RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 C2orf83Q53S99 150 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 KPRPQ5T749 579 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-227ENST00000554491 AMELXQ99217 191 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 SNURFQ9Y675 71 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 WNK2Q9Y3S1 2297 aa3.04□□□□□ -1.92
ATXN3-227ENST00000554491 DNAH9Q9NYC9 4486 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 IGLV3-9A0A075B6K5 115 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 TRBV6-8A0A0A6YYG3 113 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 A0A0J9YXY3 114 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 LEPROTO15243 131 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 ERHP84090 104 aaKnown RBP3.03□□□□□ -1.92
ATXN3-227ENST00000554491 PRCDQ00LT1 54 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 C9orf116Q5BN46 136 aaPredicted RBP3.03□□□□□ -1.92
ATXN3-227ENST00000554491 Q5VV11 94 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 KLHL30-AS1Q8NEE0 82 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 SPTSSBQ8NFR3 76 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 TMEM254Q8TBM7 123 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 TMEM14CQ9P0S9 112 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 LYSTQ99698 3801 aa3.03□□□□□ -1.92
ATXN3-227ENST00000554491 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 TET2Q6N021 2002 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-227ENST00000554491 IGHV1-18A0A0C4DH31 117 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 M0R1W7 72 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 C17orf58Q2M2W7 97 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 C15orf32Q32M92 178 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 ZNF833PQ6ZTB9 187 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 Q86TA4 180 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 ZNRF1Q8ND25 227 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 CHCHD10Q8WYQ3 142 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-227ENST00000554491 LITAFQ99732 161 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 CNFNQ9BYD5 112 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 ZNF702PQ9H963 129 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 C22orf24Q9Y442 160 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 HEATR1Q9H583 2144 aaKnown RBP3.02□□□□□ -1.93
ATXN3-227ENST00000554491 AGRNO00468 2067 aa3.02□□□□□ -1.93
ATXN3-227ENST00000554491 LYZL1Q6UWQ5 148 aa3.01□□□□□ -1.93
ATXN3-227ENST00000554491 ENHOQ6UWT2 76 aa3.01□□□□□ -1.93
ATXN3-227ENST00000554491 TMEM61Q8N0U2 210 aa3.01□□□□□ -1.93
ATXN3-227ENST00000554491 C14orf178Q8N769 122 aaPredicted RBP3.01□□□□□ -1.93
ATXN3-227ENST00000554491 TMEM167AQ8TBQ9 72 aa3.01□□□□□ -1.93
ATXN3-227ENST00000554491 RNF5Q99942 180 aa3.01□□□□□ -1.93
ATXN3-227ENST00000554491 UBL5Q9BZL1 73 aa3.01□□□□□ -1.93
ATXN3-227ENST00000554491 NDUFA4L2Q9NRX3 87 aa3.01□□□□□ -1.93
ATXN3-227ENST00000554491 KIF25-AS1Q9Y6Z4 181 aa3.01□□□□□ -1.93
ATXN3-227ENST00000554491 IGHV3-43A0A0B4J1X8 118 aa3□□□□□ -1.93
ATXN3-227ENST00000554491 LCE6AA0A183 80 aa3□□□□□ -1.93
ATXN3-227ENST00000554491 B4DSR2 109 aa3□□□□□ -1.93
ATXN3-227ENST00000554491 JMJD7-PLA2G4BH0Y9G9 81 aa3□□□□□ -1.93
ATXN3-227ENST00000554491 PSCAO43653 123 aa3□□□□□ -1.93
ATXN3-227ENST00000554491 TRGV3P03979 118 aa3□□□□□ -1.93
ATXN3-227ENST00000554491 SAA2P0DJI9 122 aaPredicted RBP3□□□□□ -1.93
ATXN3-227ENST00000554491 IGHV3-43DP0DP04 118 aa3□□□□□ -1.93
ATXN3-227ENST00000554491 RPL27AP46776 148 aaKnown RBP3□□□□□ -1.93
ATXN3-227ENST00000554491 LINC00242Q5T6M2 205 aa3□□□□□ -1.93
ATXN3-227ENST00000554491 KAAG1Q9UBP8 84 aa3□□□□□ -1.93
ATXN3-227ENST00000554491 STAB2Q8WWQ8 2551 aa3□□□□□ -1.93
ATXN3-227ENST00000554491 KIAA1109Q2LD37 5005 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 LOC101927531A0A1B0GV80 90 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 K7EQG2 157 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 MSMBP08118 114 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 PDE6HQ13956 83 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 MIAQ16674 131 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 RPL39P5Q59GN2 51 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 C10orf113Q5VZT2 155 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 LYPD1Q8N2G4 141 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 C1orf64Q8NEQ6 169 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 GAFA1Q96PS6 74 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 ABCA13Q86UQ4 5058 aa2.99□□□□□ -1.93
ATXN3-227ENST00000554491 DNAH7Q8WXX0 4024 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 IGLV4-69A0A075B6H9 119 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 IGHV3OR16-13A0A075B7E8 117 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 IGHV3-16A0A0C4DH30 117 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 H0YGX0 51 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 IGHV1-46P01743 117 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 ELOF1P60002 83 aaKnown RBP2.98□□□□□ -1.93
ATXN3-227ENST00000554491 MOBPQ13875 183 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 NREPQ16612 68 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 SPINK9Q5DT21 86 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 SMIM2Q9BVW6 85 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 CDC42SE2Q9NRR3 84 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 TANC2Q9HCD6 1990 aa2.98□□□□□ -1.93
ATXN3-227ENST00000554491 IGKV1OR2-108A0A075B7D4 117 aa2.97□□□□□ -1.93
ATXN3-227ENST00000554491 TRAV10A0A0B4J240 114 aa2.97□□□□□ -1.93
ATXN3-227ENST00000554491 CDK2AP2O75956 126 aa2.97□□□□□ -1.93
ATXN3-227ENST00000554491 TSPEAR-AS2P59090 65 aa2.97□□□□□ -1.93
ATXN3-227ENST00000554491 CASC10Q5T4H9 136 aa2.97□□□□□ -1.93
ATXN3-227ENST00000554491 CASC2Q6XLA1 102 aa2.97□□□□□ -1.93
ATXN3-227ENST00000554491 RETNLBQ9BQ08 111 aa2.97□□□□□ -1.93
ATXN3-227ENST00000554491 XAGE1AQ9HD64 81 aa2.97□□□□□ -1.93
ATXN3-227ENST00000554491 C14orf132Q9NPU4 83 aa2.97□□□□□ -1.93
ATXN3-227ENST00000554491 MRPL36Q9P0J6 103 aaKnown RBP2.97□□□□□ -1.93
ATXN3-227ENST00000554491 STARD9Q9P2P6 4700 aa2.96□□□□□ -1.94
ATXN3-227ENST00000554491 ARHGAP32A7KAX9 2087 aa2.96□□□□□ -1.94
ATXN3-227ENST00000554491 IGKV1D-37A0A075B6S9 117 aa2.96□□□□□ -1.94
ATXN3-227ENST00000554491 TRAV12-3A0A0B4J271 114 aa2.96□□□□□ -1.94
ATXN3-227ENST00000554491 IGHV3-64DA0A0J9YX35 117 aa2.96□□□□□ -1.94
ATXN3-227ENST00000554491 A6NED7 52 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms