RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 FAM19A5Q7Z5A7 132 aaPredicted RBP3.71□□□□□ -1.82
CTDSPL2-204ENST00000558966 KRTAP11-1Q8IUC1 163 aa3.71□□□□□ -1.82
CTDSPL2-204ENST00000558966 PSORS1C2Q9UIG4 136 aa3.71□□□□□ -1.82
CTDSPL2-204ENST00000558966 F8VRH5 84 aa3.7□□□□□ -1.82
CTDSPL2-204ENST00000558966 SPINK8P0C7L1 97 aa3.7□□□□□ -1.82
CTDSPL2-204ENST00000558966 IGLC3P0DOY3 106 aa3.7□□□□□ -1.82
CTDSPL2-204ENST00000558966 SRSF9Q13242 221 aaKnown RBP eCLIP3.7□□□□□ -1.82
CTDSPL2-204ENST00000558966 ZNF22P17026 224 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL2-204ENST00000558966 CXCL5P42830 114 aa3.69□□□□□ -1.82
CTDSPL2-204ENST00000558966 RAB5BP61020 215 aa3.69□□□□□ -1.82
CTDSPL2-204ENST00000558966 COX7B2Q8TF08 81 aa3.69□□□□□ -1.82
CTDSPL2-204ENST00000558966 M0QXV9 152 aa3.69□□□□□ -1.82
CTDSPL2-204ENST00000558966 NDUFA6P56556 154 aa3.69□□□□□ -1.82
CTDSPL2-204ENST00000558966 SPINK6Q6UWN8 80 aa3.69□□□□□ -1.82
CTDSPL2-204ENST00000558966 XAGE1AQ9HD64 81 aa3.69□□□□□ -1.82
CTDSPL2-204ENST00000558966 ATP5LO75964 103 aa3.68□□□□□ -1.82
CTDSPL2-204ENST00000558966 TRGC2P03986 189 aa3.68□□□□□ -1.82
CTDSPL2-204ENST00000558966 C1orf137Q5JT78 98 aa3.68□□□□□ -1.82
CTDSPL2-204ENST00000558966 CHCHD1Q96BP2 118 aaKnown RBP3.68□□□□□ -1.82
CTDSPL2-204ENST00000558966 C11orf86A6NJI1 115 aa3.67□□□□□ -1.82
CTDSPL2-204ENST00000558966 H3BRM9 83 aa3.67□□□□□ -1.82
CTDSPL2-204ENST00000558966 BAGE3Q86Y29 109 aa3.67□□□□□ -1.82
CTDSPL2-204ENST00000558966 LINC01600Q96MT4 127 aa3.67□□□□□ -1.82
CTDSPL2-204ENST00000558966 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
CTDSPL2-204ENST00000558966 FAM19A2Q8N3H0 131 aa3.67□□□□□ -1.82
CTDSPL2-204ENST00000558966 Q8N9P0 234 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL2-204ENST00000558966 COLCA2A8K830 154 aa3.66□□□□□ -1.82
CTDSPL2-204ENST00000558966 IGLV7-43P04211 117 aa3.66□□□□□ -1.82
CTDSPL2-204ENST00000558966 UBE2BP63146 152 aa3.66□□□□□ -1.82
CTDSPL2-204ENST00000558966 IFI27L1Q96BM0 104 aa3.66□□□□□ -1.82
CTDSPL2-204ENST00000558966 CHTOPQ9Y3Y2 248 aaKnown RBP3.66□□□□□ -1.82
CTDSPL2-204ENST00000558966 C22orf24Q9Y442 160 aa3.66□□□□□ -1.82
CTDSPL2-204ENST00000558966 TRAV12-1A0A0B4J245 112 aa3.65□□□□□ -1.82
CTDSPL2-204ENST00000558966 HSBP1O75506 76 aa3.65□□□□□ -1.82
CTDSPL2-204ENST00000558966 SERF1AO75920 110 aa3.65□□□□□ -1.82
CTDSPL2-204ENST00000558966 KRTAP10-8P60410 259 aa3.65□□□□□ -1.82
CTDSPL2-204ENST00000558966 TMEM170BQ5T4T1 132 aa3.65□□□□□ -1.82
CTDSPL2-204ENST00000558966 REG3GQ6UW15 175 aa3.65□□□□□ -1.82
CTDSPL2-204ENST00000558966 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
CTDSPL2-204ENST00000558966 NUPR1O60356 82 aa3.64□□□□□ -1.83
CTDSPL2-204ENST00000558966 TP73-AS1Q9UF72 201 aa3.64□□□□□ -1.83
CTDSPL2-204ENST00000558966 TMEM223A0PJW6 202 aa3.64□□□□□ -1.83
CTDSPL2-204ENST00000558966 H0Y9J4 135 aa3.64□□□□□ -1.83
CTDSPL2-204ENST00000558966 SCO1O75880 301 aa3.64□□□□□ -1.83
CTDSPL2-204ENST00000558966 PFN2P35080 140 aa3.64□□□□□ -1.83
CTDSPL2-204ENST00000558966 MRPL55Q7Z7F7 128 aaKnown RBP3.64□□□□□ -1.83
CTDSPL2-204ENST00000558966 ZNF625Q96I27 306 aaPredicted RBP3.64□□□□□ -1.83
CTDSPL2-204ENST00000558966 ERG28Q9UKR5 140 aa3.64□□□□□ -1.83
CTDSPL2-204ENST00000558966 IGKV2D-30A0A075B6S6 120 aa3.63□□□□□ -1.83
CTDSPL2-204ENST00000558966 DIRC1Q969H9 104 aa3.63□□□□□ -1.83
CTDSPL2-204ENST00000558966 LEPROTL1O95214 131 aa3.62□□□□□ -1.83
CTDSPL2-204ENST00000558966 KRTAP1-4P0C5Y4 121 aa3.62□□□□□ -1.83
CTDSPL2-204ENST00000558966 Q8NDZ9 215 aa3.62□□□□□ -1.83
CTDSPL2-204ENST00000558966 LINC00167Q96N53 147 aa3.62□□□□□ -1.83
CTDSPL2-204ENST00000558966 SND1-IT1Q9HBX3 110 aa3.62□□□□□ -1.83
CTDSPL2-204ENST00000558966 LRP2P98164 4655 aa3.62□□□□□ -1.83
CTDSPL2-204ENST00000558966 RPL37AP8A6NKH3 93 aa3.62□□□□□ -1.83
CTDSPL2-204ENST00000558966 H0Y8G0 127 aa3.62□□□□□ -1.83
CTDSPL2-204ENST00000558966 COX17Q14061 63 aa3.62□□□□□ -1.83
CTDSPL2-204ENST00000558966 SFTA2Q6UW10 78 aa3.62□□□□□ -1.83
CTDSPL2-204ENST00000558966 ZNF861PO60384 105 aa3.61□□□□□ -1.83
CTDSPL2-204ENST00000558966 BCE1O60756 84 aa3.61□□□□□ -1.83
CTDSPL2-204ENST00000558966 FABP4P15090 132 aa3.61□□□□□ -1.83
CTDSPL2-204ENST00000558966 NKAPP1Q8N9T2 125 aa3.61□□□□□ -1.83
CTDSPL2-204ENST00000558966 A0A0U1RRA0 63 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST1H2BKO60814 126 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST1H2BJP06899 126 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST1H2BOP23527 126 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST1H2BBP33778 126 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST1H2BDP58876 126 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 TSPEAR-AS2P59090 65 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST1H2BCP62807 126 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST2H2BEQ16778 126 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 SMIM29Q86T20 159 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST1H2BHQ93079 126 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST1H2BNQ99877 126 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HIST1H2BMQ99879 126 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 HSPB8Q9UJY1 196 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 IGKV2-28A0A075B6P5 120 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 IGKV2D-28P01615 120 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 LINC01547P58512 204 aaPredicted RBP3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 LINC00158P58513 81 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 KRTAP13-1Q8IUC0 172 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 PMCHL2Q9BQD1 86 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 NDUFA12Q9UI09 145 aa3.6□□□□□ -1.83
CTDSPL2-204ENST00000558966 IGLV1-50A0A075B6I6 118 aa3.59□□□□□ -1.83
CTDSPL2-204ENST00000558966 DPM2O94777 84 aa3.59□□□□□ -1.83
CTDSPL2-204ENST00000558966 SMIM13P0DJ93 91 aa3.59□□□□□ -1.83
CTDSPL2-204ENST00000558966 PLNP26678 52 aa3.59□□□□□ -1.83
CTDSPL2-204ENST00000558966 TMEM238C9JI98 176 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 LEPROTO15243 131 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 IGKCP01834 107 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 RPL28P46779 137 aaKnown RBP3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 HERV-K104P63124 156 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 MEIG1Q5JSS6 88 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 MYMXA0A1B0GTQ4 84 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 M0R378 163 aa3.58□□□□□ -1.84
CTDSPL2-204ENST00000558966 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms