RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 COPS9Q8WXC6 57 aa8.9□□□□□ -0.98
TMED3-205ENST00000558562 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.89□□□□□ -0.99
TMED3-205ENST00000558562 C9orf118A6NHY6 69 aa8.89□□□□□ -0.99
TMED3-205ENST00000558562 LINC00158P58513 81 aa8.89□□□□□ -0.99
TMED3-205ENST00000558562 LINC00308Q8TCZ7 52 aa8.89□□□□□ -0.99
TMED3-205ENST00000558562 RMI2Q96E14 147 aa8.89□□□□□ -0.99
TMED3-205ENST00000558562 ERG28Q9UKR5 140 aa8.89□□□□□ -0.99
TMED3-205ENST00000558562 FAM229AH3BQW9 127 aa8.88□□□□□ -0.99
TMED3-205ENST00000558562 A0A0B4J2C4 111 aa8.87□□□□□ -0.99
TMED3-205ENST00000558562 H3BUT2 72 aa8.87□□□□□ -0.99
TMED3-205ENST00000558562 CFC1BP0CG36 223 aa8.87□□□□□ -0.99
TMED3-205ENST00000558562 CFC1P0CG37 223 aa8.87□□□□□ -0.99
TMED3-205ENST00000558562 PFN2P35080 140 aa8.87□□□□□ -0.99
TMED3-205ENST00000558562 MIR7-3HGQ8N6C7 128 aa8.87□□□□□ -0.99
TMED3-205ENST00000558562 NAA38Q9BRA0 125 aaKnown RBP8.87□□□□□ -0.99
TMED3-205ENST00000558562 SOSTDC1Q6X4U4 206 aa8.86□□□□□ -0.99
TMED3-205ENST00000558562 LINC00526Q96FQ7 95 aa8.86□□□□□ -0.99
TMED3-205ENST00000558562 PPDPFQ9H3Y8 114 aa8.86□□□□□ -0.99
TMED3-205ENST00000558562 HMCN2Q8NDA2 5059 aa8.85□□□□□ -0.99
TMED3-205ENST00000558562 ZNF561-AS1K7EIQ3 104 aa8.85□□□□□ -0.99
TMED3-205ENST00000558562 HIGD2BQ4VC39 106 aa8.85□□□□□ -0.99
TMED3-205ENST00000558562 C15orf56Q8N910 161 aa8.85□□□□□ -0.99
TMED3-205ENST00000558562 A0A087WTM6 91 aa8.84□□□□□ -0.99
TMED3-205ENST00000558562 EIF4EBP3O60516 100 aaPredicted RBP8.84□□□□□ -0.99
TMED3-205ENST00000558562 VAMP3Q15836 100 aa8.84□□□□□ -0.99
TMED3-205ENST00000558562 UNQ6190/PRO20217Q6UXQ8 127 aa8.84□□□□□ -0.99
TMED3-205ENST00000558562 NTN5Q8WTR8 489 aaPredicted RBP8.84□□□□□ -0.99
TMED3-205ENST00000558562 PRO1854Q9UHT4 67 aa8.84□□□□□ -0.99
TMED3-205ENST00000558562 A0A1W2PPM0 123 aa8.83□□□□□ -1
TMED3-205ENST00000558562 TSPAN13O95857 204 aa8.83□□□□□ -1
TMED3-205ENST00000558562 COX17Q14061 63 aa8.83□□□□□ -1
TMED3-205ENST00000558562 C10orf25Q5T742 122 aa8.83□□□□□ -1
TMED3-205ENST00000558562 GVQW2A0A096LPI5 108 aaPredicted RBP8.82□□□□□ -1
TMED3-205ENST00000558562 C2orf48Q96LS8 159 aa8.82□□□□□ -1
TMED3-205ENST00000558562 CAMK2N2Q96S95 79 aa8.82□□□□□ -1
TMED3-205ENST00000558562 FABP2P12104 132 aa8.81□□□□□ -1
TMED3-205ENST00000558562 C9orf116Q5BN46 136 aaPredicted RBP8.81□□□□□ -1
TMED3-205ENST00000558562 TRBV30A0A0K0K1B3 111 aa8.8□□□□□ -1
TMED3-205ENST00000558562 F8WDY8 70 aa8.8□□□□□ -1
TMED3-205ENST00000558562 SND1-IT1Q9HBX3 110 aa8.8□□□□□ -1
TMED3-205ENST00000558562 C6orf48Q9UBA6 75 aa8.8□□□□□ -1
TMED3-205ENST00000558562 H7C2G1 150 aa8.79□□□□□ -1
TMED3-205ENST00000558562 RPL13AP40429 203 aaKnown RBP8.79□□□□□ -1
TMED3-205ENST00000558562 Q1RN00 199 aa8.79□□□□□ -1
TMED3-205ENST00000558562 KRTAP29-1A8MX34 341 aaPredicted RBP8.78□□□□□ -1
TMED3-205ENST00000558562 USP17L23D6RBM5 183 aa8.78□□□□□ -1
TMED3-205ENST00000558562 Q6ZRU5 148 aa8.78□□□□□ -1
TMED3-205ENST00000558562 SPCS1Q9Y6A9 102 aa8.78□□□□□ -1
TMED3-205ENST00000558562 LRP1Q07954 4544 aaKnown RBP8.78□□□□□ -1
TMED3-205ENST00000558562 DNAH8Q96JB1 4490 aa8.77□□□□□ -1.01
TMED3-205ENST00000558562 GAGE10A6NGK3 116 aa8.77□□□□□ -1.01
TMED3-205ENST00000558562 K7EP34 96 aa8.77□□□□□ -1.01
TMED3-205ENST00000558562 LYRM7Q5U5X0 104 aa8.77□□□□□ -1.01
TMED3-205ENST00000558562 GTF2H5Q6ZYL4 71 aa8.77□□□□□ -1.01
TMED3-205ENST00000558562 IGLV5-52A0A0A0MRZ9 124 aa8.76□□□□□ -1.01
TMED3-205ENST00000558562 LOC107984156A0A0G2JMH3 177 aa8.76□□□□□ -1.01
TMED3-205ENST00000558562 PSMB2P49721 201 aa8.76□□□□□ -1.01
TMED3-205ENST00000558562 SYCNQ0VAF6 134 aa8.76□□□□□ -1.01
TMED3-205ENST00000558562 UBE2V1Q13404 147 aa8.76□□□□□ -1.01
TMED3-205ENST00000558562 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
TMED3-205ENST00000558562 TRAV13-2A0A0B4J235 113 aa8.75□□□□□ -1.01
TMED3-205ENST00000558562 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
TMED3-205ENST00000558562 CARD19Q96LW7 228 aa8.75□□□□□ -1.01
TMED3-205ENST00000558562 FAM30AQ9NZY2 134 aa8.75□□□□□ -1.01
TMED3-205ENST00000558562 PSCAO43653 123 aa8.74□□□□□ -1.01
TMED3-205ENST00000558562 IGKV2-28A0A075B6P5 120 aa8.73□□□□□ -1.01
TMED3-205ENST00000558562 LECT2O14960 151 aa8.73□□□□□ -1.01
TMED3-205ENST00000558562 IGKV2D-28P01615 120 aa8.73□□□□□ -1.01
TMED3-205ENST00000558562 NDUFC2O95298 119 aa8.72□□□□□ -1.01
TMED3-205ENST00000558562 PLA2G1BP04054 148 aaKnown RBP8.72□□□□□ -1.01
TMED3-205ENST00000558562 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
TMED3-205ENST00000558562 RNF151Q2KHN1 245 aa8.72□□□□□ -1.01
TMED3-205ENST00000558562 LINC00337Q8N6G1 96 aa8.72□□□□□ -1.01
TMED3-205ENST00000558562 TRIAP1O43715 76 aa8.71□□□□□ -1.02
TMED3-205ENST00000558562 PLA2G2DQ9UNK4 145 aa8.71□□□□□ -1.02
TMED3-205ENST00000558562 NDUFC2-KCTD14E9PQ53 114 aa8.7□□□□□ -1.02
TMED3-205ENST00000558562 LINC00528Q8N1L1 170 aa8.7□□□□□ -1.02
TMED3-205ENST00000558562 LRCOL1A6NCL2 159 aa8.69□□□□□ -1.02
TMED3-205ENST00000558562 COX6CP09669 75 aa8.69□□□□□ -1.02
TMED3-205ENST00000558562 WFDC2Q14508 124 aa8.69□□□□□ -1.02
TMED3-205ENST00000558562 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
TMED3-205ENST00000558562 OR13C6PQ8NH95 151 aa8.69□□□□□ -1.02
TMED3-205ENST00000558562 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
TMED3-205ENST00000558562 FAT3Q8TDW7 4589 aa8.69□□□□□ -1.02
TMED3-205ENST00000558562 NCR3O14931 201 aa8.68□□□□□ -1.02
TMED3-205ENST00000558562 TCL1BO95988 128 aa8.68□□□□□ -1.02
TMED3-205ENST00000558562 SLPIP03973 132 aa8.68□□□□□ -1.02
TMED3-205ENST00000558562 Q8N814 137 aa8.68□□□□□ -1.02
TMED3-205ENST00000558562 TRBV20-1A0A075B6N2 111 aa8.67□□□□□ -1.02
TMED3-205ENST00000558562 TLX1NBP0CAT3 122 aa8.67□□□□□ -1.02
TMED3-205ENST00000558562 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
TMED3-205ENST00000558562 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
TMED3-205ENST00000558562 Q8NDZ9 215 aa8.67□□□□□ -1.02
TMED3-205ENST00000558562 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
TMED3-205ENST00000558562 PRR3P79522 188 aaKnown RBP8.66□□□□□ -1.02
TMED3-205ENST00000558562 Q6ZRP5 223 aa8.66□□□□□ -1.02
TMED3-205ENST00000558562 H3BMG7 143 aa8.65□□□□□ -1.02
TMED3-205ENST00000558562 RPL28P46779 137 aaKnown RBP8.65□□□□□ -1.02
TMED3-205ENST00000558562 SMIM11BQ8TCY0 68 aa8.65□□□□□ -1.02
TMED3-205ENST00000558562 TRBV10-2A0A0K0K1G8 114 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms