RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 FOCADQ5VW36 1801 aa-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 LAMA2P24043 3122 aaKnown RBP-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 ABCC2Q92887 1545 aa-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 NEBP20929 6669 aa-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 H0Y9P7 68 aa-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 NDUFA2O43678 99 aa-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 SVBPQ8N300 66 aa-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 CDKN2A-AS1Q9UH64 79 aa-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 IER3IP1Q9Y5U9 82 aa-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 TARBP1Q13395 1621 aaKnown RBP-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 CICQ96RK0 1608 aaPredicted RBP-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 KALRNO60229 2985 aa-0.57□□□□□ -2.5
HMBOX1-216ENST00000561377 WDR87Q6ZQQ6 2873 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 NALCNQ8IZF0 1738 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 SHPRHQ149N8 1683 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 TOPAZ1Q8N9V7 1692 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 A0A087WVE0 104 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 SPTY2D1-AS1A0A0U1RR47 76 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 TMEM262E9PQX1 116 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 GNG4P50150 75 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 HEPN1Q6WQI6 88 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 HIGD1BQ9P298 99 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 ABCC5O15440 1437 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 DMXL1Q9Y485 3027 aa-0.58□□□□□ -2.5
HMBOX1-216ENST00000561377 CUX1P39880 1505 aa-0.59□□□□□ -2.5
HMBOX1-216ENST00000561377 CUBNO60494 3623 aa-0.59□□□□□ -2.5
HMBOX1-216ENST00000561377 TEX15Q9BXT5 2789 aa-0.59□□□□□ -2.5
HMBOX1-216ENST00000561377 NDUFC1O43677 76 aa-0.59□□□□□ -2.5
HMBOX1-216ENST00000561377 HMGN1P05114 100 aa-0.59□□□□□ -2.5
HMBOX1-216ENST00000561377 GNGT1P63211 74 aa-0.59□□□□□ -2.5
HMBOX1-216ENST00000561377 PSENENQ9NZ42 101 aa-0.59□□□□□ -2.5
HMBOX1-216ENST00000561377 TROQ12816 1431 aaPredicted RBP-0.59□□□□□ -2.5
HMBOX1-216ENST00000561377 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.59□□□□□ -2.5
HMBOX1-216ENST00000561377 UTP20O75691 2785 aaKnown RBP-0.59□□□□□ -2.5
HMBOX1-216ENST00000561377 MGAM2Q2M2H8 2515 aa-0.6□□□□□ -2.5
HMBOX1-216ENST00000561377 CHD1O14646 1710 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 SPHKAPQ2M3C7 1700 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 SAMD9Q5K651 1589 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 TRBV7-7A0A0K0K1E9 115 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 C7orf77A4D0Y5 90 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 C9orf92A6NGG3 77 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 SNAPC5O75971 98 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 MPC2O95563 127 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 ARMS2P0C7Q2 107 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 PMCHL1Q16048 86 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 PSMG4Q5JS54 123 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 SFTA2Q6UW10 78 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 COX6B2Q6YFQ2 88 aa-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 ROCK2O75116 1388 aaKnown RBP-0.6□□□□□ -2.51
HMBOX1-216ENST00000561377 NBEAQ8NFP9 2946 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 ANKRD50Q9ULJ7 1429 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 PREX1Q8TCU6 1659 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 HYDINQ4G0P3 5121 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 TRBV25-1A0A075B6N4 114 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 PPP3R1P63098 170 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 NMSQ5H8A3 153 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 WFDC13Q8IUB5 93 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 AP4S1Q9Y587 144 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 GCN1Q92616 2671 aaKnown RBP-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 COL14A1Q05707 1796 aaKnown RBP-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 BCORQ6W2J9 1755 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 PDCD11Q14690 1871 aaKnown RBP-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 LYSTQ99698 3801 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 RAPGEF2Q9Y4G8 1499 aa-0.61□□□□□ -2.51
HMBOX1-216ENST00000561377 C5P01031 1676 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 ANK3Q12955 4377 aaKnown RBP-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 FAM135AQ9P2D6 1515 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 CC2D2AQ9P2K1 1620 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 EFCAB10A6NFE3 127 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 H3BNG1 76 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 UQCRHP07919 91 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 RPL13AP3Q6NVV1 102 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 DEFB107AQ8IZN7 70 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 FAM107BQ9H098 131 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 KNDC1Q76NI1 1749 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 MTORP42345 2549 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 PZPP20742 1482 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 MLH3Q9UHC1 1453 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 VPS13BQ7Z7G8 4022 aa-0.62□□□□□ -2.51
HMBOX1-216ENST00000561377 MON2Q7Z3U7 1717 aa-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 CORTO00230 105 aa-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 RPL38P63173 70 aaKnown RBP-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 MRPS10P82664 201 aaKnown RBP-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 HMGN3Q15651 99 aa-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 ALKAL2Q6UX46 152 aa-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 CACFD1Q9UGQ2 172 aa-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 PDE4DIPQ5VU43 2346 aa-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 DNAH2Q9P225 4427 aa-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 LRRK2Q5S007 2527 aa-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 DNAH11Q96DT5 4516 aa-0.63□□□□□ -2.51
HMBOX1-216ENST00000561377 PRDM15P57071 1507 aaPredicted RBP-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 FRYQ5TBA9 3013 aa-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 USP9XQ93008 2570 aaPredicted RBP-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 RGPD8O14715 1765 aaPredicted RBP-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 RGPD5Q99666 1765 aa-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 LRRC9Q6ZRR7 1453 aa-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 MAGI2Q86UL8 1455 aa-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 HSD52Q0P140 79 aa-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 GTF2H5Q6ZYL4 71 aa-0.64□□□□□ -2.51
HMBOX1-216ENST00000561377 TMEM203Q969S6 136 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms