RNA–Protein interactions for RNA: ENST00000554575.2

RAD51B-220, Transcript of RAD51 paralog B, humanhuman

TSL 5

Gene RAD51B, Length 292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-220ENST00000554575 KNTC1P50748 2209 aa0.6□□□□□ -2.31
RAD51B-220ENST00000554575 C3P01024 1663 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 CPS1P31327 1500 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 RP1L1Q8IWN7 2480 aaPredicted RBP0.59□□□□□ -2.31
RAD51B-220ENST00000554575 IQGAP2Q13576 1575 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 GOLGA4Q13439 2230 aaKnown RBP0.59□□□□□ -2.31
RAD51B-220ENST00000554575 ASXL3Q9C0F0 2248 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.59□□□□□ -2.31
RAD51B-220ENST00000554575 A0A096LNT2 108 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 TRAV21A0A0B4J279 112 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 LINC00959A0A1B0GUT2 108 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 A0A1B0GUT8 65 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 LINC01549A6NIU2 74 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 H0Y9P7 68 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 M0R3E3 92 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 NDUFB1O75438 58 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 SPINT3P49223 89 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 FXYD4P59646 89 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 NCBP2-AS2Q69YL0 99 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 TMEM263Q8WUH6 116 aaKnown RBP0.59□□□□□ -2.31
RAD51B-220ENST00000554575 LINC00208Q96KT6 92 aa0.59□□□□□ -2.31
RAD51B-220ENST00000554575 COL14A1Q05707 1796 aaKnown RBP0.59□□□□□ -2.32
RAD51B-220ENST00000554575 AHCTF1Q8WYP5 2266 aa0.59□□□□□ -2.32
RAD51B-220ENST00000554575 BPTFQ12830 3046 aa0.59□□□□□ -2.32
RAD51B-220ENST00000554575 UBR3Q6ZT12 1888 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 LY75O60449 1722 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 PKD1L3Q7Z443 1732 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 DOT1LQ8TEK3 1739 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 BCORQ6W2J9 1755 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 NESP48681 1621 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 TRBV6-1A0A0K0K1D8 114 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 H3BVH4 76 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 COX17Q14061 63 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 NREPQ16612 68 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 FDCSPQ8NFU4 85 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 FAM103A1Q9BTL3 118 aaKnown RBP0.58□□□□□ -2.32
RAD51B-220ENST00000554575 NMES1Q9C002 83 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 WFDC10AQ9H1F0 79 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 CMC2Q9NRP2 79 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 TMEM14CQ9P0S9 112 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 ZDBF2Q9HCK1 2354 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 CADP27708 2225 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 TIAM2Q8IVF5 1701 aa0.58□□□□□ -2.32
RAD51B-220ENST00000554575 PAPPA2Q9BXP8 1791 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 ZNF236Q9UL36 1845 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 CACNA1BQ00975 2339 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.57□□□□□ -2.328e-10■■■■□ 20.2
RAD51B-220ENST00000554575 TRGV1A0A0A0MS02 117 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 LINC01546A6NGU7 62 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 IGIPA6NJ69 53 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 DEFB114Q30KQ6 69 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 C10orf113Q5VZT2 155 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 DEFB107AQ8IZN7 70 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 SMIM4Q8WVI0 70 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 GNG13Q9P2W3 67 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 CNOT1A5YKK6 2376 aaKnown RBP0.57□□□□□ -2.32
RAD51B-220ENST00000554575 TRPM2O94759 1503 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 JMJD1CQ15652 2540 aa0.57□□□□□ -2.32
RAD51B-220ENST00000554575 NRXN3Q9Y4C0 1643 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 NAV3Q8IVL0 2385 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 C5P01031 1676 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 TECTAO75443 2155 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 LRRC37A2A6NM11 1700 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 CDC42BPAQ5VT25 1732 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 FMN2Q9NZ56 1722 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 ATP7AQ04656 1500 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 TULP4Q9NRJ4 1543 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 TRAV1-2A0A0B4J238 106 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 CTXND1A0A1B0GTU2 59 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 SMIM27A0A1W2PRY6 76 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 G3V318 75 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 DNAL4O96015 105 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 COX6B1P14854 86 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 CAV3P56539 151 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 ENHOQ6UWT2 76 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 TOMM5Q8N4H5 51 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 PLAC4Q8WY50 150 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 CCL19Q99731 98 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 KCNQ1DNQ9H478 68 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 SSC5DA1L4H1 1573 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 ABCC8Q09428 1581 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 FAM208BQ5VWN6 2430 aa0.56□□□□□ -2.32
RAD51B-220ENST00000554575 URB1O60287 2271 aaKnown RBP0.55□□□□□ -2.32
RAD51B-220ENST00000554575 NOTCH1P46531 2555 aa0.55□□□□□ -2.32
RAD51B-220ENST00000554575 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
RAD51B-220ENST00000554575 GVQW2A0A096LPI5 108 aaPredicted RBP0.55□□□□□ -2.32
RAD51B-220ENST00000554575 PIN1P1O15428 100 aa0.55□□□□□ -2.32
RAD51B-220ENST00000554575 LY6G6CO95867 125 aa0.55□□□□□ -2.32
RAD51B-220ENST00000554575 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.55□□□□□ -2.32
RAD51B-220ENST00000554575 Q6ZQY7 126 aa0.55□□□□□ -2.32
RAD51B-220ENST00000554575 Q6ZRX8 168 aa0.55□□□□□ -2.32
RAD51B-220ENST00000554575 CACNA1EQ15878 2313 aa0.55□□□□□ -2.32
RAD51B-220ENST00000554575 NRAPQ86VF7 1730 aa0.55□□□□□ -2.32
RAD51B-220ENST00000554575 PRKDCP78527 4128 aaKnown RBP0.54□□□□□ -2.32
RAD51B-220ENST00000554575 PIEZO2Q9H5I5 2752 aa0.54□□□□□ -2.32
RAD51B-220ENST00000554575 FAM208AQ9UK61 1670 aaKnown RBP0.54□□□□□ -2.32
RAD51B-220ENST00000554575 K7EMI3 77 aa0.54□□□□□ -2.32
RAD51B-220ENST00000554575 NDUFA4O00483 81 aa0.54□□□□□ -2.32
RAD51B-220ENST00000554575 ACYP2P14621 99 aa0.54□□□□□ -2.32
RAD51B-220ENST00000554575 COX7BP24311 80 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms