RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CTAG1AP78358 180 aa6.08□□□□□ -1.44
SF3B3-204ENST00000563739 PAPPA-AS1Q5QFB9 102 aa6.08□□□□□ -1.44
SF3B3-204ENST00000563739 C10orf25Q5T742 122 aa6.08□□□□□ -1.44
SF3B3-204ENST00000563739 ZC2HC1BQ5TFG8 222 aa6.08□□□□□ -1.44
SF3B3-204ENST00000563739 C2orf48Q96LS8 159 aa6.08□□□□□ -1.44
SF3B3-204ENST00000563739 VCX2Q9H322 139 aa6.08□□□□□ -1.44
SF3B3-204ENST00000563739 M0R143 59 aa6.07□□□□□ -1.44
SF3B3-204ENST00000563739 TSPAN13O95857 204 aa6.07□□□□□ -1.44
SF3B3-204ENST00000563739 LBHQ53QV2 105 aaPredicted RBP6.07□□□□□ -1.44
SF3B3-204ENST00000563739 ANKRD39Q53RE8 183 aa6.07□□□□□ -1.44
SF3B3-204ENST00000563739 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
SF3B3-204ENST00000563739 CAMK2N2Q96S95 79 aa6.07□□□□□ -1.44
SF3B3-204ENST00000563739 A0A087WZ39 114 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 IGHV3OR16-9A0A0B4J2B5 98 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 F8VRH5 84 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 COX8AP10176 69 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 MALP21145 153 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 PLNP26678 52 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 RNF151Q2KHN1 245 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 SLC25A34Q6PIV7 304 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 FAM19A5Q7Z5A7 132 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-204ENST00000563739 C5orf38Q86SI9 138 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 SNHG12Q9BXW3 62 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
SF3B3-204ENST00000563739 MRPL35Q9NZE8 188 aaKnown RBP6.06□□□□□ -1.44
SF3B3-204ENST00000563739 CHTOPQ9Y3Y2 248 aaKnown RBP6.06□□□□□ -1.44
SF3B3-204ENST00000563739 RPL13AP40429 203 aaKnown RBP6.05□□□□□ -1.44
SF3B3-204ENST00000563739 PMVKQ15126 192 aa6.05□□□□□ -1.44
SF3B3-204ENST00000563739 FAM19A3Q7Z5A8 133 aa6.05□□□□□ -1.44
SF3B3-204ENST00000563739 C6orf48Q9UBA6 75 aa6.05□□□□□ -1.44
SF3B3-204ENST00000563739 DLEU1O43261 78 aa6.04□□□□□ -1.44
SF3B3-204ENST00000563739 TLX1NBP0CAT3 122 aa6.04□□□□□ -1.44
SF3B3-204ENST00000563739 SPAG11BQ08648 103 aa6.04□□□□□ -1.44
SF3B3-204ENST00000563739 BOD1L2Q8IYS8 172 aa6.04□□□□□ -1.44
SF3B3-204ENST00000563739 RETNLBQ9BQ08 111 aa6.04□□□□□ -1.44
SF3B3-204ENST00000563739 CST9LQ9H4G1 147 aa6.04□□□□□ -1.44
SF3B3-204ENST00000563739 HERVK_113P63121 156 aa6.03□□□□□ -1.44
SF3B3-204ENST00000563739 SEC11AP67812 179 aa6.03□□□□□ -1.44
SF3B3-204ENST00000563739 KRTAP13-2Q52LG2 175 aa6.03□□□□□ -1.44
SF3B3-204ENST00000563739 ORAOV1Q8WV07 137 aa6.03□□□□□ -1.44
SF3B3-204ENST00000563739 M0QXV9 152 aa6.02□□□□□ -1.45
SF3B3-204ENST00000563739 NMUP48645 174 aa6.02□□□□□ -1.45
SF3B3-204ENST00000563739 C9orf129Q5T035 196 aaKnown RBP6.02□□□□□ -1.45
SF3B3-204ENST00000563739 LINC01561Q8N1V8 128 aa6.02□□□□□ -1.45
SF3B3-204ENST00000563739 GEMIN7Q9H840 131 aaKnown RBP6.02□□□□□ -1.45
SF3B3-204ENST00000563739 TP73-AS1Q9UF72 201 aa6.02□□□□□ -1.45
SF3B3-204ENST00000563739 IGLV5-45A0A087WSX0 123 aa6.01□□□□□ -1.45
SF3B3-204ENST00000563739 IGKV2D-26A0A0A0MRZ7 120 aa6.01□□□□□ -1.45
SF3B3-204ENST00000563739 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
SF3B3-204ENST00000563739 KIAA0087Q14695 138 aa6.01□□□□□ -1.45
SF3B3-204ENST00000563739 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
SF3B3-204ENST00000563739 UNQ6190/PRO20217Q6UXQ8 127 aa6.01□□□□□ -1.45
SF3B3-204ENST00000563739 C2orf91Q6ZV80 131 aa6.01□□□□□ -1.45
SF3B3-204ENST00000563739 PCP2Q8IVA1 136 aa6.01□□□□□ -1.45
SF3B3-204ENST00000563739 LINC00469Q8N7U9 141 aa6.01□□□□□ -1.45
SF3B3-204ENST00000563739 CDKN2A-AS1Q9UH64 79 aa6.01□□□□□ -1.45
SF3B3-204ENST00000563739 C11orf86A6NJI1 115 aa6□□□□□ -1.45
SF3B3-204ENST00000563739 ZNF861PO60384 105 aa6□□□□□ -1.45
SF3B3-204ENST00000563739 E9PLD3 99 aa5.99□□□□□ -1.45
SF3B3-204ENST00000563739 HINT1P49773 126 aaPredicted RBP5.99□□□□□ -1.45
SF3B3-204ENST00000563739 BATFQ16520 125 aa5.99□□□□□ -1.45
SF3B3-204ENST00000563739 COL5A1-AS1Q5SY13 56 aa5.99□□□□□ -1.45
SF3B3-204ENST00000563739 HIGD1BQ9P298 99 aa5.99□□□□□ -1.45
SF3B3-204ENST00000563739 SMIM1B2RUZ4 78 aa5.98□□□□□ -1.45
SF3B3-204ENST00000563739 F8WDY8 70 aa5.98□□□□□ -1.45
SF3B3-204ENST00000563739 NDUFA1O15239 70 aa5.98□□□□□ -1.45
SF3B3-204ENST00000563739 GAGE2EQ4V326 116 aa5.98□□□□□ -1.45
SF3B3-204ENST00000563739 ANAPC11Q9NYG5 84 aa5.98□□□□□ -1.45
SF3B3-204ENST00000563739 GAGE2DQ9UEU5 116 aa5.98□□□□□ -1.45
SF3B3-204ENST00000563739 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
SF3B3-204ENST00000563739 A0A1B0GV90 55 aa5.97□□□□□ -1.45
SF3B3-204ENST00000563739 H3BRM9 83 aa5.97□□□□□ -1.45
SF3B3-204ENST00000563739 SPINK8P0C7L1 97 aa5.97□□□□□ -1.45
SF3B3-204ENST00000563739 ZNF22P17026 224 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-204ENST00000563739 HERVK_113P61574 105 aa5.97□□□□□ -1.45
SF3B3-204ENST00000563739 BVES-AS1Q5T3Y7 98 aa5.97□□□□□ -1.45
SF3B3-204ENST00000563739 Q8IZM0 81 aa5.97□□□□□ -1.45
SF3B3-204ENST00000563739 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
SF3B3-204ENST00000563739 TTTY13Q9BZ97 58 aa5.97□□□□□ -1.45
SF3B3-204ENST00000563739 TOMM7Q9P0U1 55 aa5.97□□□□□ -1.45
SF3B3-204ENST00000563739 MYMXA0A1B0GTQ4 84 aa5.96□□□□□ -1.46
SF3B3-204ENST00000563739 TMEM223A0PJW6 202 aa5.96□□□□□ -1.46
SF3B3-204ENST00000563739 PRSS2P07478 247 aa5.96□□□□□ -1.46
SF3B3-204ENST00000563739 UBE2BP63146 152 aa5.96□□□□□ -1.46
SF3B3-204ENST00000563739 HSD52Q0P140 79 aa5.96□□□□□ -1.46
SF3B3-204ENST00000563739 KRTAP19-2Q3LHN2 52 aa5.96□□□□□ -1.46
SF3B3-204ENST00000563739 TMEM170BQ5T4T1 132 aa5.96□□□□□ -1.46
SF3B3-204ENST00000563739 C2orf82Q6UX34 121 aa5.95□□□□□ -1.46
SF3B3-204ENST00000563739 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
SF3B3-204ENST00000563739 IGLV5-39A0A0G2JS06 123 aa5.94□□□□□ -1.46
SF3B3-204ENST00000563739 TRBV30A0A0K0K1B3 111 aa5.94□□□□□ -1.46
SF3B3-204ENST00000563739 LEPROTO15243 131 aa5.94□□□□□ -1.46
SF3B3-204ENST00000563739 CXCL5P42830 114 aa5.94□□□□□ -1.46
SF3B3-204ENST00000563739 CKS1BP61024 79 aa5.94□□□□□ -1.46
SF3B3-204ENST00000563739 TAL2Q16559 108 aa5.94□□□□□ -1.46
SF3B3-204ENST00000563739 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
SF3B3-204ENST00000563739 COX7B2Q8TF08 81 aa5.94□□□□□ -1.46
SF3B3-204ENST00000563739 C6orf226Q5I0X4 101 aa5.93□□□□□ -1.46
SF3B3-204ENST00000563739 PLEKHB2Q96CS7 222 aa5.93□□□□□ -1.46
SF3B3-204ENST00000563739 CDIP1Q9H305 208 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms