQ13956 83 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 C9orf116Q5BN46 136 aaPredicted RBP1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 LYZL2Q7Z4W2 148 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 KRTAP13-1Q8IUC0 172 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 MUSTN1Q8IVN3 82 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 FAM223AQ8IWN6 122 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 SPTSSBQ8NFR3 76 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 FDCSPQ8NFU4 85 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 RNASE6Q93091 150 aaKnown RBP1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 RETNLBQ9BQ08 111 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 CDC42SE1Q9NRR8 79 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 MEGF8Q7Z7M0 2845 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 HEATR1Q9H583 2144 aaKnown RBP1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 ARFGEF3Q5TH69 2177 aa1.82□□□□□ -2.12
HERPUD1-212ENST00000567944 KIAA1549Q9HCM3 1950 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 SCN3AQ9NY46 2000 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 IGKV1-27A0A075B6S5 117 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 IGHV3OR16-8A0A075B7F1 116 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 IGHV7-4-1A0A0J9YVY3 117 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 LINC01546A6NGU7 62 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 FAM223BA6NKX1 122 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 CPSF4LA6NMK7 179 aaKnown RBP1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 A6NN06 94 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 HCG22E2RYF7 251 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 F8VRH5 84 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 JMJD7-PLA2G4BH0Y9G9 81 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 CHKB-CPT1BH3BT56 60 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 M0R3E3 92 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 SPINK4O60575 86 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 ZNF22P17026 224 aaPredicted RBP1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 PDE6GP18545 87 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 BSPH1Q075Z2 132 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 KISS1Q15726 138 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 PATE2Q6UY27 113 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 LINC00474Q9P2X8 69 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 TIMM8BQ9Y5J9 83 aaPredicted RBP1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 ICOSQ9Y6W8 199 aa1.81□□□□□ -2.12
HERPUD1-212ENST00000567944 TRRAPQ9Y4A5 3859 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 EXPH5Q8NEV8 1989 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 TRBV6-8A0A0A6YYG3 113 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 A0A0J9YX75 114 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 A6NED7 52 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 SDHAF1A6NFY7 115 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 C11orf86A6NJI1 115 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 GNRH2O43555 120 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 IGHV1-69P01742 117 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 IGHV3-11P01762 117 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 TRGV3P03979 118 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 ARL14EPLP0DKL9 152 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 COX6B1P14854 86 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 ELOF1P60002 83 aaKnown RBP1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 TFF3Q07654 80 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 MIAQ16674 131 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 SPANXN5Q5MJ07 72 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 C10orf128Q5T292 105 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 LYPD5Q6UWN5 251 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 RPS27LQ71UM5 84 aaKnown RBP1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 PFN4Q8NHR9 129 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 PATE1Q8WXA2 126 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 C14orf132Q9NPU4 83 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 U3KQK5 164 aa1.8□□□□□ -2.12
HERPUD1-212ENST00000567944 TRAV22A0A0B4J277 110 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 TRBV6-1A0A0K0K1D8 114 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 C16orf90A8MZG2 172 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 IGHV3-30P01768 117 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 IGKV1-16P04430 117 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 ARMS2P0C7Q2 107 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 IGHV3-30-5P0DP03 117 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 SPINT3P49223 89 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 FXYD3Q14802 87 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 C10orf113Q5VZT2 155 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 TMEM254Q8TBM7 123 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 TMEM263Q8WUH6 116 aaKnown RBP1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 COX14Q96I36 57 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 TMEM14BQ9NUH8 114 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 R4GMQ9 66 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 VWFP04275 2813 aa1.79□□□□□ -2.12
HERPUD1-212ENST00000567944 KMT2CQ8NEZ4 4911 aaKnown RBP1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms