RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 RETNLBQ9BQ08 111 aa13.26□□□□□ -0.29
RIPK3-207ENST00000557662 FAT4Q6V0I7 4981 aa13.25□□□□□ -0.29
RIPK3-207ENST00000557662 TRAPPC1Q9Y5R8 145 aa13.25□□□□□ -0.29
RIPK3-207ENST00000557662 TPRXLQ17RH7 258 aa13.24□□□□□ -0.29
RIPK3-207ENST00000557662 LCE2AQ5TA79 106 aaPredicted RBP13.24□□□□□ -0.29
RIPK3-207ENST00000557662 A0A0U1RQV1 116 aa13.23□□□□□ -0.29
RIPK3-207ENST00000557662 BAGE3Q86Y29 109 aa13.23□□□□□ -0.29
RIPK3-207ENST00000557662 IGKV2D-26A0A0A0MRZ7 120 aa13.22□□□□□ -0.29
RIPK3-207ENST00000557662 TMEM170BQ5T4T1 132 aa13.21□□□□□ -0.29
RIPK3-207ENST00000557662 C3orf22Q8N5N4 141 aa13.2□□□□□ -0.3
RIPK3-207ENST00000557662 TMEM223A0PJW6 202 aa13.18□□□□□ -0.3
RIPK3-207ENST00000557662 CBLN2Q8IUK8 224 aa13.18□□□□□ -0.3
RIPK3-207ENST00000557662 CHTOPQ9Y3Y2 248 aaKnown RBP13.17□□□□□ -0.3
RIPK3-207ENST00000557662 TRAV12-1A0A0B4J245 112 aa13.16□□□□□ -0.3
RIPK3-207ENST00000557662 YPEL4Q96NS1 127 aa13.16□□□□□ -0.3
RIPK3-207ENST00000557662 SPRR4Q96PI1 79 aa13.16□□□□□ -0.3
RIPK3-207ENST00000557662 IGLV7-46A0A075B6I9 117 aa13.14□□□□□ -0.31
RIPK3-207ENST00000557662 SPRR1AP35321 89 aa13.14□□□□□ -0.31
RIPK3-207ENST00000557662 LINC00158P58513 81 aa13.14□□□□□ -0.31
RIPK3-207ENST00000557662 HIGD2AQ9BW72 106 aa13.14□□□□□ -0.31
RIPK3-207ENST00000557662 KRTAP4-16G5E9R7 235 aaPredicted RBP13.13□□□□□ -0.31
RIPK3-207ENST00000557662 IFI27L1Q96BM0 104 aa13.11□□□□□ -0.31
RIPK3-207ENST00000557662 CHCHD1Q96BP2 118 aaKnown RBP13.11□□□□□ -0.31
RIPK3-207ENST00000557662 PRYO14603 147 aa13.1□□□□□ -0.31
RIPK3-207ENST00000557662 SPAG11AQ6PDA7 123 aa13.1□□□□□ -0.31
RIPK3-207ENST00000557662 CDIP1Q9H305 208 aa13.1□□□□□ -0.31
RIPK3-207ENST00000557662 A0A0U1RRA0 63 aa13.09□□□□□ -0.31
RIPK3-207ENST00000557662 APOC3P02656 99 aa13.09□□□□□ -0.31
RIPK3-207ENST00000557662 SMIM13P0DJ93 91 aa13.09□□□□□ -0.31
RIPK3-207ENST00000557662 LINC00337Q8N6G1 96 aa13.09□□□□□ -0.31
RIPK3-207ENST00000557662 KCNQ1DNQ9H478 68 aa13.09□□□□□ -0.31
RIPK3-207ENST00000557662 KRTAP9-2Q9BYQ4 174 aa13.08□□□□□ -0.32
RIPK3-207ENST00000557662 SNAPINO95295 136 aa13.06□□□□□ -0.32
RIPK3-207ENST00000557662 BOD1L2Q8IYS8 172 aa13.06□□□□□ -0.32
RIPK3-207ENST00000557662 SVBPQ8N300 66 aa13.06□□□□□ -0.32
RIPK3-207ENST00000557662 MIR7-3HGQ8N6C7 128 aa13.06□□□□□ -0.32
RIPK3-207ENST00000557662 PPDPFQ9H3Y8 114 aa13.06□□□□□ -0.32
RIPK3-207ENST00000557662 HERV-K104P63124 156 aa13.05□□□□□ -0.32
RIPK3-207ENST00000557662 ZNF706Q9Y5V0 76 aaPredicted RBP13.05□□□□□ -0.32
RIPK3-207ENST00000557662 FP248Q71RG6 208 aaPredicted RBP13.04□□□□□ -0.32
RIPK3-207ENST00000557662 LINC00483Q53H64 154 aa13.03□□□□□ -0.32
RIPK3-207ENST00000557662 SMCR5Q8TEV8 140 aa13.03□□□□□ -0.32
RIPK3-207ENST00000557662 LOC107984156A0A0G2JMH3 177 aa13.02□□□□□ -0.33
RIPK3-207ENST00000557662 NCR3O14931 201 aa13.02□□□□□ -0.33
RIPK3-207ENST00000557662 ARL17AQ8IVW1 177 aa13.02□□□□□ -0.33
RIPK3-207ENST00000557662 TRBV10-3A0A0K0K1G6 114 aa13.01□□□□□ -0.33
RIPK3-207ENST00000557662 MEIG1Q5JSS6 88 aa13.01□□□□□ -0.33
RIPK3-207ENST00000557662 NDUFA12Q9UI09 145 aa13.01□□□□□ -0.33
RIPK3-207ENST00000557662 TSPEAR-AS2P59090 65 aa13□□□□□ -0.33
RIPK3-207ENST00000557662 Q8NBF4 154 aa13□□□□□ -0.33
RIPK3-207ENST00000557662 KRTAP13-3Q3SY46 172 aa12.99□□□□□ -0.33
RIPK3-207ENST00000557662 FAM19A2Q8N3H0 131 aa12.99□□□□□ -0.33
RIPK3-207ENST00000557662 LINC00587B1AMM8 73 aa12.98□□□□□ -0.33
RIPK3-207ENST00000557662 NDUFA5Q16718 116 aa12.98□□□□□ -0.33
RIPK3-207ENST00000557662 DAND5Q8N907 189 aa12.98□□□□□ -0.33
RIPK3-207ENST00000557662 ATP6V1G1O75348 118 aa12.97□□□□□ -0.33
RIPK3-207ENST00000557662 LINC00310P59036 64 aa12.97□□□□□ -0.33
RIPK3-207ENST00000557662 MYMXA0A1B0GTQ4 84 aa12.96□□□□□ -0.33
RIPK3-207ENST00000557662 B5MCH6 92 aa12.96□□□□□ -0.33
RIPK3-207ENST00000557662 ETDCA0A1B0GVM5 59 aa12.95□□□□□ -0.34
RIPK3-207ENST00000557662 HSBP1O75506 76 aa12.95□□□□□ -0.34
RIPK3-207ENST00000557662 SPINK1P00995 79 aa12.94□□□□□ -0.34
RIPK3-207ENST00000557662 TRBV10-2A0A0K0K1G8 114 aa12.93□□□□□ -0.34
RIPK3-207ENST00000557662 ERC2-IT1O76042 136 aa12.93□□□□□ -0.34
RIPK3-207ENST00000557662 C4orf48Q5BLP8 95 aa12.93□□□□□ -0.34
RIPK3-207ENST00000557662 MAP1LC3CQ9BXW4 147 aa12.93□□□□□ -0.34
RIPK3-207ENST00000557662 LEPROTO15243 131 aa12.92□□□□□ -0.34
RIPK3-207ENST00000557662 Q9BRP9 147 aa12.92□□□□□ -0.34
RIPK3-207ENST00000557662 RPS29P62273 56 aaKnown RBP12.9□□□□□ -0.34
RIPK3-207ENST00000557662 ASB16-AS1Q495Z4 193 aa12.9□□□□□ -0.34
RIPK3-207ENST00000557662 LEPROTL1O95214 131 aa12.88□□□□□ -0.35
RIPK3-207ENST00000557662 DDTP30046 118 aa12.88□□□□□ -0.35
RIPK3-207ENST00000557662 Q6ZRX8 168 aa12.88□□□□□ -0.35
RIPK3-207ENST00000557662 J3QQQ9 107 aa12.87□□□□□ -0.35
RIPK3-207ENST00000557662 SERF1AO75920 110 aa12.87□□□□□ -0.35
RIPK3-207ENST00000557662 IGLV6-57P01721 117 aa12.87□□□□□ -0.35
RIPK3-207ENST00000557662 TRGC2P03986 189 aa12.87□□□□□ -0.35
RIPK3-207ENST00000557662 PLNP26678 52 aa12.87□□□□□ -0.35
RIPK3-207ENST00000557662 GAGE2AQ6NT46 116 aa12.87□□□□□ -0.35
RIPK3-207ENST00000557662 Q8N377 158 aa12.87□□□□□ -0.35
RIPK3-207ENST00000557662 H0Y8G0 127 aa12.86□□□□□ -0.35
RIPK3-207ENST00000557662 SSBP3-AS1Q7Z2R9 100 aa12.86□□□□□ -0.35
RIPK3-207ENST00000557662 SPANXB1Q9NS25 103 aaPredicted RBP12.86□□□□□ -0.35
RIPK3-207ENST00000557662 NDUFC2O95298 119 aa12.85□□□□□ -0.35
RIPK3-207ENST00000557662 MOBPQ13875 183 aa12.85□□□□□ -0.35
RIPK3-207ENST00000557662 KRTAP4-1Q9BYQ7 146 aa12.85□□□□□ -0.35
RIPK3-207ENST00000557662 NMUP48645 174 aa12.84□□□□□ -0.35
RIPK3-207ENST00000557662 S100A12P80511 92 aa12.84□□□□□ -0.35
RIPK3-207ENST00000557662 EIF4EBP3O60516 100 aaPredicted RBP12.82□□□□□ -0.36
RIPK3-207ENST00000557662 DPM2O94777 84 aa12.82□□□□□ -0.36
RIPK3-207ENST00000557662 SOSTDC1Q6X4U4 206 aa12.82□□□□□ -0.36
RIPK3-207ENST00000557662 IGLV9-49A0A0B4J1Y8 123 aa12.81□□□□□ -0.36
RIPK3-207ENST00000557662 PMCHL2Q9BQD1 86 aa12.79□□□□□ -0.36
RIPK3-207ENST00000557662 HSPB8Q9UJY1 196 aa12.79□□□□□ -0.36
RIPK3-207ENST00000557662 IGKCP01834 107 aa12.78□□□□□ -0.36
RIPK3-207ENST00000557662 HERVK_113P61574 105 aa12.78□□□□□ -0.36
RIPK3-207ENST00000557662 ADAMTSL4-AS1Q5T5F5 129 aa12.77□□□□□ -0.37
RIPK3-207ENST00000557662 TRAV23DV6A0A075B6W5 121 aa12.76□□□□□ -0.37
RIPK3-207ENST00000557662 LGALS3P17931 250 aaKnown RBP12.76□□□□□ -0.37
RIPK3-207ENST00000557662 MIEN1Q9BRT3 115 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms