RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 APOC3P02656 99 aa4.28□□□□□ -1.72
PCNX1-213ENST00000556846 IGLC3P0DOY3 106 aa4.28□□□□□ -1.72
PCNX1-213ENST00000556846 CRYGAP11844 174 aa4.28□□□□□ -1.72
PCNX1-213ENST00000556846 PMCHL1Q16048 86 aa4.28□□□□□ -1.72
PCNX1-213ENST00000556846 NDUFA5Q16718 116 aa4.28□□□□□ -1.72
PCNX1-213ENST00000556846 C10orf91Q5T1B1 145 aa4.28□□□□□ -1.72
PCNX1-213ENST00000556846 TMEM170BQ5T4T1 132 aa4.28□□□□□ -1.72
PCNX1-213ENST00000556846 BAGE3Q86Y29 109 aa4.28□□□□□ -1.72
PCNX1-213ENST00000556846 ZNF625Q96I27 306 aaPredicted RBP4.28□□□□□ -1.72
PCNX1-213ENST00000556846 PKHD1L1Q86WI1 4243 aa4.28□□□□□ -1.72
PCNX1-213ENST00000556846 IGKV2-28A0A075B6P5 120 aa4.27□□□□□ -1.73
PCNX1-213ENST00000556846 IGKV2D-28P01615 120 aa4.27□□□□□ -1.73
PCNX1-213ENST00000556846 ZNF22P17026 224 aaPredicted RBP4.27□□□□□ -1.73
PCNX1-213ENST00000556846 RPL24P83731 157 aaKnown RBP4.27□□□□□ -1.73
PCNX1-213ENST00000556846 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
PCNX1-213ENST00000556846 TYMSOSQ8TAI1 123 aa4.27□□□□□ -1.73
PCNX1-213ENST00000556846 C18orf32Q8TCD1 76 aa4.27□□□□□ -1.73
PCNX1-213ENST00000556846 ERG28Q9UKR5 140 aa4.27□□□□□ -1.73
PCNX1-213ENST00000556846 IGLV5-37A0A075B6J1 123 aa4.26□□□□□ -1.73
PCNX1-213ENST00000556846 ATP6V1G1O75348 118 aa4.26□□□□□ -1.73
PCNX1-213ENST00000556846 SCO1O75880 301 aa4.26□□□□□ -1.73
PCNX1-213ENST00000556846 SNAPINO95295 136 aa4.26□□□□□ -1.73
PCNX1-213ENST00000556846 COX17Q14061 63 aa4.26□□□□□ -1.73
PCNX1-213ENST00000556846 SND1-IT1Q9HBX3 110 aa4.26□□□□□ -1.73
PCNX1-213ENST00000556846 ANAPC11Q9NYG5 84 aa4.26□□□□□ -1.73
PCNX1-213ENST00000556846 CHTOPQ9Y3Y2 248 aaKnown RBP4.26□□□□□ -1.73
PCNX1-213ENST00000556846 A0A096LNJ9 63 aa4.25□□□□□ -1.73
PCNX1-213ENST00000556846 IGLV5-39A0A0G2JS06 123 aa4.25□□□□□ -1.73
PCNX1-213ENST00000556846 A0A0U1RRA0 63 aa4.25□□□□□ -1.73
PCNX1-213ENST00000556846 LINC00158P58513 81 aa4.25□□□□□ -1.73
PCNX1-213ENST00000556846 PRLHP81277 87 aa4.25□□□□□ -1.73
PCNX1-213ENST00000556846 SFTA2Q6UW10 78 aa4.25□□□□□ -1.73
PCNX1-213ENST00000556846 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
PCNX1-213ENST00000556846 SVBPQ8N300 66 aa4.25□□□□□ -1.73
PCNX1-213ENST00000556846 URB1-AS1Q96HZ7 61 aa4.25□□□□□ -1.73
PCNX1-213ENST00000556846 A0A087X002 238 aa4.24□□□□□ -1.73
PCNX1-213ENST00000556846 IGKV2D-26A0A0A0MRZ7 120 aa4.24□□□□□ -1.73
PCNX1-213ENST00000556846 C9orf118A6NHY6 69 aa4.24□□□□□ -1.73
PCNX1-213ENST00000556846 C11orf86A6NJI1 115 aa4.24□□□□□ -1.73
PCNX1-213ENST00000556846 TMEM238C9JI98 176 aa4.23□□□□□ -1.73
PCNX1-213ENST00000556846 VPREB1P12018 145 aa4.23□□□□□ -1.73
PCNX1-213ENST00000556846 CHCHD1Q96BP2 118 aaKnown RBP4.23□□□□□ -1.73
PCNX1-213ENST00000556846 TMEM126AQ9H061 195 aa4.23□□□□□ -1.73
PCNX1-213ENST00000556846 MEIG1Q5JSS6 88 aa4.22□□□□□ -1.73
PCNX1-213ENST00000556846 CBLN2Q8IUK8 224 aa4.22□□□□□ -1.73
PCNX1-213ENST00000556846 IFI27L1Q96BM0 104 aa4.22□□□□□ -1.73
PCNX1-213ENST00000556846 TRAV12-1A0A0B4J245 112 aa4.21□□□□□ -1.74
PCNX1-213ENST00000556846 TMEM223A0PJW6 202 aa4.21□□□□□ -1.74
PCNX1-213ENST00000556846 H0Y8G0 127 aa4.21□□□□□ -1.74
PCNX1-213ENST00000556846 M0R378 163 aa4.21□□□□□ -1.74
PCNX1-213ENST00000556846 HSBP1O75506 76 aa4.21□□□□□ -1.74
PCNX1-213ENST00000556846 FAM229BQ4G0N7 80 aa4.21□□□□□ -1.74
PCNX1-213ENST00000556846 KRTAP13-1Q8IUC0 172 aa4.21□□□□□ -1.74
PCNX1-213ENST00000556846 LINC00304Q8N9R0 145 aa4.21□□□□□ -1.74
PCNX1-213ENST00000556846 HIGD2AQ9BW72 106 aa4.21□□□□□ -1.74
PCNX1-213ENST00000556846 TNXBP22105 4242 aa4.21□□□□□ -1.74
PCNX1-213ENST00000556846 LINC00587B1AMM8 73 aa4.2□□□□□ -1.74
PCNX1-213ENST00000556846 SMIM13P0DJ93 91 aa4.2□□□□□ -1.74
PCNX1-213ENST00000556846 KRTAP13-2Q52LG2 175 aa4.2□□□□□ -1.74
PCNX1-213ENST00000556846 BOD1L2Q8IYS8 172 aa4.2□□□□□ -1.74
PCNX1-213ENST00000556846 FAM19A2Q8N3H0 131 aa4.2□□□□□ -1.74
PCNX1-213ENST00000556846 HERV-K104P63124 156 aa4.19□□□□□ -1.74
PCNX1-213ENST00000556846 S100A12P80511 92 aa4.19□□□□□ -1.74
PCNX1-213ENST00000556846 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
PCNX1-213ENST00000556846 MIR7-3HGQ8N6C7 128 aa4.19□□□□□ -1.74
PCNX1-213ENST00000556846 Q8NDZ9 215 aa4.19□□□□□ -1.74
PCNX1-213ENST00000556846 PLEKHB2Q96CS7 222 aa4.19□□□□□ -1.74
PCNX1-213ENST00000556846 RETNLBQ9BQ08 111 aa4.19□□□□□ -1.74
PCNX1-213ENST00000556846 MAP1LC3CQ9BXW4 147 aa4.19□□□□□ -1.74
PCNX1-213ENST00000556846 MYMXA0A1B0GTQ4 84 aa4.18□□□□□ -1.74
PCNX1-213ENST00000556846 NCR3O14931 201 aa4.18□□□□□ -1.74
PCNX1-213ENST00000556846 LEPROTL1O95214 131 aa4.18□□□□□ -1.74
PCNX1-213ENST00000556846 NDUFA12Q9UI09 145 aa4.18□□□□□ -1.74
PCNX1-213ENST00000556846 ZNF706Q9Y5V0 76 aaPredicted RBP4.18□□□□□ -1.74
PCNX1-213ENST00000556846 LRP2P98164 4655 aa4.18□□□□□ -1.74
PCNX1-213ENST00000556846 IGLV7-46A0A075B6I9 117 aa4.17□□□□□ -1.74
PCNX1-213ENST00000556846 A0A0U1RQV1 116 aa4.17□□□□□ -1.74
PCNX1-213ENST00000556846 ETDCA0A1B0GVM5 59 aa4.17□□□□□ -1.74
PCNX1-213ENST00000556846 TRGC2P03986 189 aa4.17□□□□□ -1.74
PCNX1-213ENST00000556846 ANKRD39Q53RE8 183 aa4.17□□□□□ -1.74
PCNX1-213ENST00000556846 YPEL4Q96NS1 127 aa4.17□□□□□ -1.74
PCNX1-213ENST00000556846 CDIP1Q9H305 208 aa4.17□□□□□ -1.74
PCNX1-213ENST00000556846 RNF213Q63HN8 5207 aa4.16□□□□□ -1.74
PCNX1-213ENST00000556846 PRYO14603 147 aa4.16□□□□□ -1.74
PCNX1-213ENST00000556846 LEPROTO15243 131 aa4.16□□□□□ -1.74
PCNX1-213ENST00000556846 FABP4P15090 132 aa4.16□□□□□ -1.74
PCNX1-213ENST00000556846 HERVK_113P61574 105 aa4.16□□□□□ -1.74
PCNX1-213ENST00000556846 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
PCNX1-213ENST00000556846 C3orf22Q8N5N4 141 aa4.16□□□□□ -1.74
PCNX1-213ENST00000556846 SMCR5Q8TEV8 140 aa4.16□□□□□ -1.74
PCNX1-213ENST00000556846 SPRR4Q96PI1 79 aa4.16□□□□□ -1.74
PCNX1-213ENST00000556846 HSPB8Q9UJY1 196 aa4.16□□□□□ -1.74
PCNX1-213ENST00000556846 TRBV10-3A0A0K0K1G6 114 aa4.15□□□□□ -1.75
PCNX1-213ENST00000556846 SERF1AO75920 110 aa4.15□□□□□ -1.75
PCNX1-213ENST00000556846 LGALS3P17931 250 aaKnown RBP4.15□□□□□ -1.75
PCNX1-213ENST00000556846 PLNP26678 52 aa4.15□□□□□ -1.75
PCNX1-213ENST00000556846 KRTAP10-7P60409 375 aaPredicted RBP4.15□□□□□ -1.75
PCNX1-213ENST00000556846 DAND5Q8N907 189 aa4.15□□□□□ -1.75
PCNX1-213ENST00000556846 MIEN1Q9BRT3 115 aa4.15□□□□□ -1.75
PCNX1-213ENST00000556846 PPDPFQ9H3Y8 114 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms