RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 ATG5Q9H1Y0 275 aa1.7□□□□□ -2.14
LRRC28-212ENST00000558911 MRPL35Q9NZE8 188 aaKnown RBP1.7□□□□□ -2.14
LRRC28-212ENST00000558911 KLK9Q9UKQ9 250 aa1.7□□□□□ -2.14
LRRC28-212ENST00000558911 MYOFQ9NZM1 2061 aa1.7□□□□□ -2.14
LRRC28-212ENST00000558911 PLCE1Q9P212 2302 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 SNRNP200O75643 2136 aaKnown RBP1.69□□□□□ -2.14
LRRC28-212ENST00000558911 GOLGA4Q13439 2230 aaKnown RBP1.69□□□□□ -2.14
LRRC28-212ENST00000558911 TRAV13-2A0A0B4J235 113 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 TRAV12-3A0A0B4J271 114 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 TRBV10-1A0A0K0K1A3 114 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 hADV29S1A0JD25 119 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 NUPR2A6NF83 97 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 H3BQ15 152 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 IGLV3-19P01714 112 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 CCKP06307 115 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 Q0VG73 95 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 HCP5Q6MZN7 132 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 REG4Q9BYZ8 158 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 MRPL36Q9P0J6 103 aaKnown RBP1.69□□□□□ -2.14
LRRC28-212ENST00000558911 LINC00474Q9P2X8 69 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 C22orf24Q9Y442 160 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 DLG5Q8TDM6 1919 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 ANKRD36BQ8N2N9 1353 aa1.69□□□□□ -2.14
LRRC28-212ENST00000558911 IGKV3-7A0A075B6H7 116 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 HCG22E2RYF7 251 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 JMJD7-PLA2G4BH0Y9G9 81 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 NUPR1O60356 82 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 DNAL4O96015 105 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 GNG11P61952 73 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 LINC00299Q6ZSB3 139 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 COA5Q86WW8 74 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 DMAC1Q96GE9 116 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 NPVFQ9HCQ7 196 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 MYO7AQ13402 2215 aa1.68□□□□□ -2.14
LRRC28-212ENST00000558911 APOBP04114 4563 aaKnown RBP1.68□□□□□ -2.14
LRRC28-212ENST00000558911 BAZ2BQ9UIF8 2168 aaKnown RBP1.68□□□□□ -2.14
LRRC28-212ENST00000558911 PPLO60437 1756 aa1.67□□□□□ -2.14
LRRC28-212ENST00000558911 MYO18AQ92614 2054 aaKnown RBP1.67□□□□□ -2.14
LRRC28-212ENST00000558911 H3BQF6 201 aa1.67□□□□□ -2.14
LRRC28-212ENST00000558911 PIN1P1O15428 100 aa1.67□□□□□ -2.14
LRRC28-212ENST00000558911 FAM213BQ8TBF2 198 aa1.67□□□□□ -2.14
LRRC28-212ENST00000558911 LCN9Q8WX39 176 aa1.67□□□□□ -2.14
LRRC28-212ENST00000558911 TSLPQ969D9 159 aa1.67□□□□□ -2.14
LRRC28-212ENST00000558911 PSME4Q14997 1843 aa1.67□□□□□ -2.14
LRRC28-212ENST00000558911 UNC13CQ8NB66 2214 aa1.67□□□□□ -2.14
LRRC28-212ENST00000558911 A0A0J9YY99 117 aa1.66□□□□□ -2.14
LRRC28-212ENST00000558911 TRBV6-5A0A0K0K1A5 114 aa1.66□□□□□ -2.14
LRRC28-212ENST00000558911 IGKV1-17P01599 117 aa1.66□□□□□ -2.14
LRRC28-212ENST00000558911 IGLV3-1P01715 115 aa1.66□□□□□ -2.14
LRRC28-212ENST00000558911 C15orf53Q8NAA6 179 aa1.66□□□□□ -2.14
LRRC28-212ENST00000558911 MYOZ3Q8TDC0 251 aa1.66□□□□□ -2.14
LRRC28-212ENST00000558911 WFDC10AQ9H1F0 79 aa1.66□□□□□ -2.14
LRRC28-212ENST00000558911 DOCK10Q96BY6 2186 aa1.66□□□□□ -2.14
LRRC28-212ENST00000558911 DNAH6Q9C0G6 4158 aa1.65□□□□□ -2.14
LRRC28-212ENST00000558911 TRAV23DV6A0A075B6W5 121 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 NAP1L6A6NFF2 107 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 CRYM-AS1A6NIL9 109 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 SEC11AP67812 179 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 CCL8P80075 99 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 MPV17LQ2QL34 196 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 Q6ZRN7 208 aaPredicted RBP1.65□□□□□ -2.15
LRRC28-212ENST00000558911 CYP2G1PQ6ZSU1 146 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 NDUFA11Q86Y39 141 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 BET1LQ9NYM9 111 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 FREM1Q5H8C1 2179 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 MDC1Q14676 2089 aaKnown RBP1.65□□□□□ -2.15
LRRC28-212ENST00000558911 EXPH5Q8NEV8 1989 aa1.65□□□□□ -2.15
LRRC28-212ENST00000558911 ESPL1Q14674 2120 aa1.64□□□□□ -2.15
LRRC28-212ENST00000558911 TNRC6BQ9UPQ9 1833 aaKnown RBP1.64□□□□□ -2.15
LRRC28-212ENST00000558911 VPS13DQ5THJ4 4388 aa1.64□□□□□ -2.15
LRRC28-212ENST00000558911 TRBV7-1A0A0A6YYK4 115 aa1.64□□□□□ -2.15
LRRC28-212ENST00000558911 TEX49A0A1B0GTD5 131 aa1.64□□□□□ -2.15
LRRC28-212ENST00000558911 K7EP34 96 aa1.64□□□□□ -2.15
LRRC28-212ENST00000558911 ATOX1O00244 68 aa1.64□□□□□ -2.15
LRRC28-212ENST00000558911 SIX6O95475 246 aa1.64□□□□□ -2.15
LRRC28-212ENST00000558911 FAUP35544 74 aaKnown RBP1.64□□□□□ -2.15
LRRC28-212ENST00000558911 UBE2D1P51668 147 aa1.64□□□□□ -2.15
LRRC28-212ENST00000558911 KRTDAPP60985 99 aa1.64□□□□□ -2.15
LRRC28-212ENST00000558911 RPL37AP61513 92 aaKnown RBP1.64□□□□□ -2.15
LRRC28-212ENST00000558911 CYP4F30PQ9H0H9 118 aa1.64□□□□□ -2.15
LRRC28-212ENST00000558911 DNAH11Q96DT5 4516 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 CCDC141Q6ZP82 1450 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 UQCRHLA0A096LP55 91 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 IGHV3-30P01768 117 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 UQCRHP07919 91 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 NMBP08949 121 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 IGHV3-30-5P0DP03 117 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 PDE6GP18545 87 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 C10orf128Q5T292 105 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 ZNF818PQ6ZRF7 136 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 TMEM14CQ9P0S9 112 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 DNAH5Q8TE73 4624 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 CACNA1CQ13936 2221 aa1.63□□□□□ -2.15
LRRC28-212ENST00000558911 ALPK2Q86TB3 2170 aa1.62□□□□□ -2.15
LRRC28-212ENST00000558911 TRBV7-7A0A0K0K1E9 115 aa1.62□□□□□ -2.15
LRRC28-212ENST00000558911 SFT2D2O95562 160 aa1.62□□□□□ -2.15
LRRC28-212ENST00000558911 GYPAP02724 150 aa1.62□□□□□ -2.15
LRRC28-212ENST00000558911 PEA15Q15121 130 aa1.62□□□□□ -2.15
LRRC28-212ENST00000558911 BRD3OSQ6XYD6 125 aa1.62□□□□□ -2.15
LRRC28-212ENST00000558911 AMELYQ99218 206 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms