RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 FSHBP01225 129 aa13.28□□□□□ -0.28
SEMA4B-215ENST00000560089 NANOS2P60321 138 aaKnown RBP13.28□□□□□ -0.28
SEMA4B-215ENST00000560089 ANK3Q12955 4377 aaKnown RBP13.28□□□□□ -0.28
SEMA4B-215ENST00000560089 IGKV3OR2-268A0A0C4DH90 116 aa13.27□□□□□ -0.28
SEMA4B-215ENST00000560089 Q1T7F1 81 aa13.27□□□□□ -0.28
SEMA4B-215ENST00000560089 Q6ZRP5 223 aa13.27□□□□□ -0.29
SEMA4B-215ENST00000560089 PSPHP1O15172 72 aa13.26□□□□□ -0.29
SEMA4B-215ENST00000560089 PRR3P79522 188 aaKnown RBP13.26□□□□□ -0.29
SEMA4B-215ENST00000560089 hDV103S1A0JD37 113 aa13.25□□□□□ -0.29
SEMA4B-215ENST00000560089 UBE2L6O14933 153 aa13.25□□□□□ -0.29
SEMA4B-215ENST00000560089 KRTAP1-1Q07627 177 aa13.25□□□□□ -0.29
SEMA4B-215ENST00000560089 Q6YL49 198 aa13.25□□□□□ -0.29
SEMA4B-215ENST00000560089 HIGD2AQ9BW72 106 aa13.23□□□□□ -0.29
SEMA4B-215ENST00000560089 H3BUA1 57 aa13.22□□□□□ -0.29
SEMA4B-215ENST00000560089 C6orf99Q4VX62 202 aa13.21□□□□□ -0.29
SEMA4B-215ENST00000560089 C11orf44Q8N8P7 122 aa13.21□□□□□ -0.29
SEMA4B-215ENST00000560089 HIVEP2P31629 2446 aa13.21□□□□□ -0.29
SEMA4B-215ENST00000560089 SETXQ7Z333 2677 aaKnown RBP13.21□□□□□ -0.3
SEMA4B-215ENST00000560089 PDE6GP18545 87 aa13.21□□□□□ -0.3
SEMA4B-215ENST00000560089 HIVEP1P15822 2718 aa13.2□□□□□ -0.3
SEMA4B-215ENST00000560089 LINC00575Q6W349 94 aa13.19□□□□□ -0.3
SEMA4B-215ENST00000560089 OCR1Q9BZK8 76 aa13.19□□□□□ -0.3
SEMA4B-215ENST00000560089 C9orf66Q5T8R8 295 aa13.19□□□□□ -0.3
SEMA4B-215ENST00000560089 CD164L2Q6UWJ8 174 aa13.18□□□□□ -0.3
SEMA4B-215ENST00000560089 MUC7Q8TAX7 377 aa13.17□□□□□ -0.3
SEMA4B-215ENST00000560089 Q8N9L7 120 aa13.16□□□□□ -0.3
SEMA4B-215ENST00000560089 SPATA3Q8NHX4 192 aa13.16□□□□□ -0.3
SEMA4B-215ENST00000560089 RBM12B-AS1Q9P1G2 102 aa13.16□□□□□ -0.3
SEMA4B-215ENST00000560089 TRAV22A0A0B4J277 110 aa13.16□□□□□ -0.3
SEMA4B-215ENST00000560089 IGHV3OR16-9A0A0B4J2B5 98 aa13.16□□□□□ -0.3
SEMA4B-215ENST00000560089 C1orf64Q8NEQ6 169 aa13.16□□□□□ -0.3
SEMA4B-215ENST00000560089 ZNF702PQ9H963 129 aa13.16□□□□□ -0.3
SEMA4B-215ENST00000560089 ESM1Q9NQ30 184 aa13.16□□□□□ -0.3
SEMA4B-215ENST00000560089 C4orf48Q5BLP8 95 aa13.15□□□□□ -0.3
SEMA4B-215ENST00000560089 NIPBLQ6KC79 2804 aaeCLIP13.14□□□□□ -0.31
SEMA4B-215ENST00000560089 DNAJC9-AS1A6NH13 148 aa13.13□□□□□ -0.31
SEMA4B-215ENST00000560089 IGLV1-40P01703 118 aa13.13□□□□□ -0.31
SEMA4B-215ENST00000560089 KTN1-AS1Q86SY8 53 aa13.12□□□□□ -0.31
SEMA4B-215ENST00000560089 A8MTW9 85 aa13.11□□□□□ -0.31
SEMA4B-215ENST00000560089 DEFB131AP59861 70 aa13.11□□□□□ -0.31
SEMA4B-215ENST00000560089 C18orf65Q6ZTR6 163 aa13.1□□□□□ -0.31
SEMA4B-215ENST00000560089 A8MU10 97 aa13.1□□□□□ -0.31
SEMA4B-215ENST00000560089 Q6ZQY7 126 aa13.1□□□□□ -0.31
SEMA4B-215ENST00000560089 NSD1Q96L73 2696 aaPredicted RBP13.1□□□□□ -0.31
SEMA4B-215ENST00000560089 IGKV4-1P06312 121 aa13.09□□□□□ -0.31
SEMA4B-215ENST00000560089 LINC01006Q8NI28 216 aa13.09□□□□□ -0.31
SEMA4B-215ENST00000560089 FN1P02751 2386 aaKnown RBP13.09□□□□□ -0.31
SEMA4B-215ENST00000560089 TRGV1A0A0A0MS02 117 aa13.09□□□□□ -0.31
SEMA4B-215ENST00000560089 BAHCC1Q9P281 2608 aa13.08□□□□□ -0.32
SEMA4B-215ENST00000560089 DEFB136Q30KP8 78 aa13.08□□□□□ -0.32
SEMA4B-215ENST00000560089 KHDC1LQ5JSQ8 128 aa13.08□□□□□ -0.32
SEMA4B-215ENST00000560089 IGLV4-60A0A075B6I1 120 aa13.07□□□□□ -0.32
SEMA4B-215ENST00000560089 SYCNQ0VAF6 134 aa13.07□□□□□ -0.32
SEMA4B-215ENST00000560089 A8MUN3 132 aa13.07□□□□□ -0.32
SEMA4B-215ENST00000560089 UBE2BP63146 152 aa13.07□□□□□ -0.32
SEMA4B-215ENST00000560089 STHQ8IWL8 128 aa13.06□□□□□ -0.32
SEMA4B-215ENST00000560089 C2CD3Q4AC94 2353 aa13.05□□□□□ -0.32
SEMA4B-215ENST00000560089 WNK1Q9H4A3 2382 aa13.05□□□□□ -0.32
SEMA4B-215ENST00000560089 INAFM1C9JVW0 142 aa13.05□□□□□ -0.32
SEMA4B-215ENST00000560089 JMJD1CQ15652 2540 aa13.05□□□□□ -0.32
SEMA4B-215ENST00000560089 LINC00588Q9Y4M8 146 aa13.04□□□□□ -0.32
SEMA4B-215ENST00000560089 TEP1Q99973 2627 aaKnown RBP13.03□□□□□ -0.32
SEMA4B-215ENST00000560089 F8P00451 2351 aa13.02□□□□□ -0.32
SEMA4B-215ENST00000560089 H3BQ85 93 aa13.02□□□□□ -0.33
SEMA4B-215ENST00000560089 FAM30AQ9NZY2 134 aa13.02□□□□□ -0.33
SEMA4B-215ENST00000560089 LYRM9A8MSI8 78 aa13.01□□□□□ -0.33
SEMA4B-215ENST00000560089 INSP01308 110 aa13.01□□□□□ -0.33
SEMA4B-215ENST00000560089 C11orf45Q8TAV5 145 aa13.01□□□□□ -0.33
SEMA4B-215ENST00000560089 CELA1Q9UNI1 258 aa13□□□□□ -0.33
SEMA4B-215ENST00000560089 M0R378 163 aa12.99□□□□□ -0.33
SEMA4B-215ENST00000560089 Q8IZM0 81 aa12.99□□□□□ -0.33
SEMA4B-215ENST00000560089 PSCAO43653 123 aa12.98□□□□□ -0.33
SEMA4B-215ENST00000560089 Q8NDZ9 215 aa12.98□□□□□ -0.33
SEMA4B-215ENST00000560089 SLURP1P55000 103 aa12.98□□□□□ -0.33
SEMA4B-215ENST00000560089 TRGV2A0A075B6R0 118 aa12.97□□□□□ -0.33
SEMA4B-215ENST00000560089 LINC00959A0A1B0GUT2 108 aa12.97□□□□□ -0.33
SEMA4B-215ENST00000560089 LOC100131303A0A0U1RQF7 123 aa12.97□□□□□ -0.33
SEMA4B-215ENST00000560089 Q5VV11 94 aa12.96□□□□□ -0.33
SEMA4B-215ENST00000560089 COX7BP24311 80 aa12.96□□□□□ -0.34
SEMA4B-215ENST00000560089 PRR4Q16378 134 aa12.96□□□□□ -0.34
SEMA4B-215ENST00000560089 LINC00269Q8N2A0 174 aa12.96□□□□□ -0.34
SEMA4B-215ENST00000560089 SPTSSBQ8NFR3 76 aa12.96□□□□□ -0.34
SEMA4B-215ENST00000560089 TENM1Q9UKZ4 2725 aa12.95□□□□□ -0.34
SEMA4B-215ENST00000560089 CYSRT1A8MQ03 144 aa12.95□□□□□ -0.34
SEMA4B-215ENST00000560089 PRB2P02812 416 aaPredicted RBP12.95□□□□□ -0.34
SEMA4B-215ENST00000560089 UBE2AP49459 152 aa12.95□□□□□ -0.34
SEMA4B-215ENST00000560089 UBE2E2Q96LR5 201 aa12.95□□□□□ -0.34
SEMA4B-215ENST00000560089 SMIM29Q86T20 159 aa12.94□□□□□ -0.34
SEMA4B-215ENST00000560089 LINC00612Q8N6U2 182 aa12.94□□□□□ -0.34
SEMA4B-215ENST00000560089 COX17Q14061 63 aa12.93□□□□□ -0.34
SEMA4B-215ENST00000560089 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.93□□□□□ -0.34
SEMA4B-215ENST00000560089 TRBV6-8A0A0A6YYG3 113 aa12.93□□□□□ -0.34
SEMA4B-215ENST00000560089 C9orf116Q5BN46 136 aaPredicted RBP12.93□□□□□ -0.34
SEMA4B-215ENST00000560089 C16orf90A8MZG2 172 aa12.92□□□□□ -0.34
SEMA4B-215ENST00000560089 CHKB-CPT1BH3BT56 60 aa12.92□□□□□ -0.34
SEMA4B-215ENST00000560089 APOC4P55056 127 aa12.92□□□□□ -0.34
SEMA4B-215ENST00000560089 C10orf25Q5T742 122 aa12.92□□□□□ -0.34
SEMA4B-215ENST00000560089 NDUFS5O43920 106 aa12.91□□□□□ -0.34
SEMA4B-215ENST00000560089 LCE6AA0A183 80 aa12.9□□□□□ -0.34
SEMA4B-215ENST00000560089 CYP4F30PQ9H0H9 118 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms