RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 FABP2P12104 132 aa8.76□□□□□ -1.01
SMAD3-214ENST00000560402 RPL37AP61513 92 aaKnown RBP8.76□□□□□ -1.01
SMAD3-214ENST00000560402 REG3AQ06141 175 aa8.76□□□□□ -1.01
SMAD3-214ENST00000560402 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
SMAD3-214ENST00000560402 LINC00269Q8N2A0 174 aa8.76□□□□□ -1.01
SMAD3-214ENST00000560402 C9orf163Q8N9P6 203 aa8.76□□□□□ -1.01
SMAD3-214ENST00000560402 H3BUT2 72 aa8.75□□□□□ -1.01
SMAD3-214ENST00000560402 XCL1P47992 114 aa8.75□□□□□ -1.01
SMAD3-214ENST00000560402 CD164L2Q6UWJ8 174 aa8.75□□□□□ -1.01
SMAD3-214ENST00000560402 COX7A2LO14548 114 aa8.74□□□□□ -1.01
SMAD3-214ENST00000560402 APOMO95445 188 aa8.74□□□□□ -1.01
SMAD3-214ENST00000560402 KRTAP26-1Q6PEX3 210 aa8.74□□□□□ -1.01
SMAD3-214ENST00000560402 CLPSL2Q6UWE3 100 aa8.74□□□□□ -1.01
SMAD3-214ENST00000560402 TOMM7Q9P0U1 55 aa8.74□□□□□ -1.01
SMAD3-214ENST00000560402 TRAV8-4A0A0B4J246 113 aa8.73□□□□□ -1.01
SMAD3-214ENST00000560402 MALP21145 153 aa8.73□□□□□ -1.01
SMAD3-214ENST00000560402 CXCL5P42830 114 aa8.73□□□□□ -1.01
SMAD3-214ENST00000560402 UBE2V1Q13404 147 aa8.73□□□□□ -1.01
SMAD3-214ENST00000560402 A0A1W2PPM0 123 aa8.72□□□□□ -1.01
SMAD3-214ENST00000560402 GAGE10A6NGK3 116 aa8.72□□□□□ -1.01
SMAD3-214ENST00000560402 K7ERJ3 54 aa8.72□□□□□ -1.01
SMAD3-214ENST00000560402 CNBPP62633 177 aaKnown RBP8.72□□□□□ -1.01
SMAD3-214ENST00000560402 CFAP161Q6P656 301 aa8.72□□□□□ -1.01
SMAD3-214ENST00000560402 C5orf38Q86SI9 138 aa8.72□□□□□ -1.01
SMAD3-214ENST00000560402 MUSTN1Q8IVN3 82 aa8.72□□□□□ -1.01
SMAD3-214ENST00000560402 Q8IZM0 81 aa8.72□□□□□ -1.01
SMAD3-214ENST00000560402 CHCHD10Q8WYQ3 142 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-214ENST00000560402 ZNF625Q96I27 306 aaPredicted RBP8.72□□□□□ -1.01
SMAD3-214ENST00000560402 A0A0B4J2C4 111 aa8.71□□□□□ -1.02
SMAD3-214ENST00000560402 C6orf226Q5I0X4 101 aa8.71□□□□□ -1.02
SMAD3-214ENST00000560402 PPDPFQ9H3Y8 114 aa8.71□□□□□ -1.02
SMAD3-214ENST00000560402 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.02
SMAD3-214ENST00000560402 A4D1N5 150 aa8.7□□□□□ -1.02
SMAD3-214ENST00000560402 CKS1BP61024 79 aa8.7□□□□□ -1.02
SMAD3-214ENST00000560402 LITAFQ99732 161 aa8.7□□□□□ -1.02
SMAD3-214ENST00000560402 SPCS1Q9Y6A9 102 aa8.7□□□□□ -1.02
SMAD3-214ENST00000560402 K7EP34 96 aa8.69□□□□□ -1.02
SMAD3-214ENST00000560402 SDIM1Q6ZPB5 146 aa8.69□□□□□ -1.02
SMAD3-214ENST00000560402 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.69□□□□□ -1.02
SMAD3-214ENST00000560402 IGLV10-54A0A075B6I4 117 aa8.68□□□□□ -1.02
SMAD3-214ENST00000560402 GAGE12HA6NDE8 117 aa8.67□□□□□ -1.02
SMAD3-214ENST00000560402 CFC1BP0CG36 223 aa8.67□□□□□ -1.02
SMAD3-214ENST00000560402 CFC1P0CG37 223 aa8.67□□□□□ -1.02
SMAD3-214ENST00000560402 Q1RN00 199 aa8.67□□□□□ -1.02
SMAD3-214ENST00000560402 ERG28Q9UKR5 140 aa8.67□□□□□ -1.02
SMAD3-214ENST00000560402 PLA2G2DQ9UNK4 145 aa8.67□□□□□ -1.02
SMAD3-214ENST00000560402 LINC00158P58513 81 aa8.66□□□□□ -1.02
SMAD3-214ENST00000560402 ADAMTSL4-AS1Q5T5F5 129 aa8.66□□□□□ -1.02
SMAD3-214ENST00000560402 LINC00308Q8TCZ7 52 aa8.66□□□□□ -1.02
SMAD3-214ENST00000560402 PANO1I0J062 215 aa8.65□□□□□ -1.02
SMAD3-214ENST00000560402 PSMB2P49721 201 aa8.65□□□□□ -1.02
SMAD3-214ENST00000560402 FOXI1Q12951 378 aa8.65□□□□□ -1.02
SMAD3-214ENST00000560402 Q6ZRU5 148 aa8.65□□□□□ -1.02
SMAD3-214ENST00000560402 NAA38Q9BRA0 125 aaKnown RBP8.65□□□□□ -1.02
SMAD3-214ENST00000560402 LOC107984156A0A0G2JMH3 177 aa8.64□□□□□ -1.03
SMAD3-214ENST00000560402 TSPAN13O95857 204 aa8.64□□□□□ -1.03
SMAD3-214ENST00000560402 ARL17AQ8IVW1 177 aa8.64□□□□□ -1.03
SMAD3-214ENST00000560402 SPACA4Q8TDM5 124 aa8.64□□□□□ -1.03
SMAD3-214ENST00000560402 TRBV20-1A0A075B6N2 111 aa8.63□□□□□ -1.03
SMAD3-214ENST00000560402 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
SMAD3-214ENST00000560402 COX6CP09669 75 aa8.63□□□□□ -1.03
SMAD3-214ENST00000560402 SCGB1C2P0DMR2 95 aa8.63□□□□□ -1.03
SMAD3-214ENST00000560402 NPC2P61916 151 aa8.63□□□□□ -1.03
SMAD3-214ENST00000560402 SPAG11BQ08648 103 aa8.63□□□□□ -1.03
SMAD3-214ENST00000560402 COX17Q14061 63 aa8.63□□□□□ -1.03
SMAD3-214ENST00000560402 DAND5Q8N907 189 aa8.62□□□□□ -1.03
SMAD3-214ENST00000560402 A0A087WYN8 130 aa8.61□□□□□ -1.03
SMAD3-214ENST00000560402 MIR7-3HGQ8N6C7 128 aa8.61□□□□□ -1.03
SMAD3-214ENST00000560402 C15orf56Q8N910 161 aa8.61□□□□□ -1.03
SMAD3-214ENST00000560402 PLAC8Q9NZF1 115 aa8.61□□□□□ -1.03
SMAD3-214ENST00000560402 UBR4Q5T4S7 5183 aa8.61□□□□□ -1.03
SMAD3-214ENST00000560402 TRAV13-2A0A0B4J235 113 aa8.6□□□□□ -1.03
SMAD3-214ENST00000560402 PFN2P35080 140 aa8.6□□□□□ -1.03
SMAD3-214ENST00000560402 C7orf33Q8WU49 177 aa8.6□□□□□ -1.03
SMAD3-214ENST00000560402 PKIGQ9Y2B9 76 aa8.6□□□□□ -1.03
SMAD3-214ENST00000560402 F8WDY8 70 aa8.59□□□□□ -1.03
SMAD3-214ENST00000560402 H7C2G1 150 aa8.59□□□□□ -1.03
SMAD3-214ENST00000560402 SLPIP03973 132 aa8.59□□□□□ -1.03
SMAD3-214ENST00000560402 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
SMAD3-214ENST00000560402 MT1HL1P0DM35 61 aa8.59□□□□□ -1.03
SMAD3-214ENST00000560402 RPL13AP40429 203 aaKnown RBP8.59□□□□□ -1.03
SMAD3-214ENST00000560402 DPH3Q96FX2 82 aa8.59□□□□□ -1.03
SMAD3-214ENST00000560402 SND1-IT1Q9HBX3 110 aa8.59□□□□□ -1.03
SMAD3-214ENST00000560402 GVQW2A0A096LPI5 108 aaPredicted RBP8.58□□□□□ -1.04
SMAD3-214ENST00000560402 ZNF561-AS1K7EIQ3 104 aa8.58□□□□□ -1.04
SMAD3-214ENST00000560402 KIAA0087Q14695 138 aa8.58□□□□□ -1.04
SMAD3-214ENST00000560402 TRBV30A0A0K0K1B3 111 aa8.57□□□□□ -1.04
SMAD3-214ENST00000560402 F8W1H4 67 aa8.56□□□□□ -1.04
SMAD3-214ENST00000560402 C2orf82Q6UX34 121 aa8.56□□□□□ -1.04
SMAD3-214ENST00000560402 ATXN8Q156A1 80 aa8.55□□□□□ -1.04
SMAD3-214ENST00000560402 HIGD2BQ4VC39 106 aa8.55□□□□□ -1.04
SMAD3-214ENST00000560402 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
SMAD3-214ENST00000560402 SOSTDC1Q6X4U4 206 aa8.54□□□□□ -1.04
SMAD3-214ENST00000560402 C2orf48Q96LS8 159 aa8.54□□□□□ -1.04
SMAD3-214ENST00000560402 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
SMAD3-214ENST00000560402 H3BMG7 143 aa8.53□□□□□ -1.04
SMAD3-214ENST00000560402 PRR3P79522 188 aaKnown RBP8.53□□□□□ -1.04
SMAD3-214ENST00000560402 TNXBP22105 4242 aa8.53□□□□□ -1.04
SMAD3-214ENST00000560402 IGKV2-24A0A0C4DH68 120 aa8.52□□□□□ -1.05
SMAD3-214ENST00000560402 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms