RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.4■□□□□ 0.06
SIX4-203ENST00000556952 EIF4EBP3O60516 100 aaPredicted RBP15.4■□□□□ 0.06
SIX4-203ENST00000556952 NHP2Q9NX24 153 aaKnown RBP15.38■□□□□ 0.05
SIX4-203ENST00000556952 BIRC6Q9NR09 4857 aa15.38■□□□□ 0.05
SIX4-203ENST00000556952 A0A1B0GVY2 172 aa15.37■□□□□ 0.05
SIX4-203ENST00000556952 A0A1B0GWB2 263 aa15.36■□□□□ 0.05
SIX4-203ENST00000556952 LBHQ53QV2 105 aaPredicted RBP15.36■□□□□ 0.05
SIX4-203ENST00000556952 COL5A1-AS1Q5SY13 56 aa15.36■□□□□ 0.05
SIX4-203ENST00000556952 Q6ZRP5 223 aa15.36■□□□□ 0.05
SIX4-203ENST00000556952 LOC107984640A0A0U1RRK4 108 aa15.35■□□□□ 0.05
SIX4-203ENST00000556952 RPL18AQ02543 176 aaKnown RBP15.34■□□□□ 0.05
SIX4-203ENST00000556952 PKIGQ9Y2B9 76 aa15.34■□□□□ 0.05
SIX4-203ENST00000556952 A0A0B4J2C4 111 aa15.33■□□□□ 0.05
SIX4-203ENST00000556952 DYNC1H1Q14204 4646 aaKnown RBP15.33■□□□□ 0.04
SIX4-203ENST00000556952 CFC1BP0CG36 223 aa15.32■□□□□ 0.04
SIX4-203ENST00000556952 CFC1P0CG37 223 aa15.32■□□□□ 0.04
SIX4-203ENST00000556952 NDUFC2O95298 119 aa15.32■□□□□ 0.04
SIX4-203ENST00000556952 C9orf163Q8N9P6 203 aa15.32■□□□□ 0.04
SIX4-203ENST00000556952 GAGE2EQ4V326 116 aa15.31■□□□□ 0.04
SIX4-203ENST00000556952 XAGE1AQ9HD64 81 aa15.31■□□□□ 0.04
SIX4-203ENST00000556952 GAGE2DQ9UEU5 116 aa15.31■□□□□ 0.04
SIX4-203ENST00000556952 K7ERJ3 54 aa15.3■□□□□ 0.04
SIX4-203ENST00000556952 RAB37Q96AX2 223 aa15.29■□□□□ 0.04
SIX4-203ENST00000556952 DNAH5Q8TE73 4624 aa15.29■□□□□ 0.04
SIX4-203ENST00000556952 PRO1854Q9UHT4 67 aa15.26■□□□□ 0.03
SIX4-203ENST00000556952 GAGE2BQ13066 116 aa15.25■□□□□ 0.03
SIX4-203ENST00000556952 C9orf129Q5T035 196 aaKnown RBP15.25■□□□□ 0.03
SIX4-203ENST00000556952 IGKV2-28A0A075B6P5 120 aa15.24■□□□□ 0.03
SIX4-203ENST00000556952 C16orf90A8MZG2 172 aa15.24■□□□□ 0.03
SIX4-203ENST00000556952 IGKV2D-28P01615 120 aa15.24■□□□□ 0.03
SIX4-203ENST00000556952 TRAV13-2A0A0B4J235 113 aa15.24■□□□□ 0.03
SIX4-203ENST00000556952 TAX1BP3O14907 124 aa15.23■□□□□ 0.03
SIX4-203ENST00000556952 Q8NDZ9 215 aa15.22■□□□□ 0.03
SIX4-203ENST00000556952 PLA2G2DQ9UNK4 145 aa15.22■□□□□ 0.03
SIX4-203ENST00000556952 A0A096LNI7 61 aa15.21■□□□□ 0.03
SIX4-203ENST00000556952 IGLV5-52A0A0A0MRZ9 124 aa15.2■□□□□ 0.02
SIX4-203ENST00000556952 LINC00337Q8N6G1 96 aa15.2■□□□□ 0.02
SIX4-203ENST00000556952 TRBV10-2A0A0K0K1G8 114 aa15.19■□□□□ 0.02
SIX4-203ENST00000556952 VPREB1P12018 145 aa15.19■□□□□ 0.02
SIX4-203ENST00000556952 SDIM1Q6ZPB5 146 aa15.19■□□□□ 0.02
SIX4-203ENST00000556952 RPL13AP40429 203 aaKnown RBP15.19■□□□□ 0.02
SIX4-203ENST00000556952 KRTAP10-2P60368 255 aa15.19■□□□□ 0.02
SIX4-203ENST00000556952 PGPEP1Q9NXJ5 209 aa15.19■□□□□ 0.02
SIX4-203ENST00000556952 LRP1BQ9NZR2 4599 aa15.18■□□□□ 0.02
SIX4-203ENST00000556952 NCR3O14931 201 aa15.17■□□□□ 0.02
SIX4-203ENST00000556952 FUSP35637 526 aaKnown RBP eCLIP15.17■□□□□ 0.02
SIX4-203ENST00000556952 LINC00474Q9P2X8 69 aa15.17■□□□□ 0.02
SIX4-203ENST00000556952 C9orf118A6NHY6 69 aa15.16■□□□□ 0.02
SIX4-203ENST00000556952 TSPAN13O95857 204 aa15.16■□□□□ 0.02
SIX4-203ENST00000556952 PRR3P79522 188 aaKnown RBP15.16■□□□□ 0.02
SIX4-203ENST00000556952 LINC01620Q4KN68 170 aa15.16■□□□□ 0.02
SIX4-203ENST00000556952 IGKV2-24A0A0C4DH68 120 aa15.15■□□□□ 0.02
SIX4-203ENST00000556952 IGLV5-37A0A075B6J1 123 aa15.14■□□□□ 0.01
SIX4-203ENST00000556952 Q1RN00 199 aa15.14■□□□□ 0.01
SIX4-203ENST00000556952 SERTAD4-AS1Q5TG53 156 aa15.13■□□□□ 0.01
SIX4-203ENST00000556952 NKAPP1Q8N9T2 125 aa15.13■□□□□ 0.01
SIX4-203ENST00000556952 OR13C6PQ8NH95 151 aa15.13■□□□□ 0.01
SIX4-203ENST00000556952 TMEM126AQ9H061 195 aa15.13■□□□□ 0.01
SIX4-203ENST00000556952 H7C2G1 150 aa15.12■□□□□ 0.01
SIX4-203ENST00000556952 M0R378 163 aa15.12■□□□□ 0.01
SIX4-203ENST00000556952 S100A7L2Q5SY68 101 aa15.11■□□□□ 0.01
SIX4-203ENST00000556952 FAM168BA1KXE4 195 aa15.11■□□□□ 0.01
SIX4-203ENST00000556952 H3BUT2 72 aa15.11■□□□□ 0.01
SIX4-203ENST00000556952 CHTF8P0CG12 524 aa15.1■□□□□ 0.01
SIX4-203ENST00000556952 KIAA1109Q2LD37 5005 aa15.08■□□□□ 0.01
SIX4-203ENST00000556952 IGLV6-57P01721 117 aa15.08■□□□□ 0
SIX4-203ENST00000556952 FAM19A5Q7Z5A7 132 aaPredicted RBP15.08■□□□□ 0
SIX4-203ENST00000556952 NAA38Q9BRA0 125 aaKnown RBP15.08■□□□□ 0
SIX4-203ENST00000556952 KRTAP7-1Q8IUC3 87 aa15.07■□□□□ 0
SIX4-203ENST00000556952 SPACA4Q8TDM5 124 aa15.07■□□□□ 0
SIX4-203ENST00000556952 A0A1W2PPM0 123 aa15.06■□□□□ 0
SIX4-203ENST00000556952 C22orf24Q9Y442 160 aa15.06■□□□□ 0
SIX4-203ENST00000556952 RPL28P46779 137 aaKnown RBP15.05■□□□□ -0
SIX4-203ENST00000556952 PSMB2P49721 201 aa15.05■□□□□ -0
SIX4-203ENST00000556952 CBY1Q9Y3M2 126 aa15.05■□□□□ -0
SIX4-203ENST00000556952 APOBP04114 4563 aaKnown RBP15.05■□□□□ -0
SIX4-203ENST00000556952 TRBV10-3A0A0K0K1G6 114 aa15.04■□□□□ -0
SIX4-203ENST00000556952 A0A1W2PNN7 141 aa15.04■□□□□ -0
SIX4-203ENST00000556952 SMIM11BQ8TCY0 68 aa15.04■□□□□ -0
SIX4-203ENST00000556952 LYRM7Q5U5X0 104 aa15.03■□□□□ -0
SIX4-203ENST00000556952 MRPL55Q7Z7F7 128 aaKnown RBP15.03■□□□□ -0
SIX4-203ENST00000556952 C7orf33Q8WU49 177 aa15.03■□□□□ -0
SIX4-203ENST00000556952 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.03■□□□□ -0
SIX4-203ENST00000556952 PANO1I0J062 215 aa15.02■□□□□ -0
SIX4-203ENST00000556952 M0QXV9 152 aa15.02■□□□□ -0
SIX4-203ENST00000556952 TRIAP1O43715 76 aa15.02■□□□□ -0
SIX4-203ENST00000556952 FABP2P12104 132 aa15.02□□□□□ -0.01
SIX4-203ENST00000556952 COX6CP09669 75 aa15.01□□□□□ -0.01
SIX4-203ENST00000556952 RYR1P21817 5038 aa15□□□□□ -0.01
SIX4-203ENST00000556952 TRAV23DV6A0A075B6W5 121 aa14.99□□□□□ -0.01
SIX4-203ENST00000556952 A0A1B0GV90 55 aa14.99□□□□□ -0.01
SIX4-203ENST00000556952 DPH3Q96FX2 82 aa14.99□□□□□ -0.01
SIX4-203ENST00000556952 GAGE10A6NGK3 116 aa14.98□□□□□ -0.01
SIX4-203ENST00000556952 EPM2AB3EWF7 344 aa14.98□□□□□ -0.01
SIX4-203ENST00000556952 LINC00167Q96N53 147 aa14.98□□□□□ -0.01
SIX4-203ENST00000556952 DNAH8Q96JB1 4490 aa14.98□□□□□ -0.01
SIX4-203ENST00000556952 SCGB1C2P0DMR2 95 aa14.97□□□□□ -0.01
SIX4-203ENST00000556952 HERC2O95714 4834 aa14.96□□□□□ -0.01
SIX4-203ENST00000556952 IGLV1-50A0A075B6I6 118 aa14.96□□□□□ -0.01
SIX4-203ENST00000556952 A0A087WYN8 130 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms