RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 ACYP1P07311 99 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 RPL39P62891 51 aaKnown RBP2.7□□□□□ -1.98
ATXN3-240ENST00000556339 HERVK_113P63121 156 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 MIAQ16674 131 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 FAM74A4Q5TZK3 123 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 SFTA2Q6UW10 78 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 Q6ZUT4 128 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 MUSTN1Q8IVN3 82 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 ANKRD29Q8N6D5 301 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 VSIG2Q96IQ7 327 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 CARD19Q96LW7 228 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 Q9H8V8 135 aa2.7□□□□□ -1.98
ATXN3-240ENST00000556339 ABCA13Q86UQ4 5058 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 DNAH17Q9UFH2 4485 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 TRAV26-1A0A087WT03 109 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 TRAV4A0A0B4J268 109 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 A0A0J9YXV3 536 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 NDUFA1O15239 70 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 RS1O15537 224 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 SPINK8P0C7L1 97 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 IGHV3-30-3P0DP02 117 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 TSPEAR-AS2P59090 65 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 CKS1BP61024 79 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 HERV-K104P63124 156 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 GAGE5Q13069 117 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 GAGE6Q13070 117 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 DAZ2Q13117 558 aaKnown RBP2.69□□□□□ -1.98
ATXN3-240ENST00000556339 LINC01620Q4KN68 170 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 Q6ZR54 194 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 DAZ4Q86SG3 579 aaKnown RBP2.69□□□□□ -1.98
ATXN3-240ENST00000556339 OPRPNQ99935 248 aaPredicted RBP2.69□□□□□ -1.98
ATXN3-240ENST00000556339 GEMIN7Q9H840 131 aaKnown RBP2.69□□□□□ -1.98
ATXN3-240ENST00000556339 JPT2Q9H910 190 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 DAZ3Q9NR90 486 aaKnown RBP2.69□□□□□ -1.98
ATXN3-240ENST00000556339 NDUFA12Q9UI09 145 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 UBE2D4Q9Y2X8 147 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 LINC00588Q9Y4M8 146 aa2.69□□□□□ -1.98
ATXN3-240ENST00000556339 TRGV1A0A0A0MS02 117 aa2.68□□□□□ -1.98
ATXN3-240ENST00000556339 C9JAW5 83 aa2.68□□□□□ -1.98
ATXN3-240ENST00000556339 LST1O00453 97 aa2.68□□□□□ -1.98
ATXN3-240ENST00000556339 Q1RN00 199 aa2.68□□□□□ -1.98
ATXN3-240ENST00000556339 TTC32Q5I0X7 151 aa2.68□□□□□ -1.98
ATXN3-240ENST00000556339 SERTAD4-AS1Q5TG53 156 aa2.68□□□□□ -1.98
ATXN3-240ENST00000556339 CHCHD7Q9BUK0 85 aa2.68□□□□□ -1.98
ATXN3-240ENST00000556339 IMUPQ9GZP8 106 aa2.68□□□□□ -1.98
ATXN3-240ENST00000556339 ICOSQ9Y6W8 199 aa2.68□□□□□ -1.98
ATXN3-240ENST00000556339 A0A096LPF7 62 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 TRAV8-4A0A0B4J246 113 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 TRGV4A0A0C4DH28 118 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 PLAC8L1A1L4L8 177 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 SNCGO76070 127 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 TRACP01848 142 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 GAGE2BQ13066 116 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 ESRGQ1W209 222 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 GAGE2EQ4V326 116 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 C2orf82Q6UX34 121 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 Q6ZTI0 123 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 NOTCH2NLQ7Z3S9 236 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 C11orf72Q8NBR9 251 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 UBE2WQ96B02 151 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 GAGE2DQ9UEU5 116 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 PKHD1P08F94 4074 aa2.67□□□□□ -1.98
ATXN3-240ENST00000556339 TRAV13-2A0A0B4J235 113 aa2.66□□□□□ -1.98
ATXN3-240ENST00000556339 H3BNG1 76 aa2.66□□□□□ -1.98
ATXN3-240ENST00000556339 COX7A2LO14548 114 aa2.66□□□□□ -1.98
ATXN3-240ENST00000556339 CDK2AP2O75956 126 aa2.66□□□□□ -1.98
ATXN3-240ENST00000556339 XGP55808 180 aa2.66□□□□□ -1.98
ATXN3-240ENST00000556339 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
ATXN3-240ENST00000556339 LINC01561Q8N1V8 128 aa2.66□□□□□ -1.98
ATXN3-240ENST00000556339 FAM104AQ969W3 186 aa2.66□□□□□ -1.98
ATXN3-240ENST00000556339 DNAH2Q9P225 4427 aa2.66□□□□□ -1.98
ATXN3-240ENST00000556339 DYNC1H1Q14204 4646 aaKnown RBP2.65□□□□□ -1.98
ATXN3-240ENST00000556339 SRRM2Q9UQ35 2752 aaKnown RBP2.65□□□□□ -1.99
ATXN3-240ENST00000556339 TRBV7-7A0A0K0K1E9 115 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 TRBV6-4A0A1B0GX49 114 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 KRTAP16-1A8MUX0 517 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 H0YGX0 51 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 K7EQD1 137 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 PSCAO43653 123 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 MT-ATP8P03928 68 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 INAFM2P0DMQ5 153 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 KRTAP13-3Q3SY46 172 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 DAND5Q8N907 189 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 LINC00308Q8TCZ7 52 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 TMEM101Q96IK0 257 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 ANAPC13Q9BS18 74 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 PRO0255Q9UI72 69 aa2.65□□□□□ -1.99
ATXN3-240ENST00000556339 TRAV8-3A0A0A6YYJ7 113 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 A0A1B0GX51 115 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 EPM2AB3EWF7 344 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 CXCL5P42830 114 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 RPL28P46779 137 aaKnown RBP2.64□□□□□ -1.99
ATXN3-240ENST00000556339 NDUFV3P56181 108 aaKnown RBP2.64□□□□□ -1.99
ATXN3-240ENST00000556339 MEIG1Q5JSS6 88 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 ADAMTSL4-AS1Q5T5F5 129 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 LINC00242Q5T6M2 205 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 LYPD5Q6UWN5 251 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 SDIM1Q6ZPB5 146 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 LINC00643Q86TS7 51 aa2.64□□□□□ -1.99
ATXN3-240ENST00000556339 LINC00612Q8N6U2 182 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms