RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 IGKV2-28A0A075B6P5 120 aa6.09□□□□□ -1.43
CLK3-205ENST00000561673 A0A087X002 238 aa6.09□□□□□ -1.43
CLK3-205ENST00000561673 IGKV2D-28P01615 120 aa6.09□□□□□ -1.43
CLK3-205ENST00000561673 COX17Q14061 63 aa6.09□□□□□ -1.43
CLK3-205ENST00000561673 TMEM170BQ5T4T1 132 aa6.09□□□□□ -1.43
CLK3-205ENST00000561673 KRTAP13-1Q8IUC0 172 aa6.09□□□□□ -1.43
CLK3-205ENST00000561673 ZNF625Q96I27 306 aaPredicted RBP6.09□□□□□ -1.43
CLK3-205ENST00000561673 VPREB1P12018 145 aa6.08□□□□□ -1.44
CLK3-205ENST00000561673 ANAPC11Q9NYG5 84 aa6.08□□□□□ -1.44
CLK3-205ENST00000561673 CHTOPQ9Y3Y2 248 aaKnown RBP6.08□□□□□ -1.44
CLK3-205ENST00000561673 MUC2Q02817 5179 aa6.07□□□□□ -1.44
CLK3-205ENST00000561673 ATP6V1G1O75348 118 aa6.07□□□□□ -1.44
CLK3-205ENST00000561673 CRYGAP11844 174 aa6.07□□□□□ -1.44
CLK3-205ENST00000561673 UBE2AP49459 152 aa6.07□□□□□ -1.44
CLK3-205ENST00000561673 Q8NDZ9 215 aa6.07□□□□□ -1.44
CLK3-205ENST00000561673 CHCHD1Q96BP2 118 aaKnown RBP6.07□□□□□ -1.44
CLK3-205ENST00000561673 TRAV12-1A0A0B4J245 112 aa6.06□□□□□ -1.44
CLK3-205ENST00000561673 TSPAN13O95857 204 aa6.06□□□□□ -1.44
CLK3-205ENST00000561673 RPL24P83731 157 aaKnown RBP6.06□□□□□ -1.44
CLK3-205ENST00000561673 PRR4Q16378 134 aa6.06□□□□□ -1.44
CLK3-205ENST00000561673 SFTA2Q6UW10 78 aa6.06□□□□□ -1.44
CLK3-205ENST00000561673 IFI27L1Q96BM0 104 aa6.06□□□□□ -1.44
CLK3-205ENST00000561673 TMEM223A0PJW6 202 aa6.05□□□□□ -1.44
CLK3-205ENST00000561673 C9orf118A6NHY6 69 aa6.05□□□□□ -1.44
CLK3-205ENST00000561673 TMEM238C9JI98 176 aa6.05□□□□□ -1.44
CLK3-205ENST00000561673 TYMSOSQ8TAI1 123 aa6.05□□□□□ -1.44
CLK3-205ENST00000561673 TMEM126AQ9H061 195 aa6.05□□□□□ -1.44
CLK3-205ENST00000561673 B5MCH6 92 aa6.04□□□□□ -1.44
CLK3-205ENST00000561673 M0R378 163 aa6.04□□□□□ -1.44
CLK3-205ENST00000561673 LINC00158P58513 81 aa6.04□□□□□ -1.44
CLK3-205ENST00000561673 KRTAP13-2Q52LG2 175 aa6.04□□□□□ -1.44
CLK3-205ENST00000561673 SLC7A5P1Q8MH63 180 aa6.04□□□□□ -1.44
CLK3-205ENST00000561673 A0A0U1RRA0 63 aa6.03□□□□□ -1.44
CLK3-205ENST00000561673 S100A1P23297 94 aa6.03□□□□□ -1.44
CLK3-205ENST00000561673 PRLHP81277 87 aa6.03□□□□□ -1.44
CLK3-205ENST00000561673 XP32Q5T750 250 aa6.03□□□□□ -1.44
CLK3-205ENST00000561673 FAM19A1Q7Z5A9 133 aa6.03□□□□□ -1.44
CLK3-205ENST00000561673 CBLN2Q8IUK8 224 aa6.03□□□□□ -1.44
CLK3-205ENST00000561673 FAM19A2Q8N3H0 131 aa6.03□□□□□ -1.44
CLK3-205ENST00000561673 FAM229BQ4G0N7 80 aa6.02□□□□□ -1.45
CLK3-205ENST00000561673 HSBP1O75506 76 aa6.01□□□□□ -1.45
CLK3-205ENST00000561673 TRGC2P03986 189 aa6.01□□□□□ -1.45
CLK3-205ENST00000561673 SMIM13P0DJ93 91 aa6.01□□□□□ -1.45
CLK3-205ENST00000561673 PLEKHB2Q96CS7 222 aa6.01□□□□□ -1.45
CLK3-205ENST00000561673 IGKV2D-26A0A0A0MRZ7 120 aa5.99□□□□□ -1.45
CLK3-205ENST00000561673 H0Y8G0 127 aa5.99□□□□□ -1.45
CLK3-205ENST00000561673 LINC00310P59036 64 aa5.99□□□□□ -1.45
CLK3-205ENST00000561673 HERV-K104P63124 156 aa5.99□□□□□ -1.45
CLK3-205ENST00000561673 BOD1L2Q8IYS8 172 aa5.99□□□□□ -1.45
CLK3-205ENST00000561673 NDUFA12Q9UI09 145 aa5.99□□□□□ -1.45
CLK3-205ENST00000561673 SERF1AO75920 110 aa5.98□□□□□ -1.45
CLK3-205ENST00000561673 LEPROTL1O95214 131 aa5.98□□□□□ -1.45
CLK3-205ENST00000561673 MEIG1Q5JSS6 88 aa5.98□□□□□ -1.45
CLK3-205ENST00000561673 MIR7-3HGQ8N6C7 128 aa5.98□□□□□ -1.45
CLK3-205ENST00000561673 LINC00304Q8N9R0 145 aa5.98□□□□□ -1.45
CLK3-205ENST00000561673 HIGD2AQ9BW72 106 aa5.98□□□□□ -1.45
CLK3-205ENST00000561673 MYMXA0A1B0GTQ4 84 aa5.97□□□□□ -1.45
CLK3-205ENST00000561673 LINC00587B1AMM8 73 aa5.96□□□□□ -1.46
CLK3-205ENST00000561673 NCR3O14931 201 aa5.96□□□□□ -1.46
CLK3-205ENST00000561673 TSPEAR-AS2P59090 65 aa5.96□□□□□ -1.46
CLK3-205ENST00000561673 C3orf22Q8N5N4 141 aa5.96□□□□□ -1.46
CLK3-205ENST00000561673 KCNQ1DNQ9H478 68 aa5.96□□□□□ -1.46
CLK3-205ENST00000561673 COLCA2A8K830 154 aa5.95□□□□□ -1.46
CLK3-205ENST00000561673 PRYO14603 147 aa5.95□□□□□ -1.46
CLK3-205ENST00000561673 LEPROTO15243 131 aa5.95□□□□□ -1.46
CLK3-205ENST00000561673 FABP4P15090 132 aa5.95□□□□□ -1.46
CLK3-205ENST00000561673 PLNP26678 52 aa5.95□□□□□ -1.46
CLK3-205ENST00000561673 SPRR4Q96PI1 79 aa5.95□□□□□ -1.46
CLK3-205ENST00000561673 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
CLK3-205ENST00000561673 HSPB8Q9UJY1 196 aa5.95□□□□□ -1.46
CLK3-205ENST00000561673 MUC17Q685J3 4493 aa5.94□□□□□ -1.46
CLK3-205ENST00000561673 SPRR1AP35321 89 aa5.94□□□□□ -1.46
CLK3-205ENST00000561673 LINC00337Q8N6G1 96 aa5.94□□□□□ -1.46
CLK3-205ENST00000561673 DAND5Q8N907 189 aa5.94□□□□□ -1.46
CLK3-205ENST00000561673 PMCHL2Q9BQD1 86 aa5.94□□□□□ -1.46
CLK3-205ENST00000561673 MAP1LC3CQ9BXW4 147 aa5.94□□□□□ -1.46
CLK3-205ENST00000561673 LOC107984156A0A0G2JMH3 177 aa5.93□□□□□ -1.46
CLK3-205ENST00000561673 TRBV10-3A0A0K0K1G6 114 aa5.93□□□□□ -1.46
CLK3-205ENST00000561673 KRTAP4-16G5E9R7 235 aaPredicted RBP5.93□□□□□ -1.46
CLK3-205ENST00000561673 J3QQQ9 107 aa5.93□□□□□ -1.46
CLK3-205ENST00000561673 DPM2O94777 84 aa5.93□□□□□ -1.46
CLK3-205ENST00000561673 ARL17AQ8IVW1 177 aa5.93□□□□□ -1.46
CLK3-205ENST00000561673 IGKCP01834 107 aa5.92□□□□□ -1.46
CLK3-205ENST00000561673 CTAG1AP78358 180 aa5.92□□□□□ -1.46
CLK3-205ENST00000561673 SMCR5Q8TEV8 140 aa5.92□□□□□ -1.46
CLK3-205ENST00000561673 ZNF706Q9Y5V0 76 aaPredicted RBP5.92□□□□□ -1.46
CLK3-205ENST00000561673 ETDCA0A1B0GVM5 59 aa5.91□□□□□ -1.46
CLK3-205ENST00000561673 NMUP48645 174 aa5.91□□□□□ -1.46
CLK3-205ENST00000561673 HERVK_113P61574 105 aa5.91□□□□□ -1.46
CLK3-205ENST00000561673 LGALS3P17931 250 aaKnown RBP5.9□□□□□ -1.46
CLK3-205ENST00000561673 DDTP30046 118 aa5.9□□□□□ -1.46
CLK3-205ENST00000561673 SPAG11AQ6PDA7 123 aa5.9□□□□□ -1.46
CLK3-205ENST00000561673 PPDPFQ9H3Y8 114 aa5.9□□□□□ -1.46
CLK3-205ENST00000561673 IGLV7-46A0A075B6I9 117 aa5.89□□□□□ -1.47
CLK3-205ENST00000561673 TRBV10-2A0A0K0K1G8 114 aa5.89□□□□□ -1.47
CLK3-205ENST00000561673 S100A12P80511 92 aa5.89□□□□□ -1.47
CLK3-205ENST00000561673 ERC2-IT1O76042 136 aa5.88□□□□□ -1.47
CLK3-205ENST00000561673 TPRXLQ17RH7 258 aa5.88□□□□□ -1.47
CLK3-205ENST00000561673 LINC00483Q53H64 154 aa5.88□□□□□ -1.47
CLK3-205ENST00000561673 ADAMTSL4-AS1Q5T5F5 129 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms