RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-225	ENST00000557559	LCE1D	Q5T752	114 aa		4.21	□□□□□ -1.74
PRKCH-225	ENST00000557559	LINC01561	Q8N1V8	128 aa		4.21	□□□□□ -1.74
PRKCH-225	ENST00000557559	NRAC	Q8N912	160 aa		4.21	□□□□□ -1.74
PRKCH-225	ENST00000557559	C20orf78	Q9BR46	151 aa		4.21	□□□□□ -1.74
PRKCH-225	ENST00000557559		A0A1B0GV72	72 aa		4.2	□□□□□ -1.74
PRKCH-225	ENST00000557559	SMKR1	H3BMG3	65 aa		4.2	□□□□□ -1.74
PRKCH-225	ENST00000557559		K7ERU9	68 aa		4.2	□□□□□ -1.74
PRKCH-225	ENST00000557559	IFI27	P40305	119 aa	Predicted RBP	4.2	□□□□□ -1.74
PRKCH-225	ENST00000557559	RIG	Q13278	110 aa		4.2	□□□□□ -1.74
PRKCH-225	ENST00000557559	SPAG11A	Q6PDA7	123 aa		4.2	□□□□□ -1.74
PRKCH-225	ENST00000557559	XAGE1A	Q9HD64	81 aa		4.2	□□□□□ -1.74
PRKCH-225	ENST00000557559	ANAPC11	Q9NYG5	84 aa		4.2	□□□□□ -1.74
PRKCH-225	ENST00000557559	TMEM250	H0YL14	139 aa		4.19	□□□□□ -1.74
PRKCH-225	ENST00000557559	CFC1B	P0CG36	223 aa		4.19	□□□□□ -1.74
PRKCH-225	ENST00000557559	C6orf226	Q5I0X4	101 aa		4.19	□□□□□ -1.74
PRKCH-225	ENST00000557559		Q8IZM0	81 aa		4.19	□□□□□ -1.74
PRKCH-225	ENST00000557559	MIEN1	Q9BRT3	115 aa		4.19	□□□□□ -1.74
PRKCH-225	ENST00000557559	KRTAP13-3	Q3SY46	172 aa		4.18	□□□□□ -1.74
PRKCH-225	ENST00000557559		Q6ZN92	141 aa		4.18	□□□□□ -1.74
PRKCH-225	ENST00000557559	TEX43	Q6ZNM6	134 aa		4.18	□□□□□ -1.74
PRKCH-225	ENST00000557559	KRTAP13-1	Q8IUC0	172 aa		4.18	□□□□□ -1.74
PRKCH-225	ENST00000557559	FAM104A	Q969W3	186 aa		4.18	□□□□□ -1.74
PRKCH-225	ENST00000557559	TMEM141	Q96I45	108 aa		4.18	□□□□□ -1.74
PRKCH-225	ENST00000557559	SMIM2	Q9BVW6	85 aa		4.18	□□□□□ -1.74
PRKCH-225	ENST00000557559	TOMM7	Q9P0U1	55 aa		4.18	□□□□□ -1.74
PRKCH-225	ENST00000557559	NAT8	Q9UHE5	227 aa		4.18	□□□□□ -1.74
PRKCH-225	ENST00000557559		F8VRH5	84 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	CXCL5	P42830	114 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	UBE2V1	Q13404	147 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	MRPL51	Q4U2R6	128 aa	Known RBP	4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	FAM104B	Q5XKR9	115 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	LINC01551	Q86U37	167 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	NKAPP1	Q8N9T2	125 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	LINC00167	Q96N53	147 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	VPS25	Q9BRG1	176 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	KRTAP9-3	Q9BYQ3	159 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	NDUFA12	Q9UI09	145 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559	PYGO1	Q9Y3Y4	419 aa		4.17	□□□□□ -1.74
PRKCH-225	ENST00000557559		A0A1B0GW15	77 aa		4.16	□□□□□ -1.74
PRKCH-225	ENST00000557559	RPL37AP8	A6NKH3	93 aa		4.16	□□□□□ -1.74
PRKCH-225	ENST00000557559	CKS2	P33552	79 aa		4.16	□□□□□ -1.74
PRKCH-225	ENST00000557559	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKCH-225	ENST00000557559	OSTC	Q9NRP0	149 aa		4.16	□□□□□ -1.74
PRKCH-225	ENST00000557559	NAT8B	Q9UHF3	227 aa		4.16	□□□□□ -1.74
PRKCH-225	ENST00000557559	IGLV5-37	A0A075B6J1	123 aa		4.15	□□□□□ -1.75
PRKCH-225	ENST00000557559	IGLV4-3	A0A075B6K6	122 aa		4.15	□□□□□ -1.75
PRKCH-225	ENST00000557559	RPL23	P62829	140 aa	Known RBP	4.15	□□□□□ -1.75
PRKCH-225	ENST00000557559	ADIRF	Q15847	76 aa		4.15	□□□□□ -1.75
PRKCH-225	ENST00000557559	BATF	Q16520	125 aa		4.15	□□□□□ -1.75
PRKCH-225	ENST00000557559	FAM19A2	Q8N3H0	131 aa		4.15	□□□□□ -1.75
PRKCH-225	ENST00000557559	SMIM7	Q9BQ49	75 aa		4.15	□□□□□ -1.75
PRKCH-225	ENST00000557559	KRTAP23-1	A1A580	65 aa		4.14	□□□□□ -1.75
PRKCH-225	ENST00000557559	HERVK_113	P63121	156 aa		4.14	□□□□□ -1.75
PRKCH-225	ENST00000557559	SEC11A	P67812	179 aa		4.14	□□□□□ -1.75
PRKCH-225	ENST00000557559	DAND5	Q8N907	189 aa		4.14	□□□□□ -1.75
PRKCH-225	ENST00000557559	VAMP8	Q9BV40	100 aa		4.14	□□□□□ -1.75
PRKCH-225	ENST00000557559	GNB1L	Q9BYB4	327 aa		4.14	□□□□□ -1.75
PRKCH-225	ENST00000557559	KRTAP4-1	Q9BYQ7	146 aa		4.14	□□□□□ -1.75
PRKCH-225	ENST00000557559	TRAPPC1	Q9Y5R8	145 aa		4.14	□□□□□ -1.75
PRKCH-225	ENST00000557559	IGKV2-28	A0A075B6P5	120 aa		4.13	□□□□□ -1.75
PRKCH-225	ENST00000557559		D6R8Y8	96 aa		4.13	□□□□□ -1.75
PRKCH-225	ENST00000557559	TRIAP1	O43715	76 aa		4.13	□□□□□ -1.75
PRKCH-225	ENST00000557559	IGKV2D-28	P01615	120 aa		4.13	□□□□□ -1.75
PRKCH-225	ENST00000557559	PRLH	P81277	87 aa		4.13	□□□□□ -1.75
PRKCH-225	ENST00000557559	FAM19A3	Q7Z5A8	133 aa		4.13	□□□□□ -1.75
PRKCH-225	ENST00000557559	FAM19A1	Q7Z5A9	133 aa		4.13	□□□□□ -1.75
PRKCH-225	ENST00000557559	C3orf22	Q8N5N4	141 aa		4.13	□□□□□ -1.75
PRKCH-225	ENST00000557559	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.13	□□□□□ -1.75
PRKCH-225	ENST00000557559		V9GYV3	84 aa		4.13	□□□□□ -1.75
PRKCH-225	ENST00000557559	SPINK1	P00995	79 aa		4.12	□□□□□ -1.75
PRKCH-225	ENST00000557559	NPY	P01303	97 aa		4.12	□□□□□ -1.75
PRKCH-225	ENST00000557559	OCIAD2	Q56VL3	154 aa		4.12	□□□□□ -1.75
PRKCH-225	ENST00000557559	PAPPA-AS1	Q5QFB9	102 aa		4.12	□□□□□ -1.75
PRKCH-225	ENST00000557559	TMEM126A	Q9H061	195 aa		4.12	□□□□□ -1.75
PRKCH-225	ENST00000557559	VCX2	Q9H322	139 aa		4.12	□□□□□ -1.75
PRKCH-225	ENST00000557559	UQCR10	Q9UDW1	63 aa		4.12	□□□□□ -1.75
PRKCH-225	ENST00000557559	CYSLTR1	Q9Y271	337 aa		4.12	□□□□□ -1.75
PRKCH-225	ENST00000557559	PAM16	Q9Y3D7	125 aa		4.12	□□□□□ -1.75
PRKCH-225	ENST00000557559	MT1H	P80294	61 aa		4.11	□□□□□ -1.75
PRKCH-225	ENST00000557559	ORMDL3	Q8N138	153 aa		4.11	□□□□□ -1.75
PRKCH-225	ENST00000557559	PLEKHB2	Q96CS7	222 aa		4.11	□□□□□ -1.75
PRKCH-225	ENST00000557559	AMELX	Q99217	191 aa		4.11	□□□□□ -1.75
PRKCH-225	ENST00000557559	KRTAP4-7	Q9BYR0	210 aa		4.11	□□□□□ -1.75
PRKCH-225	ENST00000557559	GEMIN7	Q9H840	131 aa	Known RBP	4.11	□□□□□ -1.75
PRKCH-225	ENST00000557559	LAMTOR2	Q9Y2Q5	125 aa		4.11	□□□□□ -1.75
PRKCH-225	ENST00000557559	TRAV9-1	A0A075B6T8	112 aa		4.1	□□□□□ -1.75
PRKCH-225	ENST00000557559	RPS29	P62273	56 aa	Known RBP	4.1	□□□□□ -1.75
PRKCH-225	ENST00000557559	SPATA45	Q537H7	98 aa		4.1	□□□□□ -1.75
PRKCH-225	ENST00000557559	C2orf66	Q6UXQ4	117 aa		4.1	□□□□□ -1.75
PRKCH-225	ENST00000557559	CST9L	Q9H4G1	147 aa		4.1	□□□□□ -1.75
PRKCH-225	ENST00000557559	CDKN2A-AS1	Q9UH64	79 aa		4.1	□□□□□ -1.75
PRKCH-225	ENST00000557559	SMIM27	A0A1W2PRY6	76 aa		4.09	□□□□□ -1.75
PRKCH-225	ENST00000557559		A4D1N5	150 aa		4.09	□□□□□ -1.75
PRKCH-225	ENST00000557559	SERF1A	O75920	110 aa		4.09	□□□□□ -1.75
PRKCH-225	ENST00000557559	IGLC3	P0DOY3	106 aa		4.09	□□□□□ -1.75
PRKCH-225	ENST00000557559	ORMDL2	Q53FV1	153 aa		4.09	□□□□□ -1.75
PRKCH-225	ENST00000557559	BAGE3	Q86Y29	109 aa		4.09	□□□□□ -1.75
PRKCH-225	ENST00000557559		Q8NBF4	154 aa		4.09	□□□□□ -1.75
PRKCH-225	ENST00000557559	COX7B2	Q8TF08	81 aa		4.09	□□□□□ -1.75
PRKCH-225	ENST00000557559	PRELID3A	Q96N28	172 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms