RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 Q56UQ5 140 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 NMSQ5H8A3 153 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 UNQ5815/PRO19632Q6UWF5 114 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 C5orf56Q8N8D9 126 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 PPP1R1CQ8WVI7 109 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 VPS25Q9BRG1 176 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 PDCD10Q9BUL8 212 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 TIMM8BQ9Y5J9 83 aaPredicted RBP0.74□□□□□ -2.29
CHD9-215ENST00000565442 LINC00312Q9Y6C7 94 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 URB1O60287 2271 aaKnown RBP0.74□□□□□ -2.29
CHD9-215ENST00000565442 UNC79Q9P2D8 2635 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 USP9YO00507 2555 aaPredicted RBP0.74□□□□□ -2.29
CHD9-215ENST00000565442 TRRAPQ9Y4A5 3859 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 ACACBO00763 2458 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 NIPBLQ6KC79 2804 aaeCLIP0.74□□□□□ -2.29
CHD9-215ENST00000565442 MEGF8Q7Z7M0 2845 aa0.74□□□□□ -2.29
CHD9-215ENST00000565442 PKDREJQ9NTG1 2253 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 LYSTQ99698 3801 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 ABCA12Q86UK0 2595 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 DOPEY1Q5JWR5 2465 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 RIF1Q5UIP0 2472 aaKnown RBP0.73□□□□□ -2.29
CHD9-215ENST00000565442 DNAH1Q9P2D7 4330 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 TRBV20-1A0A075B6N2 111 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 A0A096LPF7 62 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 H3BQ15 152 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 I3L2K1 104 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 M0R2P5 195 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 SPINK4O60575 86 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 NDUFA3O95167 84 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 IFNA17P01571 189 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 IGHV3-33P01772 117 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 TRACP01848 142 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 APOC1P02654 83 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 RBP4P02753 201 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 SLC25A6P12236 298 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 SNRPD3P62318 126 aaKnown RBP0.73□□□□□ -2.29
CHD9-215ENST00000565442 HAMPP81172 84 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 HEPN1Q6WQI6 88 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 FAM213BQ8TBF2 198 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 CLEC2BQ92478 149 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 DPH3Q96FX2 82 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 LIMD2Q9BT23 127 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 PSENENQ9NZ42 101 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 KAAG1Q9UBP8 84 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 CSMD3Q7Z407 3707 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 CADP27708 2225 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 VWFP04275 2813 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 MXRA5Q9NR99 2828 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 PTPN13Q12923 2485 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 DNAH3Q8TD57 4116 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 HUWE1Q7Z6Z7 4374 aaKnown RBP0.73□□□□□ -2.29
CHD9-215ENST00000565442 DNAH7Q8WXX0 4024 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 HIVEP1P15822 2718 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 ITPR2Q14571 2701 aa0.73□□□□□ -2.29
CHD9-215ENST00000565442 SPTBN1Q01082 2364 aaKnown RBP0.72□□□□□ -2.29
CHD9-215ENST00000565442 ACACAQ13085 2346 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 PCNX1Q96RV3 2341 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 DNAH9Q9NYC9 4486 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 USF3Q68DE3 2245 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 J3QR89 54 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 M0R1W7 72 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 GNG7O60262 68 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 YPEL1O60688 119 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 NMBP08949 121 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 IGLC1P0CG04 106 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 HTN1P15515 57 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 UBE2L3P68036 154 aaKnown RBP0.72□□□□□ -2.29
CHD9-215ENST00000565442 PRCDQ00LT1 54 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 CATR1Q13166 79 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 PMCHL1Q16048 86 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 IQCJQ1A5X6 159 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 SPINK13Q1W4C9 94 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 DEFB135Q30KP9 77 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 PSMG4Q5JS54 123 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 CLPSL2Q6UWE3 100 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 ATP11AUNQ6ZP68 121 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 CYP2G1PQ6ZSU1 146 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 TMEM167AQ8TBQ9 72 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 S100ZQ8WXG8 99 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 LSM10Q969L4 123 aaKnown RBP0.72□□□□□ -2.29
CHD9-215ENST00000565442 AP1S3Q96PC3 154 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 CIB3Q96Q77 187 aaPredicted RBP0.72□□□□□ -2.29
CHD9-215ENST00000565442 TMEM191AQ9H0A3 160 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 NDUFA4L2Q9NRX3 87 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 RPRMQ9NS64 109 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 TMEM14BQ9NUH8 114 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 GNG13Q9P2W3 67 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 RABAC1Q9UI14 185 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 SCP2D1Q9UJQ7 156 aa0.72□□□□□ -2.29
CHD9-215ENST00000565442 NSD1Q96L73 2696 aaPredicted RBP0.72□□□□□ -2.29
CHD9-215ENST00000565442 MAP1AP78559 2803 aaPredicted RBP0.72□□□□□ -2.29
CHD9-215ENST00000565442 COL7A1Q02388 2944 aa0.71□□□□□ -2.29
CHD9-215ENST00000565442 PLCE1Q9P212 2302 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 WNK2Q9Y3S1 2297 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 TRAV12-3A0A0B4J271 114 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 A0A0J9YY99 117 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 KANTRA0A1W2PQU2 76 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 NUPR2A6NF83 97 aa0.71□□□□□ -2.3
CHD9-215ENST00000565442 NAP1L6A6NFF2 107 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms