RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CUX1P39880 1505 aa-0.79□□□□□ -2.54
SRP54-207ENST00000555535 MYOM2P54296 1465 aa-0.79□□□□□ -2.54
SRP54-207ENST00000555535 MYH4Q9Y623 1939 aa-0.79□□□□□ -2.54
SRP54-207ENST00000555535 C7orf77A4D0Y5 90 aa-0.79□□□□□ -2.54
SRP54-207ENST00000555535 WFDC13Q8IUB5 93 aa-0.79□□□□□ -2.54
SRP54-207ENST00000555535 SVBPQ8N300 66 aa-0.79□□□□□ -2.54
SRP54-207ENST00000555535 C4AP0C0L4 1744 aa-0.79□□□□□ -2.54
SRP54-207ENST00000555535 C4BP0C0L5 1744 aa-0.79□□□□□ -2.54
SRP54-207ENST00000555535 PKD1L3Q7Z443 1732 aa-0.79□□□□□ -2.54
SRP54-207ENST00000555535 FAT3Q8TDW7 4589 aa-0.79□□□□□ -2.54
SRP54-207ENST00000555535 LAMA2P24043 3122 aaKnown RBP-0.8□□□□□ -2.54
SRP54-207ENST00000555535 ROCK2O75116 1388 aaKnown RBP-0.8□□□□□ -2.54
SRP54-207ENST00000555535 H3BNG1 76 aa-0.8□□□□□ -2.54
SRP54-207ENST00000555535 H3BQF6 201 aa-0.8□□□□□ -2.54
SRP54-207ENST00000555535 SPRR2FQ96RM1 72 aa-0.8□□□□□ -2.54
SRP54-207ENST00000555535 PTPN23Q9H3S7 1636 aa-0.8□□□□□ -2.54
SRP54-207ENST00000555535 NRKQ7Z2Y5 1582 aa-0.8□□□□□ -2.54
SRP54-207ENST00000555535 EDC4Q6P2E9 1401 aaKnown RBP-0.81□□□□□ -2.54
SRP54-207ENST00000555535 SPHKAPQ2M3C7 1700 aa-0.81□□□□□ -2.54
SRP54-207ENST00000555535 RYR2Q92736 4967 aa-0.81□□□□□ -2.54
SRP54-207ENST00000555535 SPTY2D1-AS1A0A0U1RR47 76 aa-0.81□□□□□ -2.54
SRP54-207ENST00000555535 H0Y9P7 68 aa-0.81□□□□□ -2.54
SRP54-207ENST00000555535 CDKN2A-AS1Q9UH64 79 aa-0.81□□□□□ -2.54
SRP54-207ENST00000555535 TEP1Q99973 2627 aaKnown RBP-0.81□□□□□ -2.54
SRP54-207ENST00000555535 TROQ12816 1431 aaPredicted RBP-0.81□□□□□ -2.54
SRP54-207ENST00000555535 DNAH3Q8TD57 4116 aa-0.82□□□□□ -2.54
SRP54-207ENST00000555535 TNRC18O15417 2968 aaPredicted RBP-0.82□□□□□ -2.54
SRP54-207ENST00000555535 ARHGAP5Q13017 1502 aa-0.82□□□□□ -2.54
SRP54-207ENST00000555535 CUBNO60494 3623 aa-0.82□□□□□ -2.54
SRP54-207ENST00000555535 A0A0G2JND7 137 aa-0.82□□□□□ -2.54
SRP54-207ENST00000555535 TMEM262E9PQX1 116 aa-0.82□□□□□ -2.54
SRP54-207ENST00000555535 CCL22O00626 93 aa-0.82□□□□□ -2.54
SRP54-207ENST00000555535 S100A1P23297 94 aa-0.82□□□□□ -2.54
SRP54-207ENST00000555535 LINC00846Q9NV44 126 aa-0.82□□□□□ -2.54
SRP54-207ENST00000555535 RGPD3A6NKT7 1758 aaPredicted RBP-0.83□□□□□ -2.54
SRP54-207ENST00000555535 RGPD4Q7Z3J3 1758 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 MYO18BQ8IUG5 2567 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 QSER1Q2KHR3 1735 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 CRYBG1Q9Y4K1 1723 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 MRC2Q9UBG0 1479 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 TRBV7-7A0A0K0K1E9 115 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 hADV29S1A0JD25 119 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 ARMS2P0C7Q2 107 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 PSMG4Q5JS54 123 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 HIGD1BQ9P298 99 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 CICQ96RK0 1608 aaPredicted RBP-0.83□□□□□ -2.54
SRP54-207ENST00000555535 SCN11AQ9UI33 1791 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 AKAP9Q99996 3911 aa-0.83□□□□□ -2.54
SRP54-207ENST00000555535 PKHD1L1Q86WI1 4243 aa-0.84□□□□□ -2.54
SRP54-207ENST00000555535 PRRC2CQ9Y520 2896 aaKnown RBP-0.84□□□□□ -2.54
SRP54-207ENST00000555535 RNF213Q63HN8 5207 aa-0.84□□□□□ -2.54
SRP54-207ENST00000555535 KRTDAPP60985 99 aa-0.84□□□□□ -2.54
SRP54-207ENST00000555535 PPP3R1P63098 170 aa-0.84□□□□□ -2.54
SRP54-207ENST00000555535 NCOA3Q9Y6Q9 1424 aa-0.84□□□□□ -2.54
SRP54-207ENST00000555535 VPS13DQ5THJ4 4388 aa-0.84□□□□□ -2.54
SRP54-207ENST00000555535 DSPP15924 2871 aaKnown RBP-0.85□□□□□ -2.55
SRP54-207ENST00000555535 DNAH9Q9NYC9 4486 aa-0.85□□□□□ -2.55
SRP54-207ENST00000555535 GNG4P50150 75 aa-0.85□□□□□ -2.55
SRP54-207ENST00000555535 C1orf54Q8WWF1 131 aa-0.85□□□□□ -2.55
SRP54-207ENST00000555535 CGREF1Q99674 301 aa-0.85□□□□□ -2.55
SRP54-207ENST00000555535 USP9XQ93008 2570 aaPredicted RBP-0.85□□□□□ -2.55
SRP54-207ENST00000555535 VPS13BQ7Z7G8 4022 aa-0.86□□□□□ -2.55
SRP54-207ENST00000555535 TACC2O95359 2948 aa-0.86□□□□□ -2.55
SRP54-207ENST00000555535 CLIP1P30622 1438 aa-0.86□□□□□ -2.55
SRP54-207ENST00000555535 TMEM218A2RU14 115 aa-0.86□□□□□ -2.55
SRP54-207ENST00000555535 PMCHL1Q16048 86 aa-0.86□□□□□ -2.55
SRP54-207ENST00000555535 PSENENQ9NZ42 101 aa-0.86□□□□□ -2.55
SRP54-207ENST00000555535 CACFD1Q9UGQ2 172 aa-0.86□□□□□ -2.55
SRP54-207ENST00000555535 PREX1Q8TCU6 1659 aa-0.86□□□□□ -2.55
SRP54-207ENST00000555535 MUC17Q685J3 4493 aa-0.87□□□□□ -2.55
SRP54-207ENST00000555535 ANKRD50Q9ULJ7 1429 aa-0.87□□□□□ -2.55
SRP54-207ENST00000555535 A0A1B0GV90 55 aa-0.87□□□□□ -2.55
SRP54-207ENST00000555535 RPL13AP3Q6NVV1 102 aa-0.87□□□□□ -2.55
SRP54-207ENST00000555535 AP4S1Q9Y587 144 aa-0.87□□□□□ -2.55
SRP54-207ENST00000555535 PZPP20742 1482 aa-0.87□□□□□ -2.55
SRP54-207ENST00000555535 EIF4G3O43432 1585 aaKnown RBP-0.87□□□□□ -2.55
SRP54-207ENST00000555535 CCDC168Q8NDH2 2452 aa-0.88□□□□□ -2.55
SRP54-207ENST00000555535 ALKQ9UM73 1620 aa-0.88□□□□□ -2.55
SRP54-207ENST00000555535 MT1AP04731 61 aa-0.88□□□□□ -2.55
SRP54-207ENST00000555535 S100A12P80511 92 aa-0.88□□□□□ -2.55
SRP54-207ENST00000555535 TMEM203Q969S6 136 aa-0.88□□□□□ -2.55
SRP54-207ENST00000555535 GNG8Q9UK08 70 aa-0.88□□□□□ -2.55
SRP54-207ENST00000555535 IER3IP1Q9Y5U9 82 aa-0.88□□□□□ -2.55
SRP54-207ENST00000555535 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.88□□□□□ -2.55
SRP54-207ENST00000555535 REV3LO60673 3130 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 HTTP42858 3142 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 MAPKBP1O60336 1514 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 APOBP04114 4563 aaKnown RBP-0.89□□□□□ -2.55
SRP54-207ENST00000555535 TRBV25-1A0A075B6N4 114 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 GNGT2O14610 69 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 HMGN1P05114 100 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 UQCRHP07919 91 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 GTF2H5Q6ZYL4 71 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 MLH3Q9UHC1 1453 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 SUPT6HQ7KZ85 1726 aaKnown RBP-0.89□□□□□ -2.55
SRP54-207ENST00000555535 TIAM2Q8IVF5 1701 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 FAM135AQ9P2D6 1515 aa-0.89□□□□□ -2.55
SRP54-207ENST00000555535 TEX15Q9BXT5 2789 aa-0.9□□□□□ -2.55
SRP54-207ENST00000555535 CLTCQ00610 1675 aaKnown RBP-0.9□□□□□ -2.55
SRP54-207ENST00000555535 SAMD9Q5K651 1589 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms