RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 APOMO95445 188 aa7.9□□□□□ -1.14
TMEM260-215ENST00000557626 TSPAN13O95857 204 aa7.9□□□□□ -1.14
TMEM260-215ENST00000557626 COX7B2Q8TF08 81 aa7.9□□□□□ -1.14
TMEM260-215ENST00000557626 C2orf48Q96LS8 159 aa7.9□□□□□ -1.14
TMEM260-215ENST00000557626 C20orf202A1L168 122 aa7.89□□□□□ -1.15
TMEM260-215ENST00000557626 SCGB1D1O95968 90 aa7.89□□□□□ -1.15
TMEM260-215ENST00000557626 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
TMEM260-215ENST00000557626 ZNF625Q96I27 306 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-215ENST00000557626 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
TMEM260-215ENST00000557626 E9PLD3 99 aa7.88□□□□□ -1.15
TMEM260-215ENST00000557626 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
TMEM260-215ENST00000557626 ZNF561-AS1K7EIQ3 104 aa7.87□□□□□ -1.15
TMEM260-215ENST00000557626 LEPROTO15243 131 aa7.87□□□□□ -1.15
TMEM260-215ENST00000557626 SYCNQ0VAF6 134 aa7.87□□□□□ -1.15
TMEM260-215ENST00000557626 DIRC1Q969H9 104 aa7.87□□□□□ -1.15
TMEM260-215ENST00000557626 TTTY13Q9BZ97 58 aa7.87□□□□□ -1.15
TMEM260-215ENST00000557626 C9orf116Q5BN46 136 aaPredicted RBP7.86□□□□□ -1.15
TMEM260-215ENST00000557626 C6orf226Q5I0X4 101 aa7.86□□□□□ -1.15
TMEM260-215ENST00000557626 CAMK2N2Q96S95 79 aa7.86□□□□□ -1.15
TMEM260-215ENST00000557626 A0A096LNI7 61 aa7.85□□□□□ -1.15
TMEM260-215ENST00000557626 J3QQQ9 107 aa7.85□□□□□ -1.15
TMEM260-215ENST00000557626 RPL13AP40429 203 aaKnown RBP7.85□□□□□ -1.15
TMEM260-215ENST00000557626 AKR1D1P51857 326 aa7.85□□□□□ -1.15
TMEM260-215ENST00000557626 CARD19Q96LW7 228 aa7.85□□□□□ -1.15
TMEM260-215ENST00000557626 SSPOA2VEC9 5147 aa7.84□□□□□ -1.15
TMEM260-215ENST00000557626 F8WDY8 70 aa7.84□□□□□ -1.15
TMEM260-215ENST00000557626 NDUFA1O15239 70 aa7.84□□□□□ -1.15
TMEM260-215ENST00000557626 PRSS2P07478 247 aa7.84□□□□□ -1.15
TMEM260-215ENST00000557626 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
TMEM260-215ENST00000557626 PLEKHB2Q96CS7 222 aa7.84□□□□□ -1.15
TMEM260-215ENST00000557626 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
TMEM260-215ENST00000557626 HERVK_113P61574 105 aa7.83□□□□□ -1.16
TMEM260-215ENST00000557626 RNF151Q2KHN1 245 aa7.83□□□□□ -1.16
TMEM260-215ENST00000557626 PCP2Q8IVA1 136 aa7.83□□□□□ -1.16
TMEM260-215ENST00000557626 TP73-AS1Q9UF72 201 aa7.83□□□□□ -1.16
TMEM260-215ENST00000557626 NDUFA12Q9UI09 145 aa7.83□□□□□ -1.16
TMEM260-215ENST00000557626 SYNE2Q8WXH0 6885 aaKnown RBP7.82□□□□□ -1.16
TMEM260-215ENST00000557626 CXCL5P42830 114 aa7.82□□□□□ -1.16
TMEM260-215ENST00000557626 CKS1BP61024 79 aa7.82□□□□□ -1.16
TMEM260-215ENST00000557626 TRBV30A0A0K0K1B3 111 aa7.81□□□□□ -1.16
TMEM260-215ENST00000557626 H0Y9J4 135 aa7.81□□□□□ -1.16
TMEM260-215ENST00000557626 C1orf137Q5JT78 98 aa7.81□□□□□ -1.16
TMEM260-215ENST00000557626 KRTAP1-4P0C5Y4 121 aa7.79□□□□□ -1.16
TMEM260-215ENST00000557626 TLX1NBP0CAT3 122 aa7.79□□□□□ -1.16
TMEM260-215ENST00000557626 LGALS3P17931 250 aaKnown RBP7.79□□□□□ -1.16
TMEM260-215ENST00000557626 NMUP48645 174 aa7.79□□□□□ -1.16
TMEM260-215ENST00000557626 LITAFQ99732 161 aa7.79□□□□□ -1.16
TMEM260-215ENST00000557626 PAM16Q9Y3D7 125 aa7.79□□□□□ -1.16
TMEM260-215ENST00000557626 FCGBPQ9Y6R7 5405 aaPredicted RBP7.79□□□□□ -1.16
TMEM260-215ENST00000557626 A0A0J9YXY3 114 aa7.78□□□□□ -1.16
TMEM260-215ENST00000557626 MYMXA0A1B0GTQ4 84 aa7.78□□□□□ -1.16
TMEM260-215ENST00000557626 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
TMEM260-215ENST00000557626 KRTAP4-1Q9BYQ7 146 aa7.78□□□□□ -1.16
TMEM260-215ENST00000557626 ERG28Q9UKR5 140 aa7.78□□□□□ -1.16
TMEM260-215ENST00000557626 USH2AO75445 5202 aa7.77□□□□□ -1.17
TMEM260-215ENST00000557626 ZNF815PA8K554 130 aa7.77□□□□□ -1.17
TMEM260-215ENST00000557626 SMIM13P0DJ93 91 aa7.77□□□□□ -1.17
TMEM260-215ENST00000557626 KRTAP10-6P60371 365 aaPredicted RBP7.77□□□□□ -1.17
TMEM260-215ENST00000557626 SPATA45Q537H7 98 aa7.77□□□□□ -1.17
TMEM260-215ENST00000557626 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
TMEM260-215ENST00000557626 RETNLBQ9BQ08 111 aa7.77□□□□□ -1.17
TMEM260-215ENST00000557626 VAMP8Q9BV40 100 aa7.77□□□□□ -1.17
TMEM260-215ENST00000557626 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
TMEM260-215ENST00000557626 HSBP1L1C9JCN9 74 aa7.76□□□□□ -1.17
TMEM260-215ENST00000557626 NDUFC2-KCTD14E9PQ53 114 aa7.76□□□□□ -1.17
TMEM260-215ENST00000557626 EIF4EBP3O60516 100 aaPredicted RBP7.76□□□□□ -1.17
TMEM260-215ENST00000557626 PFN2P35080 140 aa7.76□□□□□ -1.17
TMEM260-215ENST00000557626 PTTG1IPP53801 180 aa7.76□□□□□ -1.17
TMEM260-215ENST00000557626 HERV-K104P63124 156 aa7.76□□□□□ -1.17
TMEM260-215ENST00000557626 MT1HP80294 61 aa7.76□□□□□ -1.17
TMEM260-215ENST00000557626 C9orf129Q5T035 196 aaKnown RBP7.76□□□□□ -1.17
TMEM260-215ENST00000557626 BOD1L2Q8IYS8 172 aa7.76□□□□□ -1.17
TMEM260-215ENST00000557626 A0A0U1RRA0 63 aa7.75□□□□□ -1.17
TMEM260-215ENST00000557626 IGLV7-43P04211 117 aa7.75□□□□□ -1.17
TMEM260-215ENST00000557626 SMIM6P0DI80 62 aa7.75□□□□□ -1.17
TMEM260-215ENST00000557626 COX8AP10176 69 aa7.75□□□□□ -1.17
TMEM260-215ENST00000557626 SFTA2Q6UW10 78 aa7.75□□□□□ -1.17
TMEM260-215ENST00000557626 Q8NDZ9 215 aa7.75□□□□□ -1.17
TMEM260-215ENST00000557626 C14orf144Q96I85 54 aa7.75□□□□□ -1.17
TMEM260-215ENST00000557626 GAGE2BQ13066 116 aa7.74□□□□□ -1.17
TMEM260-215ENST00000557626 GAGE2EQ4V326 116 aa7.74□□□□□ -1.17
TMEM260-215ENST00000557626 DAND5Q8N907 189 aa7.74□□□□□ -1.17
TMEM260-215ENST00000557626 XAGE1AQ9HD64 81 aa7.74□□□□□ -1.17
TMEM260-215ENST00000557626 GAGE2DQ9UEU5 116 aa7.74□□□□□ -1.17
TMEM260-215ENST00000557626 PKIGQ9Y2B9 76 aa7.74□□□□□ -1.17
TMEM260-215ENST00000557626 IGLV7-46A0A075B6I9 117 aa7.73□□□□□ -1.17
TMEM260-215ENST00000557626 A0A1W2PNN7 141 aa7.73□□□□□ -1.17
TMEM260-215ENST00000557626 FAM168BA1KXE4 195 aa7.73□□□□□ -1.17
TMEM260-215ENST00000557626 RPL18AQ02543 176 aaKnown RBP7.73□□□□□ -1.17
TMEM260-215ENST00000557626 COX17Q14061 63 aa7.73□□□□□ -1.17
TMEM260-215ENST00000557626 SOSTDC1Q6X4U4 206 aa7.73□□□□□ -1.17
TMEM260-215ENST00000557626 SND1-IT1Q9HBX3 110 aa7.73□□□□□ -1.17
TMEM260-215ENST00000557626 DLEU1O43261 78 aa7.72□□□□□ -1.17
TMEM260-215ENST00000557626 TIMM17BO60830 172 aa7.72□□□□□ -1.17
TMEM260-215ENST00000557626 LINC00158P58513 81 aa7.72□□□□□ -1.17
TMEM260-215ENST00000557626 ASB16-AS1Q495Z4 193 aa7.72□□□□□ -1.17
TMEM260-215ENST00000557626 C2orf91Q6ZV80 131 aa7.72□□□□□ -1.17
TMEM260-215ENST00000557626 MIR7-3HGQ8N6C7 128 aa7.72□□□□□ -1.17
TMEM260-215ENST00000557626 MACF1Q9UPN3 7388 aaKnown RBP7.72□□□□□ -1.17
TMEM260-215ENST00000557626 MEIG1Q5JSS6 88 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms