RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 TMEM126AQ9H061 195 aa7.44□□□□□ -1.22
HNRNPC-221ENST00000555883 KRTAP13-2Q52LG2 175 aa7.43□□□□□ -1.22
HNRNPC-221ENST00000555883 BAGE3Q86Y29 109 aa7.43□□□□□ -1.22
HNRNPC-221ENST00000555883 KRTAP9-2Q9BYQ4 174 aa7.43□□□□□ -1.22
HNRNPC-221ENST00000555883 TSPAN13O95857 204 aa7.42□□□□□ -1.22
HNRNPC-221ENST00000555883 PMCHL1Q16048 86 aa7.42□□□□□ -1.22
HNRNPC-221ENST00000555883 TMEM170BQ5T4T1 132 aa7.42□□□□□ -1.22
HNRNPC-221ENST00000555883 TRAV12-1A0A0B4J245 112 aa7.41□□□□□ -1.22
HNRNPC-221ENST00000555883 M0R378 163 aa7.41□□□□□ -1.22
HNRNPC-221ENST00000555883 SCO1O75880 301 aa7.41□□□□□ -1.22
HNRNPC-221ENST00000555883 SNAPINO95295 136 aa7.41□□□□□ -1.22
HNRNPC-221ENST00000555883 SVBPQ8N300 66 aa7.41□□□□□ -1.22
HNRNPC-221ENST00000555883 CHCHD1Q96BP2 118 aaKnown RBP7.41□□□□□ -1.22
HNRNPC-221ENST00000555883 ANAPC11Q9NYG5 84 aa7.41□□□□□ -1.22
HNRNPC-221ENST00000555883 KRTAP9-6A0A140TA67 174 aa7.4□□□□□ -1.22
HNRNPC-221ENST00000555883 PRLHP81277 87 aa7.4□□□□□ -1.22
HNRNPC-221ENST00000555883 NDUFA5Q16718 116 aa7.4□□□□□ -1.22
HNRNPC-221ENST00000555883 FAM19A1Q7Z5A9 133 aa7.4□□□□□ -1.22
HNRNPC-221ENST00000555883 LINC00304Q8N9R0 145 aa7.4□□□□□ -1.22
HNRNPC-221ENST00000555883 CHTOPQ9Y3Y2 248 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-221ENST00000555883 IGKV2D-26A0A0A0MRZ7 120 aa7.39□□□□□ -1.23
HNRNPC-221ENST00000555883 TMEM223A0PJW6 202 aa7.39□□□□□ -1.23
HNRNPC-221ENST00000555883 TMEM238C9JI98 176 aa7.39□□□□□ -1.23
HNRNPC-221ENST00000555883 APOC3P02656 99 aa7.39□□□□□ -1.23
HNRNPC-221ENST00000555883 Q8NDZ9 215 aa7.39□□□□□ -1.23
HNRNPC-221ENST00000555883 PLEKHB2Q96CS7 222 aa7.39□□□□□ -1.23
HNRNPC-221ENST00000555883 A0A0U1RQV1 116 aa7.38□□□□□ -1.23
HNRNPC-221ENST00000555883 YPEL4Q96NS1 127 aa7.38□□□□□ -1.23
HNRNPC-221ENST00000555883 LINC00158P58513 81 aa7.37□□□□□ -1.23
HNRNPC-221ENST00000555883 CBLN2Q8IUK8 224 aa7.37□□□□□ -1.23
HNRNPC-221ENST00000555883 IFI27L1Q96BM0 104 aa7.37□□□□□ -1.23
HNRNPC-221ENST00000555883 LINC00587B1AMM8 73 aa7.36□□□□□ -1.23
HNRNPC-221ENST00000555883 HERV-K104P63124 156 aa7.36□□□□□ -1.23
HNRNPC-221ENST00000555883 TPRXLQ17RH7 258 aa7.36□□□□□ -1.23
HNRNPC-221ENST00000555883 PRYO14603 147 aa7.34□□□□□ -1.23
HNRNPC-221ENST00000555883 ZNF706Q9Y5V0 76 aaPredicted RBP7.34□□□□□ -1.23
HNRNPC-221ENST00000555883 SPRR1AP35321 89 aa7.33□□□□□ -1.24
HNRNPC-221ENST00000555883 SPAG11AQ6PDA7 123 aa7.33□□□□□ -1.24
HNRNPC-221ENST00000555883 LINC00337Q8N6G1 96 aa7.33□□□□□ -1.24
HNRNPC-221ENST00000555883 SPRR4Q96PI1 79 aa7.33□□□□□ -1.24
HNRNPC-221ENST00000555883 HIGD2AQ9BW72 106 aa7.33□□□□□ -1.24
HNRNPC-221ENST00000555883 KCNQ1DNQ9H478 68 aa7.33□□□□□ -1.24
HNRNPC-221ENST00000555883 ATP6V1G1O75348 118 aa7.32□□□□□ -1.24
HNRNPC-221ENST00000555883 SMIM13P0DJ93 91 aa7.32□□□□□ -1.24
HNRNPC-221ENST00000555883 HSBP1O75506 76 aa7.31□□□□□ -1.24
HNRNPC-221ENST00000555883 MEIG1Q5JSS6 88 aa7.31□□□□□ -1.24
HNRNPC-221ENST00000555883 BOD1L2Q8IYS8 172 aa7.31□□□□□ -1.24
HNRNPC-221ENST00000555883 MIR7-3HGQ8N6C7 128 aa7.31□□□□□ -1.24
HNRNPC-221ENST00000555883 MAP1LC3CQ9BXW4 147 aa7.31□□□□□ -1.24
HNRNPC-221ENST00000555883 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
HNRNPC-221ENST00000555883 A0A0U1RRA0 63 aa7.3□□□□□ -1.24
HNRNPC-221ENST00000555883 MYMXA0A1B0GTQ4 84 aa7.3□□□□□ -1.24
HNRNPC-221ENST00000555883 KRTAP4-16G5E9R7 235 aaPredicted RBP7.3□□□□□ -1.24
HNRNPC-221ENST00000555883 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
HNRNPC-221ENST00000555883 C3orf22Q8N5N4 141 aa7.3□□□□□ -1.24
HNRNPC-221ENST00000555883 RETNLBQ9BQ08 111 aa7.3□□□□□ -1.24
HNRNPC-221ENST00000555883 NDUFA12Q9UI09 145 aa7.3□□□□□ -1.24
HNRNPC-221ENST00000555883 IGLV7-46A0A075B6I9 117 aa7.29□□□□□ -1.24
HNRNPC-221ENST00000555883 PLNP26678 52 aa7.28□□□□□ -1.24
HNRNPC-221ENST00000555883 S100A12P80511 92 aa7.28□□□□□ -1.24
HNRNPC-221ENST00000555883 FP248Q71RG6 208 aaPredicted RBP7.28□□□□□ -1.24
HNRNPC-221ENST00000555883 FAM19A2Q8N3H0 131 aa7.28□□□□□ -1.24
HNRNPC-221ENST00000555883 CDIP1Q9H305 208 aa7.28□□□□□ -1.24
HNRNPC-221ENST00000555883 TRBV10-2A0A0K0K1G8 114 aa7.27□□□□□ -1.25
HNRNPC-221ENST00000555883 NCR3O14931 201 aa7.27□□□□□ -1.25
HNRNPC-221ENST00000555883 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
HNRNPC-221ENST00000555883 TRBV10-3A0A0K0K1G6 114 aa7.26□□□□□ -1.25
HNRNPC-221ENST00000555883 ETDCA0A1B0GVM5 59 aa7.26□□□□□ -1.25
HNRNPC-221ENST00000555883 LEPROTO15243 131 aa7.26□□□□□ -1.25
HNRNPC-221ENST00000555883 LEPROTL1O95214 131 aa7.26□□□□□ -1.25
HNRNPC-221ENST00000555883 NMUP48645 174 aa7.25□□□□□ -1.25
HNRNPC-221ENST00000555883 SMCR5Q8TEV8 140 aa7.25□□□□□ -1.25
HNRNPC-221ENST00000555883 PPDPFQ9H3Y8 114 aa7.25□□□□□ -1.25
HNRNPC-221ENST00000555883 SPINK1P00995 79 aa7.24□□□□□ -1.25
HNRNPC-221ENST00000555883 TRGC2P03986 189 aa7.24□□□□□ -1.25
HNRNPC-221ENST00000555883 LINC00310P59036 64 aa7.24□□□□□ -1.25
HNRNPC-221ENST00000555883 TSPEAR-AS2P59090 65 aa7.24□□□□□ -1.25
HNRNPC-221ENST00000555883 HSPB8Q9UJY1 196 aa7.24□□□□□ -1.25
HNRNPC-221ENST00000555883 MUC17Q685J3 4493 aa7.24□□□□□ -1.25
HNRNPC-221ENST00000555883 B5MCH6 92 aa7.23□□□□□ -1.25
HNRNPC-221ENST00000555883 H0Y8G0 127 aa7.23□□□□□ -1.25
HNRNPC-221ENST00000555883 J3QQQ9 107 aa7.23□□□□□ -1.25
HNRNPC-221ENST00000555883 SERF1AO75920 110 aa7.23□□□□□ -1.25
HNRNPC-221ENST00000555883 NDUFC2O95298 119 aa7.23□□□□□ -1.25
HNRNPC-221ENST00000555883 HERVK_113P61574 105 aa7.23□□□□□ -1.25
HNRNPC-221ENST00000555883 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
HNRNPC-221ENST00000555883 Q8NBF4 154 aa7.23□□□□□ -1.25
HNRNPC-221ENST00000555883 SPANXB1Q9NS25 103 aaPredicted RBP7.23□□□□□ -1.25
HNRNPC-221ENST00000555883 FAT4Q6V0I7 4981 aa7.23□□□□□ -1.25
HNRNPC-221ENST00000555883 DPM2O94777 84 aa7.22□□□□□ -1.25
HNRNPC-221ENST00000555883 DDTP30046 118 aa7.22□□□□□ -1.25
HNRNPC-221ENST00000555883 Q6ZRX8 168 aa7.21□□□□□ -1.26
HNRNPC-221ENST00000555883 MIEN1Q9BRT3 115 aa7.21□□□□□ -1.26
HNRNPC-221ENST00000555883 IGLV6-57P01721 117 aa7.2□□□□□ -1.26
HNRNPC-221ENST00000555883 IGKCP01834 107 aa7.2□□□□□ -1.26
HNRNPC-221ENST00000555883 SSBP3-AS1Q7Z2R9 100 aa7.2□□□□□ -1.26
HNRNPC-221ENST00000555883 DAND5Q8N907 189 aa7.2□□□□□ -1.26
HNRNPC-221ENST00000555883 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
HNRNPC-221ENST00000555883 KRTAP13-3Q3SY46 172 aa7.19□□□□□ -1.26
HNRNPC-221ENST00000555883 Q9BRP9 147 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms