RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 SMR3BP02814 79 aaPredicted RBP-0.54□□□□□ -2.5
CHD9-207ENST00000562806 IGLC1P0CG04 106 aa-0.54□□□□□ -2.5
CHD9-207ENST00000562806 MRPL54Q6P161 138 aaKnown RBP-0.54□□□□□ -2.5
CHD9-207ENST00000562806 FXYD6Q9H0Q3 95 aa-0.54□□□□□ -2.5
CHD9-207ENST00000562806 VPS13CQ709C8 3753 aa-0.54□□□□□ -2.5
CHD9-207ENST00000562806 CEP350Q5VT06 3117 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 FMN2Q9NZ56 1722 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 DCHS1Q96JQ0 3298 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 K7EP13 123 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 SSSCA1O60232 199 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 MGPP08493 103 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 CCDC58Q4VC31 144 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 FAM223AQ8IWN6 122 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 DEFB105AQ8NG35 78 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 TMEM263Q8WUH6 116 aaKnown RBP-0.55□□□□□ -2.5
CHD9-207ENST00000562806 LCN9Q8WX39 176 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 LINC01600Q96MT4 127 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 FAM107BQ9H098 131 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 NXT2Q9NPJ8 142 aaKnown RBP-0.55□□□□□ -2.5
CHD9-207ENST00000562806 EP400Q96L91 3159 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 COL14A1Q05707 1796 aaKnown RBP-0.55□□□□□ -2.5
CHD9-207ENST00000562806 C1orf167Q5SNV9 1468 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 NUP188Q5SRE5 1749 aa-0.55□□□□□ -2.5
CHD9-207ENST00000562806 TOP2BQ02880 1626 aa-0.56□□□□□ -2.5
CHD9-207ENST00000562806 DIP2CQ9Y2E4 1556 aa-0.56□□□□□ -2.5
CHD9-207ENST00000562806 TRBV7-4A0A0J9YYF1 115 aa-0.56□□□□□ -2.5
CHD9-207ENST00000562806 APOC2P02655 101 aa-0.56□□□□□ -2.5
CHD9-207ENST00000562806 MT1FP04733 61 aa-0.56□□□□□ -2.5
CHD9-207ENST00000562806 FGF7P21781 194 aa-0.56□□□□□ -2.5
CHD9-207ENST00000562806 DEFB1P60022 68 aa-0.56□□□□□ -2.5
CHD9-207ENST00000562806 DEFB112Q30KQ8 113 aa-0.56□□□□□ -2.5
CHD9-207ENST00000562806 C8orf59Q8N0T1 100 aaPredicted RBP-0.56□□□□□ -2.5
CHD9-207ENST00000562806 XRN1Q8IZH2 1706 aaKnown RBP-0.56□□□□□ -2.5
CHD9-207ENST00000562806 ADGRL2O95490 1459 aa-0.56□□□□□ -2.5
CHD9-207ENST00000562806 TROQ12816 1431 aaPredicted RBP-0.56□□□□□ -2.5
CHD9-207ENST00000562806 DNAH14Q0VDD8 3507 aa-0.57□□□□□ -2.5
CHD9-207ENST00000562806 NALCNQ8IZF0 1738 aa-0.57□□□□□ -2.5
CHD9-207ENST00000562806 MARF1Q9Y4F3 1742 aaKnown RBP-0.57□□□□□ -2.5
CHD9-207ENST00000562806 DEFB135Q30KP9 77 aa-0.57□□□□□ -2.5
CHD9-207ENST00000562806 ARL2-SNX15V9GYD0 113 aa-0.57□□□□□ -2.5
CHD9-207ENST00000562806 NLRP1Q9C000 1473 aa-0.57□□□□□ -2.5
CHD9-207ENST00000562806 MUC3AQ02505 3323 aa-0.57□□□□□ -2.5
CHD9-207ENST00000562806 WDFY4Q6ZS81 3184 aa-0.57□□□□□ -2.5
CHD9-207ENST00000562806 ROCK2O75116 1388 aaKnown RBP-0.57□□□□□ -2.5
CHD9-207ENST00000562806 KTN1Q86UP2 1357 aaKnown RBP-0.57□□□□□ -2.5
CHD9-207ENST00000562806 TCHHQ07283 1943 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 PCNTO95613 3336 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 MYOM2P54296 1465 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 K7EP34 96 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 AKAIN1P0CW23 69 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 UBA52P62987 128 aaKnown RBP-0.58□□□□□ -2.5
CHD9-207ENST00000562806 C9orf153Q5TBE3 101 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 SFTA2Q6UW10 78 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 PP6455Q8WZ26 134 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 FAM167A-AS1Q96KT0 104 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 CC2D2AQ9P2K1 1620 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 NAIPQ13075 1403 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 SCAPERQ9BY12 1400 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 A0A0G2JMZ2 1700 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 SZT2Q5T011 3432 aa-0.58□□□□□ -2.5
CHD9-207ENST00000562806 COL4A6Q14031 1691 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 PLEKHH2Q8IVE3 1493 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 MRC2Q9UBG0 1479 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 PTPN23Q9H3S7 1636 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 PAPPA2Q9BXP8 1791 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 LOC400499M0QZD8 3231 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 UBE2L5PA0A1B0GUS4 154 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 C9orf92A6NGG3 77 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 IFNGP01579 166 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 UBE2D3P61077 147 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 UBE2D2P62837 147 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 UBE2L3P68036 154 aaKnown RBP-0.59□□□□□ -2.5
CHD9-207ENST00000562806 S100A12P80511 92 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 Q0VG73 95 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 FDCSPQ8NFU4 85 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 DPH3P1Q9H4G8 78 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 FAIMQ9NVQ4 179 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 UQCR10Q9UDW1 63 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 SETBP1Q9Y6X0 1596 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 CHD1O14646 1710 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 CEP250Q9BV73 2442 aa-0.59□□□□□ -2.5
CHD9-207ENST00000562806 ADAMTS12P58397 1594 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 CFAP47Q6ZTR5 3102 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 FAM223BA6NKX1 122 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 H3BNG1 76 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 GNG11P61952 73 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 WHAMMP3Q1A5X7 153 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 KRTAP8-1Q8IUC2 63 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 C9orf62Q8N4C0 152 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 TSC22D3Q99576 134 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 CRIPTQ9P021 101 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 APLNQ9ULZ1 77 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 VCANP13611 3396 aa-0.6□□□□□ -2.51
CHD9-207ENST00000562806 MKI67P46013 3256 aaKnown RBP-0.6□□□□□ -2.51
CHD9-207ENST00000562806 TOPAZ1Q8N9V7 1692 aa-0.61□□□□□ -2.51
CHD9-207ENST00000562806 SYS1-DBNDD2H3BUS1 97 aa-0.61□□□□□ -2.51
CHD9-207ENST00000562806 HMGN1P05114 100 aa-0.61□□□□□ -2.51
CHD9-207ENST00000562806 ASIPP42127 132 aa-0.61□□□□□ -2.51
CHD9-207ENST00000562806 MANBALQ9NQG1 85 aa-0.61□□□□□ -2.51
CHD9-207ENST00000562806 S4R3F8 94 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms