RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TNRC18O15417 2968 aaPredicted RBP0.9□□□□□ -2.27
SPG11-218ENST00000559754 SSPOA2VEC9 5147 aa0.9□□□□□ -2.27
SPG11-218ENST00000559754 WDFY4Q6ZS81 3184 aa0.9□□□□□ -2.27
SPG11-218ENST00000559754 RGPD1P0DJD0 1748 aa0.89□□□□□ -2.27
SPG11-218ENST00000559754 CHD8Q9HCK8 2581 aa0.89□□□□□ -2.27
SPG11-218ENST00000559754 SETBP1Q9Y6X0 1596 aa0.89□□□□□ -2.27
SPG11-218ENST00000559754 LINC00959A0A1B0GUT2 108 aa0.89□□□□□ -2.27
SPG11-218ENST00000559754 CEBPZOSA8MTT3 80 aa0.89□□□□□ -2.27
SPG11-218ENST00000559754 I3L2K1 104 aa0.89□□□□□ -2.27
SPG11-218ENST00000559754 IGLC3P0DOY3 106 aa0.89□□□□□ -2.27
SPG11-218ENST00000559754 BVES-AS1Q5T3Y7 98 aa0.89□□□□□ -2.27
SPG11-218ENST00000559754 CELSR3Q9NYQ7 3312 aa0.88□□□□□ -2.27
SPG11-218ENST00000559754 NCOA2Q15596 1464 aa0.88□□□□□ -2.27
SPG11-218ENST00000559754 PRB3Q04118 309 aaPredicted RBP0.88□□□□□ -2.27
SPG11-218ENST00000559754 PIK3C2BO00750 1634 aa0.88□□□□□ -2.27
SPG11-218ENST00000559754 CCDC180Q9P1Z9 1646 aa0.88□□□□□ -2.27
SPG11-218ENST00000559754 BIVM-ERCC5R4GMW8 1640 aa0.88□□□□□ -2.27
SPG11-218ENST00000559754 ANKARQ7Z5J8 1434 aa0.88□□□□□ -2.27
SPG11-218ENST00000559754 CCDC88BA6NC98 1476 aa0.87□□□□□ -2.27
SPG11-218ENST00000559754 A0A1B0GUT8 65 aa0.87□□□□□ -2.27
SPG11-218ENST00000559754 H3BUT2 72 aa0.87□□□□□ -2.27
SPG11-218ENST00000559754 IGLC2P0DOY2 106 aa0.87□□□□□ -2.27
SPG11-218ENST00000559754 PIGYQ3MUY2 71 aa0.87□□□□□ -2.27
SPG11-218ENST00000559754 PRO0255Q9UI72 69 aa0.87□□□□□ -2.27
SPG11-218ENST00000559754 ANKRD17O75179 2603 aaKnown RBP0.86□□□□□ -2.27
SPG11-218ENST00000559754 HECTD1Q9ULT8 2610 aa0.86□□□□□ -2.27
SPG11-218ENST00000559754 NKTRP30414 1462 aaKnown RBP0.86□□□□□ -2.27
SPG11-218ENST00000559754 RNF213Q63HN8 5207 aa0.86□□□□□ -2.27
SPG11-218ENST00000559754 PIEZO1Q92508 2521 aa0.86□□□□□ -2.27
SPG11-218ENST00000559754 HERC1Q15751 4861 aa0.86□□□□□ -2.27
SPG11-218ENST00000559754 SLIT1O75093 1534 aa0.86□□□□□ -2.27
SPG11-218ENST00000559754 DEFB123Q8N688 67 aa0.86□□□□□ -2.27
SPG11-218ENST00000559754 POLR1AO95602 1720 aaPredicted RBP0.86□□□□□ -2.27
SPG11-218ENST00000559754 TIAM2Q8IVF5 1701 aa0.86□□□□□ -2.27
SPG11-218ENST00000559754 UBR3Q6ZT12 1888 aa0.86□□□□□ -2.27
SPG11-218ENST00000559754 FAT4Q6V0I7 4981 aa0.86□□□□□ -2.27
SPG11-218ENST00000559754 CCDC141Q6ZP82 1450 aa0.86□□□□□ -2.27
SPG11-218ENST00000559754 NSD1Q96L73 2696 aaPredicted RBP0.85□□□□□ -2.27
SPG11-218ENST00000559754 URB2Q14146 1524 aaKnown RBP0.85□□□□□ -2.27
SPG11-218ENST00000559754 CEP350Q5VT06 3117 aa0.85□□□□□ -2.27
SPG11-218ENST00000559754 ABCC8Q09428 1581 aa0.85□□□□□ -2.27
SPG11-218ENST00000559754 DEFB121Q5J5C9 76 aa0.85□□□□□ -2.27
SPG11-218ENST00000559754 MYO5CQ9NQX4 1742 aa0.85□□□□□ -2.27
SPG11-218ENST00000559754 A0A0C4DFX4 3053 aa0.85□□□□□ -2.27
SPG11-218ENST00000559754 UTRNP46939 3433 aa0.85□□□□□ -2.27
SPG11-218ENST00000559754 RYR3Q15413 4870 aa0.84□□□□□ -2.27
SPG11-218ENST00000559754 LRRC7Q96NW7 1537 aa0.84□□□□□ -2.27
SPG11-218ENST00000559754 CEP170BQ9Y4F5 1589 aaPredicted RBP0.84□□□□□ -2.27
SPG11-218ENST00000559754 Q8IZM0 81 aa0.84□□□□□ -2.27
SPG11-218ENST00000559754 MAGI3Q5TCQ9 1506 aa0.84□□□□□ -2.28
SPG11-218ENST00000559754 ARFGEF2Q9Y6D5 1785 aa0.83□□□□□ -2.28
SPG11-218ENST00000559754 ZNF292O60281 2723 aa0.83□□□□□ -2.28
SPG11-218ENST00000559754 CACNA1HO95180 2353 aa0.83□□□□□ -2.28
SPG11-218ENST00000559754 SPTBN4Q9H254 2564 aa0.83□□□□□ -2.28
SPG11-218ENST00000559754 IQGAP3Q86VI3 1631 aa0.83□□□□□ -2.28
SPG11-218ENST00000559754 BSNQ9UPA5 3926 aa0.83□□□□□ -2.28
SPG11-218ENST00000559754 GOLGA4Q13439 2230 aaKnown RBP0.83□□□□□ -2.28
SPG11-218ENST00000559754 PDZD2O15018 2839 aa0.83□□□□□ -2.28
SPG11-218ENST00000559754 C18orf32Q8TCD1 76 aa0.83□□□□□ -2.28
SPG11-218ENST00000559754 ITPR3Q14573 2671 aa0.83□□□□□ -2.28
SPG11-218ENST00000559754 PCNTO95613 3336 aa0.82□□□□□ -2.28
SPG11-218ENST00000559754 NESP48681 1621 aa0.82□□□□□ -2.28
SPG11-218ENST00000559754 PLCE1Q9P212 2302 aa0.82□□□□□ -2.28
SPG11-218ENST00000559754 ZNF831Q5JPB2 1677 aa0.82□□□□□ -2.28
SPG11-218ENST00000559754 MYO18BQ8IUG5 2567 aa0.82□□□□□ -2.28
SPG11-218ENST00000559754 DEFB112Q30KQ8 113 aa0.82□□□□□ -2.28
SPG11-218ENST00000559754 ATP5EP2Q5VTU8 51 aa0.82□□□□□ -2.28
SPG11-218ENST00000559754 MEGF8Q7Z7M0 2845 aa0.82□□□□□ -2.28
SPG11-218ENST00000559754 CFAP43Q8NDM7 1665 aa0.81□□□□□ -2.28
SPG11-218ENST00000559754 NAV2Q8IVL1 2488 aa0.81□□□□□ -2.28
SPG11-218ENST00000559754 NBEAL2Q6ZNJ1 2754 aa0.81□□□□□ -2.28
SPG11-218ENST00000559754 FMN2Q9NZ56 1722 aa0.81□□□□□ -2.28
SPG11-218ENST00000559754 URB1O60287 2271 aaKnown RBP0.81□□□□□ -2.28
SPG11-218ENST00000559754 EPG5Q9HCE0 2579 aa0.81□□□□□ -2.28
SPG11-218ENST00000559754 TSC2P49815 1807 aa0.81□□□□□ -2.28
SPG11-218ENST00000559754 NDUFB1O75438 58 aa0.81□□□□□ -2.28
SPG11-218ENST00000559754 USMG5Q96IX5 58 aa0.81□□□□□ -2.28
SPG11-218ENST00000559754 CHD6Q8TD26 2715 aa0.8□□□□□ -2.28
SPG11-218ENST00000559754 BCORQ6W2J9 1755 aa0.8□□□□□ -2.28
SPG11-218ENST00000559754 CLASP1Q7Z460 1538 aa0.8□□□□□ -2.28
SPG11-218ENST00000559754 KIAA0586Q9BVV6 1533 aa0.8□□□□□ -2.28
SPG11-218ENST00000559754 UGGT2Q9NYU1 1516 aa0.8□□□□□ -2.28
SPG11-218ENST00000559754 DNMBPQ6XZF7 1577 aa0.8□□□□□ -2.28
SPG11-218ENST00000559754 SMCO4Q9NRQ5 59 aa0.8□□□□□ -2.28
SPG11-218ENST00000559754 CCDC168Q8NDH2 2452 aa0.8□□□□□ -2.28
SPG11-218ENST00000559754 ABCA12Q86UK0 2595 aa0.8□□□□□ -2.28
SPG11-218ENST00000559754 DOPEY2Q9Y3R5 2298 aa0.8□□□□□ -2.28
SPG11-218ENST00000559754 CREBBPQ92793 2442 aa0.79□□□□□ -2.28
SPG11-218ENST00000559754 THOC2Q8NI27 1593 aaKnown RBP0.79□□□□□ -2.28
SPG11-218ENST00000559754 USP32Q8NFA0 1604 aa0.79□□□□□ -2.28
SPG11-218ENST00000559754 ZC3H13Q5T200 1668 aaKnown RBP0.79□□□□□ -2.28
SPG11-218ENST00000559754 DOT1LQ8TEK3 1739 aa0.79□□□□□ -2.28
SPG11-218ENST00000559754 K7EQZ3 153 aa0.79□□□□□ -2.28
SPG11-218ENST00000559754 SONP18583 2426 aaKnown RBP0.78□□□□□ -2.28
SPG11-218ENST00000559754 FXYD6-FXYD2A0A087WZ82 144 aa0.78□□□□□ -2.28
SPG11-218ENST00000559754 TRAV21A0A0B4J279 112 aa0.78□□□□□ -2.28
SPG11-218ENST00000559754 CFDP00746 253 aaPredicted RBP0.78□□□□□ -2.28
SPG11-218ENST00000559754 Q5VSD8 79 aa0.78□□□□□ -2.28
SPG11-218ENST00000559754 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
SPG11-218ENST00000559754 GAFA1Q96PS6 74 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms