RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 TINCRA0A1B0GVN0 87 aa6.51□□□□□ -1.37
SMAD3-206ENST00000558739 PCOTHQ58A44 107 aa6.51□□□□□ -1.37
SMAD3-206ENST00000558739 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
SMAD3-206ENST00000558739 NEBP20929 6669 aa6.51□□□□□ -1.37
SMAD3-206ENST00000558739 LINC00614P0C842 121 aa6.5□□□□□ -1.37
SMAD3-206ENST00000558739 DAND5Q8N907 189 aa6.5□□□□□ -1.37
SMAD3-206ENST00000558739 CST9LQ9H4G1 147 aa6.5□□□□□ -1.37
SMAD3-206ENST00000558739 SMCO4Q9NRQ5 59 aa6.5□□□□□ -1.37
SMAD3-206ENST00000558739 TP73-AS1Q9UF72 201 aa6.5□□□□□ -1.37
SMAD3-206ENST00000558739 SMIM1B2RUZ4 78 aa6.49□□□□□ -1.37
SMAD3-206ENST00000558739 PMVKQ15126 192 aa6.49□□□□□ -1.37
SMAD3-206ENST00000558739 C6orf226Q5I0X4 101 aa6.49□□□□□ -1.37
SMAD3-206ENST00000558739 GEMIN7Q9H840 131 aaKnown RBP6.49□□□□□ -1.37
SMAD3-206ENST00000558739 SCO1O75880 301 aa6.48□□□□□ -1.37
SMAD3-206ENST00000558739 PRSS2P07478 247 aa6.48□□□□□ -1.37
SMAD3-206ENST00000558739 PDZD11Q5EBL8 140 aa6.48□□□□□ -1.37
SMAD3-206ENST00000558739 SPAG11AQ6PDA7 123 aa6.48□□□□□ -1.37
SMAD3-206ENST00000558739 Q8NBF4 154 aa6.48□□□□□ -1.37
SMAD3-206ENST00000558739 CXCL5P42830 114 aa6.47□□□□□ -1.37
SMAD3-206ENST00000558739 CKS1BP61024 79 aa6.47□□□□□ -1.37
SMAD3-206ENST00000558739 TOMM7Q9P0U1 55 aa6.47□□□□□ -1.37
SMAD3-206ENST00000558739 F8VRH5 84 aa6.46□□□□□ -1.38
SMAD3-206ENST00000558739 HBDP02042 147 aa6.46□□□□□ -1.38
SMAD3-206ENST00000558739 IGLC3P0DOY3 106 aa6.46□□□□□ -1.38
SMAD3-206ENST00000558739 RAB5BP61020 215 aa6.46□□□□□ -1.38
SMAD3-206ENST00000558739 IGKV2-28A0A075B6P5 120 aa6.45□□□□□ -1.38
SMAD3-206ENST00000558739 IGKV2D-28P01615 120 aa6.45□□□□□ -1.38
SMAD3-206ENST00000558739 COX7B2Q8TF08 81 aa6.45□□□□□ -1.38
SMAD3-206ENST00000558739 PLEKHB2Q96CS7 222 aa6.45□□□□□ -1.38
SMAD3-206ENST00000558739 IGLV5-39A0A0G2JS06 123 aa6.44□□□□□ -1.38
SMAD3-206ENST00000558739 PMCHL1Q16048 86 aa6.44□□□□□ -1.38
SMAD3-206ENST00000558739 CBLN2Q8IUK8 224 aa6.44□□□□□ -1.38
SMAD3-206ENST00000558739 TMEM238C9JI98 176 aa6.43□□□□□ -1.38
SMAD3-206ENST00000558739 ATP5LO75964 103 aa6.43□□□□□ -1.38
SMAD3-206ENST00000558739 SPINK8P0C7L1 97 aa6.43□□□□□ -1.38
SMAD3-206ENST00000558739 ZNF22P17026 224 aaPredicted RBP6.43□□□□□ -1.38
SMAD3-206ENST00000558739 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
SMAD3-206ENST00000558739 SLC7A5P1Q8MH63 180 aa6.43□□□□□ -1.38
SMAD3-206ENST00000558739 CHCHD1Q96BP2 118 aaKnown RBP6.43□□□□□ -1.38
SMAD3-206ENST00000558739 H3BRM9 83 aa6.42□□□□□ -1.38
SMAD3-206ENST00000558739 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
SMAD3-206ENST00000558739 Q8N377 158 aa6.42□□□□□ -1.38
SMAD3-206ENST00000558739 FAM19A1Q7Z5A9 133 aa6.41□□□□□ -1.38
SMAD3-206ENST00000558739 TRAV12-1A0A0B4J245 112 aa6.4□□□□□ -1.38
SMAD3-206ENST00000558739 C11orf86A6NJI1 115 aa6.4□□□□□ -1.38
SMAD3-206ENST00000558739 NDUFA6P56556 154 aa6.4□□□□□ -1.38
SMAD3-206ENST00000558739 BAGE3Q86Y29 109 aa6.4□□□□□ -1.38
SMAD3-206ENST00000558739 TRGC2P03986 189 aa6.39□□□□□ -1.39
SMAD3-206ENST00000558739 SPRR4Q96PI1 79 aa6.39□□□□□ -1.39
SMAD3-206ENST00000558739 NDUFA12Q9UI09 145 aa6.39□□□□□ -1.39
SMAD3-206ENST00000558739 COLCA2A8K830 154 aa6.38□□□□□ -1.39
SMAD3-206ENST00000558739 SPINK1P00995 79 aa6.38□□□□□ -1.39
SMAD3-206ENST00000558739 LINC00310P59036 64 aa6.38□□□□□ -1.39
SMAD3-206ENST00000558739 IFI27L1Q96BM0 104 aa6.38□□□□□ -1.39
SMAD3-206ENST00000558739 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
SMAD3-206ENST00000558739 TMEM126AQ9H061 195 aa6.38□□□□□ -1.39
SMAD3-206ENST00000558739 CHTOPQ9Y3Y2 248 aaKnown RBP6.38□□□□□ -1.39
SMAD3-206ENST00000558739 IGLV5-37A0A075B6J1 123 aa6.37□□□□□ -1.39
SMAD3-206ENST00000558739 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
SMAD3-206ENST00000558739 M0R378 163 aa6.36□□□□□ -1.39
SMAD3-206ENST00000558739 LCE2BO14633 110 aa6.36□□□□□ -1.39
SMAD3-206ENST00000558739 HSBP1O75506 76 aa6.36□□□□□ -1.39
SMAD3-206ENST00000558739 COX17Q14061 63 aa6.36□□□□□ -1.39
SMAD3-206ENST00000558739 TMEM170BQ5T4T1 132 aa6.36□□□□□ -1.39
SMAD3-206ENST00000558739 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
SMAD3-206ENST00000558739 NKAPP1Q8N9T2 125 aa6.36□□□□□ -1.39
SMAD3-206ENST00000558739 ZNF625Q96I27 306 aaPredicted RBP6.36□□□□□ -1.39
SMAD3-206ENST00000558739 TMEM223A0PJW6 202 aa6.35□□□□□ -1.39
SMAD3-206ENST00000558739 SFTA2Q6UW10 78 aa6.35□□□□□ -1.39
SMAD3-206ENST00000558739 ERG28Q9UKR5 140 aa6.35□□□□□ -1.39
SMAD3-206ENST00000558739 C9orf92A6NGG3 77 aa6.34□□□□□ -1.39
SMAD3-206ENST00000558739 SERF1AO75920 110 aa6.34□□□□□ -1.39
SMAD3-206ENST00000558739 PFN2P35080 140 aa6.33□□□□□ -1.4
SMAD3-206ENST00000558739 LEPROTL1O95214 131 aa6.32□□□□□ -1.4
SMAD3-206ENST00000558739 CFC1P0CG37 223 aa6.32□□□□□ -1.4
SMAD3-206ENST00000558739 VPREB1P12018 145 aa6.32□□□□□ -1.4
SMAD3-206ENST00000558739 SND1-IT1Q9HBX3 110 aa6.32□□□□□ -1.4
SMAD3-206ENST00000558739 SLC25A20O43772 301 aa6.31□□□□□ -1.4
SMAD3-206ENST00000558739 MUC12Q9UKN1 5478 aa6.31□□□□□ -1.4
SMAD3-206ENST00000558739 Q8NDZ9 215 aa6.3□□□□□ -1.4
SMAD3-206ENST00000558739 MOBPQ13875 183 aa6.29□□□□□ -1.4
SMAD3-206ENST00000558739 KRTAP6-3Q3LI67 103 aa6.29□□□□□ -1.4
SMAD3-206ENST00000558739 HSPB8Q9UJY1 196 aa6.29□□□□□ -1.4
SMAD3-206ENST00000558739 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
SMAD3-206ENST00000558739 HERV-K104P63124 156 aa6.28□□□□□ -1.4
SMAD3-206ENST00000558739 RPL24P83731 157 aaKnown RBP6.28□□□□□ -1.4
SMAD3-206ENST00000558739 IGLV9-49A0A0B4J1Y8 123 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST1H2BKO60814 126 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST1H2BJP06899 126 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 FABP4P15090 132 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST1H2BOP23527 126 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 PLNP26678 52 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST1H2BBP33778 126 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST1H2BDP58876 126 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST1H2BCP62807 126 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST2H2BEQ16778 126 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST1H2BHQ93079 126 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST1H2BNQ99877 126 aa6.27□□□□□ -1.41
SMAD3-206ENST00000558739 HIST1H2BMQ99879 126 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms