RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 C3orf22Q8N5N4 141 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 LINC00612Q8N6U2 182 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 CLEC2BQ92478 149 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 LINC00526Q96FQ7 95 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 ZNF625Q96I27 306 aaPredicted RBP4.02□□□□□ -1.77
USP3-212ENST00000559276 CDKN2A-AS1Q9UH64 79 aa4.02□□□□□ -1.77
USP3-212ENST00000559276 FAM236AA0A1B0GUQ0 79 aa4.01□□□□□ -1.77
USP3-212ENST00000559276 FAM236BA0A1B0GV22 79 aa4.01□□□□□ -1.77
USP3-212ENST00000559276 F5H768 121 aa4.01□□□□□ -1.77
USP3-212ENST00000559276 KRTAP10-2P60368 255 aa4.01□□□□□ -1.77
USP3-212ENST00000559276 RPS28P62857 69 aaKnown RBP4.01□□□□□ -1.77
USP3-212ENST00000559276 RPL36AP83881 106 aaKnown RBP4.01□□□□□ -1.77
USP3-212ENST00000559276 Q8N1X5 172 aa4.01□□□□□ -1.77
USP3-212ENST00000559276 C11orf72Q8NBR9 251 aa4.01□□□□□ -1.77
USP3-212ENST00000559276 RPL36ALQ969Q0 106 aaKnown RBP4.01□□□□□ -1.77
USP3-212ENST00000559276 LINC01587Q99440 93 aa4.01□□□□□ -1.77
USP3-212ENST00000559276 Q9H8V8 135 aa4.01□□□□□ -1.77
USP3-212ENST00000559276 SMIM1B2RUZ4 78 aa4□□□□□ -1.77
USP3-212ENST00000559276 CRPP02741 224 aa4□□□□□ -1.77
USP3-212ENST00000559276 BAALC-AS2P0C853 105 aa4□□□□□ -1.77
USP3-212ENST00000559276 CRYGAP11844 174 aa4□□□□□ -1.77
USP3-212ENST00000559276 GYPEP15421 78 aa4□□□□□ -1.77
USP3-212ENST00000559276 HIST1H4AP62805 103 aaKnown RBP4□□□□□ -1.77
USP3-212ENST00000559276 ESRGQ1W209 222 aa4□□□□□ -1.77
USP3-212ENST00000559276 S100A7L2Q5SY68 101 aa4□□□□□ -1.77
USP3-212ENST00000559276 LINC00242Q5T6M2 205 aa4□□□□□ -1.77
USP3-212ENST00000559276 C9orf153Q5TBE3 101 aa4□□□□□ -1.77
USP3-212ENST00000559276 SMIM20Q8N5G0 67 aa4□□□□□ -1.77
USP3-212ENST00000559276 FAT1Q14517 4588 aa3.99□□□□□ -1.77
USP3-212ENST00000559276 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.99□□□□□ -1.77
USP3-212ENST00000559276 IGKV2-29A2NJV5 120 aaPredicted RBP3.99□□□□□ -1.77
USP3-212ENST00000559276 DNAL4O96015 105 aa3.99□□□□□ -1.77
USP3-212ENST00000559276 COX7CP15954 63 aa3.99□□□□□ -1.77
USP3-212ENST00000559276 CCL18P55774 89 aa3.99□□□□□ -1.77
USP3-212ENST00000559276 ATP5EP2Q5VTU8 51 aa3.99□□□□□ -1.77
USP3-212ENST00000559276 Q6JHZ5 121 aa3.99□□□□□ -1.77
USP3-212ENST00000559276 Q6ZRN7 208 aaPredicted RBP3.99□□□□□ -1.77
USP3-212ENST00000559276 C16orf74Q96GX8 76 aa3.99□□□□□ -1.77
USP3-212ENST00000559276 OBSCN-AS1Q96MR7 158 aa3.99□□□□□ -1.77
USP3-212ENST00000559276 UPK3BQ9BT76 320 aa3.99□□□□□ -1.77
USP3-212ENST00000559276 NOP10Q9NPE3 64 aaKnown RBP3.99□□□□□ -1.77
USP3-212ENST00000559276 VPS13BQ7Z7G8 4022 aa3.98□□□□□ -1.77
USP3-212ENST00000559276 IBA57-AS1B1ANH7 110 aa3.98□□□□□ -1.77
USP3-212ENST00000559276 J3KT08 172 aa3.98□□□□□ -1.77
USP3-212ENST00000559276 K7EQD1 137 aa3.98□□□□□ -1.77
USP3-212ENST00000559276 VPREB1P12018 145 aa3.98□□□□□ -1.77
USP3-212ENST00000559276 HTN1P15515 57 aa3.98□□□□□ -1.77
USP3-212ENST00000559276 SERTAD4-AS1Q5TG53 156 aa3.98□□□□□ -1.77
USP3-212ENST00000559276 CHCHD5Q9BSY4 110 aa3.98□□□□□ -1.77
USP3-212ENST00000559276 CDC42SE2Q9NRR3 84 aa3.98□□□□□ -1.77
USP3-212ENST00000559276 A0A096LPF7 62 aa3.97□□□□□ -1.77
USP3-212ENST00000559276 IGHV3-73A0A0B4J1V6 119 aa3.97□□□□□ -1.77
USP3-212ENST00000559276 H3BNG1 76 aa3.97□□□□□ -1.77
USP3-212ENST00000559276 FUSP35637 526 aaKnown RBP eCLIP3.97□□□□□ -1.77
USP3-212ENST00000559276 TMEM258P61165 79 aa3.97□□□□□ -1.77
USP3-212ENST00000559276 RPL18AQ02543 176 aaKnown RBP3.97□□□□□ -1.77
USP3-212ENST00000559276 Q6ZSN1 163 aa3.97□□□□□ -1.77
USP3-212ENST00000559276 Q6ZTI0 123 aa3.97□□□□□ -1.77
USP3-212ENST00000559276 LINC01561Q8N1V8 128 aa3.97□□□□□ -1.77
USP3-212ENST00000559276 DEFB104AQ8WTQ1 72 aa3.97□□□□□ -1.77
USP3-212ENST00000559276 TMEM243Q9BU79 118 aa3.97□□□□□ -1.77
USP3-212ENST00000559276 MYCBP2O75592 4640 aa3.96□□□□□ -1.77
USP3-212ENST00000559276 TRBV6-4A0A1B0GX49 114 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 NDUFC2-KCTD14E9PQ53 114 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 JMJD7-PLA2G4BH0Y9G9 81 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 H3BQ85 93 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 H3BS24 57 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 UBE2L6O14933 153 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 BCE1O60756 84 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 NPC2P61916 151 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 COX6A2Q02221 97 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 RNASE13Q5GAN3 156 aaKnown RBP3.96□□□□□ -1.78
USP3-212ENST00000559276 SOSTDC1Q6X4U4 206 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 SMCR5Q8TEV8 140 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 COX7B2Q8TF08 81 aa3.96□□□□□ -1.78
USP3-212ENST00000559276 TRBV10-3A0A0K0K1G6 114 aa3.95□□□□□ -1.78
USP3-212ENST00000559276 GAGE2AQ6NT46 116 aa3.95□□□□□ -1.78
USP3-212ENST00000559276 SERP2Q8N6R1 65 aa3.95□□□□□ -1.78
USP3-212ENST00000559276 SND1-IT1Q9HBX3 110 aa3.95□□□□□ -1.78
USP3-212ENST00000559276 C22orf24Q9Y442 160 aa3.95□□□□□ -1.78
USP3-212ENST00000559276 SRRM2Q9UQ35 2752 aaKnown RBP3.94□□□□□ -1.78
USP3-212ENST00000559276 A0A087WZ39 114 aa3.94□□□□□ -1.78
USP3-212ENST00000559276 TRGV1A0A0A0MS02 117 aa3.94□□□□□ -1.78
USP3-212ENST00000559276 TRAV13-1A0A0B4J241 112 aa3.94□□□□□ -1.78
USP3-212ENST00000559276 IGHV3-38A0A0C4DH36 116 aa3.94□□□□□ -1.78
USP3-212ENST00000559276 KRTAP10-1P60331 282 aa3.94□□□□□ -1.78
USP3-212ENST00000559276 OR13C6PQ8NH95 151 aa3.94□□□□□ -1.78
USP3-212ENST00000559276 C2orf48Q96LS8 159 aa3.94□□□□□ -1.78
USP3-212ENST00000559276 LINC00167Q96N53 147 aa3.94□□□□□ -1.78
USP3-212ENST00000559276 DNAH8Q96JB1 4490 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 IGKV2-28A0A075B6P5 120 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 IGHV3OR16-9A0A0B4J2B5 98 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 hADV29S1A0JD25 119 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 NDUFC2O95298 119 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 IGKV2D-28P01615 120 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 DNAH10OSP0CZ25 163 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 LINC00694P0DN24 101 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 NTM-AS1Q6ZSK4 140 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 MIR7-3HGQ8N6C7 128 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 LINC00337Q8N6G1 96 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms