RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 CGREF1Q99674 301 aa1.63□□□□□ -2.15
SMG1-204ENST00000561940 ABRACLQ9P1F3 81 aa1.63□□□□□ -2.15
SMG1-204ENST00000561940 TMEM14DPA8MWL7 114 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 H3BMG7 143 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 PITX3O75364 302 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 KRTAP2-3P0C7H8 128 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 MT1HP80294 61 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 WFDC2Q14508 124 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 PIGYQ3MUY2 71 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 LINC01556Q5JQF7 62 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 TMEM244Q5VVB8 128 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 FOXI2Q6ZQN5 318 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 VSTM2AQ8TAG5 236 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 DPH3Q96FX2 82 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 KRTAP2-4Q9BYR9 128 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 CMC2Q9NRP2 79 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 SPANXCQ9NY87 97 aa1.62□□□□□ -2.15
SMG1-204ENST00000561940 JMJD7-PLA2G4BH0Y9G9 81 aa1.61□□□□□ -2.15
SMG1-204ENST00000561940 NCR3O14931 201 aa1.61□□□□□ -2.15
SMG1-204ENST00000561940 SAA1P0DJI8 122 aaPredicted RBP1.61□□□□□ -2.15
SMG1-204ENST00000561940 RPL7P18124 248 aaKnown RBP1.61□□□□□ -2.15
SMG1-204ENST00000561940 AKAP14Q86UN6 197 aa1.61□□□□□ -2.15
SMG1-204ENST00000561940 ATP6V0E2Q8NHE4 81 aa1.61□□□□□ -2.15
SMG1-204ENST00000561940 ZC2HC1AQ96GY0 325 aa1.61□□□□□ -2.15
SMG1-204ENST00000561940 NOP10Q9NPE3 64 aaKnown RBP1.61□□□□□ -2.15
SMG1-204ENST00000561940 DNAH8Q96JB1 4490 aa1.61□□□□□ -2.15
SMG1-204ENST00000561940 A8MTW9 85 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 NBEAP1P0C6P0 100 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 RPS28P62857 69 aaKnown RBP1.6□□□□□ -2.15
SMG1-204ENST00000561940 MIR22HGQ0VDD5 57 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 HMGN3Q15651 99 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 ASB16-AS1Q495Z4 193 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 Q56UQ5 140 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 IDO2Q6ZQW0 420 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 WFDC10BQ8IUB3 73 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 OR8J3Q8NGG0 315 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 SLC35B3Q9H1N7 401 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 PLAC8Q9NZF1 115 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 CCDC167Q9P0B6 97 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 PRO0255Q9UI72 69 aa1.6□□□□□ -2.15
SMG1-204ENST00000561940 NEBP20929 6669 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.59□□□□□ -2.15
SMG1-204ENST00000561940 LOC107986453A0A1B0GWG9 222 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 K7EIM0 57 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 PPYP01298 95 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 IGHV3-33P01772 117 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 HMGN1P05114 100 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 CASC2Q6XLA1 102 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 LINC00299Q6ZSB3 139 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 TMEM229BQ8NBD8 167 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 TMEM263Q8WUH6 116 aaKnown RBP1.59□□□□□ -2.15
SMG1-204ENST00000561940 PYDC1Q8WXC3 89 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 S100A13Q99584 98 aa1.59□□□□□ -2.15
SMG1-204ENST00000561940 SYNE2Q8WXH0 6885 aaKnown RBP1.58□□□□□ -2.16
SMG1-204ENST00000561940 IGLC7A0M8Q6 106 aa1.58□□□□□ -2.16
SMG1-204ENST00000561940 J3KT08 172 aa1.58□□□□□ -2.16
SMG1-204ENST00000561940 M0R2T5 61 aa1.58□□□□□ -2.16
SMG1-204ENST00000561940 GNG7O60262 68 aa1.58□□□□□ -2.16
SMG1-204ENST00000561940 SPATA45Q537H7 98 aa1.58□□□□□ -2.16
SMG1-204ENST00000561940 GLIPR1L1Q6UWM5 242 aa1.58□□□□□ -2.16
SMG1-204ENST00000561940 LINC00269Q8N2A0 174 aa1.58□□□□□ -2.16
SMG1-204ENST00000561940 CLEC2BQ92478 149 aa1.58□□□□□ -2.16
SMG1-204ENST00000561940 USH2AO75445 5202 aa1.57□□□□□ -2.16
SMG1-204ENST00000561940 LOC107984640A0A0U1RRK4 108 aa1.57□□□□□ -2.16
SMG1-204ENST00000561940 ZNF670-ZNF695F2Z2N8 137 aa1.57□□□□□ -2.16
SMG1-204ENST00000561940 TRAPPC2P0DI81 140 aa1.57□□□□□ -2.16
SMG1-204ENST00000561940 TRAPPC2BP0DI82 140 aa1.57□□□□□ -2.16
SMG1-204ENST00000561940 PRCDQ00LT1 54 aa1.57□□□□□ -2.16
SMG1-204ENST00000561940 OR10AC1Q8NH08 325 aa1.57□□□□□ -2.16
SMG1-204ENST00000561940 TMEM203Q969S6 136 aa1.57□□□□□ -2.16
SMG1-204ENST00000561940 RPRMQ9NS64 109 aa1.57□□□□□ -2.16
SMG1-204ENST00000561940 BET1LQ9NYM9 111 aa1.57□□□□□ -2.16
SMG1-204ENST00000561940 C3orf85A0A1B0GTC6 90 aa1.56□□□□□ -2.16
SMG1-204ENST00000561940 I3L2K1 104 aa1.56□□□□□ -2.16
SMG1-204ENST00000561940 HTN1P15515 57 aa1.56□□□□□ -2.16
SMG1-204ENST00000561940 KRTAP19-2Q3LHN2 52 aa1.56□□□□□ -2.16
SMG1-204ENST00000561940 KRTAP19-6Q3LI70 58 aa1.56□□□□□ -2.16
SMG1-204ENST00000561940 ANP32BQ92688 251 aaKnown RBP1.56□□□□□ -2.16
SMG1-204ENST00000561940 AP1S3Q96PC3 154 aa1.56□□□□□ -2.16
SMG1-204ENST00000561940 CIB3Q96Q77 187 aaPredicted RBP1.56□□□□□ -2.16
SMG1-204ENST00000561940 KMT2DO14686 5537 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 TRAV23DV6A0A075B6W5 121 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 TRAV30A0A087WSZ9 112 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 GNG11P61952 73 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 WT1-ASQ06250 92 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 SPINK13Q1W4C9 94 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 OR8I2Q8N0Y5 310 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 LSM10Q969L4 123 aaKnown RBP1.55□□□□□ -2.16
SMG1-204ENST00000561940 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 NIT2Q9NQR4 276 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 NDUFA4L2Q9NRX3 87 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 FKBP11Q9NYL4 201 aa1.55□□□□□ -2.16
SMG1-204ENST00000561940 MACF1Q9UPN3 7388 aaKnown RBP1.55□□□□□ -2.16
SMG1-204ENST00000561940 M0R2Z0 102 aa1.54□□□□□ -2.16
SMG1-204ENST00000561940 IGHV3-30P01768 117 aa1.54□□□□□ -2.16
SMG1-204ENST00000561940 IGHV3-30-5P0DP03 117 aa1.54□□□□□ -2.16
SMG1-204ENST00000561940 FOXA3P55318 350 aaPredicted RBP1.54□□□□□ -2.16
SMG1-204ENST00000561940 Q0VG73 95 aa1.54□□□□□ -2.16
SMG1-204ENST00000561940 OR51A4Q8NGJ6 313 aa1.54□□□□□ -2.16
SMG1-204ENST00000561940 BRK1Q8WUW1 75 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms