RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 LINC00337Q8N6G1 96 aa2.87□□□□□ -1.95
UBR1-203ENST00000562173 FAM213BQ8TBF2 198 aa2.87□□□□□ -1.95
UBR1-203ENST00000562173 ENKURQ8TC29 256 aa2.87□□□□□ -1.95
UBR1-203ENST00000562173 BTF3L4Q96K17 158 aa2.87□□□□□ -1.95
UBR1-203ENST00000562173 IGKV2-28A0A075B6P5 120 aa2.86□□□□□ -1.95
UBR1-203ENST00000562173 FXYD6-FXYD2A0A087WZ82 144 aa2.86□□□□□ -1.95
UBR1-203ENST00000562173 C7orf77A4D0Y5 90 aa2.86□□□□□ -1.95
UBR1-203ENST00000562173 IFNA1P01562 189 aa2.86□□□□□ -1.95
UBR1-203ENST00000562173 IGKV2D-28P01615 120 aa2.86□□□□□ -1.95
UBR1-203ENST00000562173 TRGC1P0CF51 173 aa2.86□□□□□ -1.95
UBR1-203ENST00000562173 ZNF25P17030 456 aaPredicted RBP2.86□□□□□ -1.95
UBR1-203ENST00000562173 SERF2P84101 59 aa2.86□□□□□ -1.95
UBR1-203ENST00000562173 AKR1C8PQ5T2L2 129 aa2.86□□□□□ -1.95
UBR1-203ENST00000562173 SFT2D1Q8WV19 159 aa2.86□□□□□ -1.95
UBR1-203ENST00000562173 MRAP2Q96G30 205 aa2.86□□□□□ -1.95
UBR1-203ENST00000562173 C9orf92A6NGG3 77 aa2.85□□□□□ -1.95
UBR1-203ENST00000562173 C1orf196B1AJZ1 125 aa2.85□□□□□ -1.95
UBR1-203ENST00000562173 IGKV2D-26A0A0A0MRZ7 120 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 TRBV6-5A0A0K0K1A5 114 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 NDUFC2-KCTD14E9PQ53 114 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 PSPHP1O15172 72 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 PSMB2P49721 201 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 FAM231DQ6ZW35 169 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 C9orf62Q8N4C0 152 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 KCNRGQ8N5I3 272 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 IMMP2LQ96T52 175 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 MED28Q9H204 178 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 ST20Q9HBF5 79 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 TOMM7Q9P0U1 55 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 GNG13Q9P2W3 67 aa2.84□□□□□ -1.95
UBR1-203ENST00000562173 A0A096LNJ9 63 aa2.83□□□□□ -1.96
UBR1-203ENST00000562173 ZNF727A8MUV8 499 aa2.83□□□□□ -1.96
UBR1-203ENST00000562173 NUPR1O60356 82 aa2.83□□□□□ -1.96
UBR1-203ENST00000562173 RPL28P46779 137 aaKnown RBP2.83□□□□□ -1.96
UBR1-203ENST00000562173 UBE2AP49459 152 aa2.83□□□□□ -1.96
UBR1-203ENST00000562173 OR10D4PQ8NGN7 298 aa2.83□□□□□ -1.96
UBR1-203ENST00000562173 MBD3L1Q8WWY6 194 aa2.83□□□□□ -1.96
UBR1-203ENST00000562173 CCDC32Q9BV29 185 aa2.83□□□□□ -1.96
UBR1-203ENST00000562173 CNFNQ9BYD5 112 aa2.83□□□□□ -1.96
UBR1-203ENST00000562173 MED9Q9NWA0 146 aa2.83□□□□□ -1.96
UBR1-203ENST00000562173 TRBV27A0A0K0K1C4 114 aa2.82□□□□□ -1.96
UBR1-203ENST00000562173 ARPC5O15511 151 aa2.82□□□□□ -1.96
UBR1-203ENST00000562173 MT1FP04733 61 aa2.82□□□□□ -1.96
UBR1-203ENST00000562173 NMUP48645 174 aa2.82□□□□□ -1.96
UBR1-203ENST00000562173 ORMDL2Q53FV1 153 aa2.82□□□□□ -1.96
UBR1-203ENST00000562173 PLEKHB2Q96CS7 222 aa2.82□□□□□ -1.96
UBR1-203ENST00000562173 SMIM12Q96EX1 92 aa2.82□□□□□ -1.96
UBR1-203ENST00000562173 PKIGQ9Y2B9 76 aa2.82□□□□□ -1.96
UBR1-203ENST00000562173 TINCRA0A1B0GVN0 87 aa2.81□□□□□ -1.96
UBR1-203ENST00000562173 NDUFS5O43920 106 aa2.81□□□□□ -1.96
UBR1-203ENST00000562173 PFDN1O60925 122 aa2.81□□□□□ -1.96
UBR1-203ENST00000562173 MT2AP02795 61 aa2.81□□□□□ -1.96
UBR1-203ENST00000562173 FCER1GP30273 86 aa2.81□□□□□ -1.96
UBR1-203ENST00000562173 GNG4P50150 75 aa2.81□□□□□ -1.96
UBR1-203ENST00000562173 RPS20P60866 119 aaKnown RBP2.81□□□□□ -1.96
UBR1-203ENST00000562173 RAB5BP61020 215 aa2.81□□□□□ -1.96
UBR1-203ENST00000562173 FAM229BQ4G0N7 80 aa2.81□□□□□ -1.96
UBR1-203ENST00000562173 MRPL51Q4U2R6 128 aaKnown RBP2.81□□□□□ -1.96
UBR1-203ENST00000562173 PACRGQ96M98 296 aaPredicted RBP2.81□□□□□ -1.96
UBR1-203ENST00000562173 NKX6-2Q9C056 277 aaPredicted RBP2.81□□□□□ -1.96
UBR1-203ENST00000562173 PRO0628Q9UI54 55 aa2.81□□□□□ -1.96
UBR1-203ENST00000562173 SMIM26A0A096LP01 95 aa2.8□□□□□ -1.96
UBR1-203ENST00000562173 BORCS7-ASMTA0A0B4J1R7 106 aa2.8□□□□□ -1.96
UBR1-203ENST00000562173 F2Z2F3 143 aa2.8□□□□□ -1.96
UBR1-203ENST00000562173 M0R378 163 aa2.8□□□□□ -1.96
UBR1-203ENST00000562173 NPYP01303 97 aa2.8□□□□□ -1.96
UBR1-203ENST00000562173 SPRR4Q96PI1 79 aa2.8□□□□□ -1.96
UBR1-203ENST00000562173 HIGD2AQ9BW72 106 aa2.8□□□□□ -1.96
UBR1-203ENST00000562173 TRBV30A0A0K0K1B3 111 aa2.79□□□□□ -1.96
UBR1-203ENST00000562173 ERC2-IT1O76042 136 aa2.79□□□□□ -1.96
UBR1-203ENST00000562173 CXCL5P42830 114 aa2.79□□□□□ -1.96
UBR1-203ENST00000562173 TMEM241Q24JQ0 296 aa2.79□□□□□ -1.96
UBR1-203ENST00000562173 C6orf99Q4VX62 202 aa2.79□□□□□ -1.96
UBR1-203ENST00000562173 FP248Q71RG6 208 aaPredicted RBP2.79□□□□□ -1.96
UBR1-203ENST00000562173 TMEM126AQ9H061 195 aa2.79□□□□□ -1.96
UBR1-203ENST00000562173 NEBP20929 6669 aa2.79□□□□□ -1.96
UBR1-203ENST00000562173 RPL23P62829 140 aaKnown RBP2.78□□□□□ -1.96
UBR1-203ENST00000562173 MOBPQ13875 183 aa2.78□□□□□ -1.96
UBR1-203ENST00000562173 PCP2Q8IVA1 136 aa2.78□□□□□ -1.96
UBR1-203ENST00000562173 TGIF2-C20orf24A0A0A6YYL0 155 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 IGHV6-1A0A0B4J1U7 121 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 A0A1B0GXF2 115 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 HIGD1CA8MV81 97 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 HBBP68871 147 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 PMVKQ15126 192 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 C4orf26Q17RF5 130 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 Q6Q795 121 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 COX6B2Q6YFQ2 88 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 TIMM17AQ99595 171 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 TCEAL7Q9BRU2 100 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 TMEM191AQ9H0A3 160 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 MAP1LC3AQ9H492 121 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 CDKN2A-AS1Q9UH64 79 aa2.77□□□□□ -1.97
UBR1-203ENST00000562173 A0A0G2JQZ4 141 aa2.76□□□□□ -1.97
UBR1-203ENST00000562173 HRCT1Q6UXD1 115 aa2.76□□□□□ -1.97
UBR1-203ENST00000562173 TIMM21Q9BVV7 248 aa2.76□□□□□ -1.97
UBR1-203ENST00000562173 SMIM2Q9BVW6 85 aa2.76□□□□□ -1.97
UBR1-203ENST00000562173 TP73-AS1Q9UF72 201 aa2.76□□□□□ -1.97
UBR1-203ENST00000562173 LOC389332A0A1B0GUA5 103 aa2.75□□□□□ -1.97
UBR1-203ENST00000562173 D6R8Y8 96 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms