RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 M0R378 163 aa10.92□□□□□ -0.66
CPSF2-203ENST00000554290 KRTAP3-3Q9BYR6 98 aa10.92□□□□□ -0.66
CPSF2-203ENST00000554290 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
CPSF2-203ENST00000554290 CTAG1AP78358 180 aa10.91□□□□□ -0.66
CPSF2-203ENST00000554290 LINC00158P58513 81 aa10.9□□□□□ -0.66
CPSF2-203ENST00000554290 CBLN2Q8IUK8 224 aa10.9□□□□□ -0.66
CPSF2-203ENST00000554290 PLEKHB2Q96CS7 222 aa10.9□□□□□ -0.66
CPSF2-203ENST00000554290 RETNLBQ9BQ08 111 aa10.9□□□□□ -0.66
CPSF2-203ENST00000554290 CHTOPQ9Y3Y2 248 aaKnown RBP10.9□□□□□ -0.66
CPSF2-203ENST00000554290 Q8NDZ9 215 aa10.89□□□□□ -0.67
CPSF2-203ENST00000554290 HIGD2AQ9BW72 106 aa10.87□□□□□ -0.67
CPSF2-203ENST00000554290 ATP6V1G1O75348 118 aa10.85□□□□□ -0.67
CPSF2-203ENST00000554290 APOC3P02656 99 aa10.85□□□□□ -0.67
CPSF2-203ENST00000554290 MUC2Q02817 5179 aa10.84□□□□□ -0.67
CPSF2-203ENST00000554290 A0A0U1RRA0 63 aa10.84□□□□□ -0.67
CPSF2-203ENST00000554290 TMEM223A0PJW6 202 aa10.84□□□□□ -0.67
CPSF2-203ENST00000554290 CDIP1Q9H305 208 aa10.84□□□□□ -0.67
CPSF2-203ENST00000554290 IGLV7-46A0A075B6I9 117 aa10.83□□□□□ -0.68
CPSF2-203ENST00000554290 TRAV12-1A0A0B4J245 112 aa10.83□□□□□ -0.68
CPSF2-203ENST00000554290 SNAPINO95295 136 aa10.83□□□□□ -0.68
CPSF2-203ENST00000554290 NDUFA5Q16718 116 aa10.83□□□□□ -0.68
CPSF2-203ENST00000554290 TPRXLQ17RH7 258 aa10.83□□□□□ -0.68
CPSF2-203ENST00000554290 CHCHD1Q96BP2 118 aaKnown RBP10.83□□□□□ -0.68
CPSF2-203ENST00000554290 SPAG11AQ6PDA7 123 aa10.82□□□□□ -0.68
CPSF2-203ENST00000554290 SVBPQ8N300 66 aa10.82□□□□□ -0.68
CPSF2-203ENST00000554290 C3orf22Q8N5N4 141 aa10.82□□□□□ -0.68
CPSF2-203ENST00000554290 IFI27L1Q96BM0 104 aa10.82□□□□□ -0.68
CPSF2-203ENST00000554290 SPRR4Q96PI1 79 aa10.81□□□□□ -0.68
CPSF2-203ENST00000554290 ZNF706Q9Y5V0 76 aaPredicted RBP10.81□□□□□ -0.68
CPSF2-203ENST00000554290 SMIM13P0DJ93 91 aa10.8□□□□□ -0.68
CPSF2-203ENST00000554290 HERV-K104P63124 156 aa10.8□□□□□ -0.68
CPSF2-203ENST00000554290 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
CPSF2-203ENST00000554290 BOD1L2Q8IYS8 172 aa10.8□□□□□ -0.68
CPSF2-203ENST00000554290 LINC00587B1AMM8 73 aa10.79□□□□□ -0.68
CPSF2-203ENST00000554290 PRYO14603 147 aa10.79□□□□□ -0.68
CPSF2-203ENST00000554290 C4orf48Q5BLP8 95 aa10.78□□□□□ -0.68
CPSF2-203ENST00000554290 MIR7-3HGQ8N6C7 128 aa10.77□□□□□ -0.69
CPSF2-203ENST00000554290 LINC00337Q8N6G1 96 aa10.76□□□□□ -0.69
CPSF2-203ENST00000554290 PPDPFQ9H3Y8 114 aa10.76□□□□□ -0.69
CPSF2-203ENST00000554290 NCR3O14931 201 aa10.75□□□□□ -0.69
CPSF2-203ENST00000554290 MAP1LC3CQ9BXW4 147 aa10.75□□□□□ -0.69
CPSF2-203ENST00000554290 KCNQ1DNQ9H478 68 aa10.75□□□□□ -0.69
CPSF2-203ENST00000554290 NDUFA12Q9UI09 145 aa10.75□□□□□ -0.69
CPSF2-203ENST00000554290 MYMXA0A1B0GTQ4 84 aa10.74□□□□□ -0.69
CPSF2-203ENST00000554290 ETDCA0A1B0GVM5 59 aa10.74□□□□□ -0.69
CPSF2-203ENST00000554290 HSBP1O75506 76 aa10.74□□□□□ -0.69
CPSF2-203ENST00000554290 SPRR1AP35321 89 aa10.74□□□□□ -0.69
CPSF2-203ENST00000554290 S100A12P80511 92 aa10.74□□□□□ -0.69
CPSF2-203ENST00000554290 SMCR5Q8TEV8 140 aa10.73□□□□□ -0.69
CPSF2-203ENST00000554290 YPEL4Q96NS1 127 aa10.73□□□□□ -0.69
CPSF2-203ENST00000554290 FP248Q71RG6 208 aaPredicted RBP10.72□□□□□ -0.69
CPSF2-203ENST00000554290 TRBV10-3A0A0K0K1G6 114 aa10.71□□□□□ -0.69
CPSF2-203ENST00000554290 FAM19A2Q8N3H0 131 aa10.71□□□□□ -0.69
CPSF2-203ENST00000554290 KRTAP4-16G5E9R7 235 aaPredicted RBP10.7□□□□□ -0.7
CPSF2-203ENST00000554290 DAND5Q8N907 189 aa10.7□□□□□ -0.7
CPSF2-203ENST00000554290 Q8NBF4 154 aa10.7□□□□□ -0.7
CPSF2-203ENST00000554290 H0Y8G0 127 aa10.69□□□□□ -0.7
CPSF2-203ENST00000554290 LCE2AQ5TA79 106 aaPredicted RBP10.68□□□□□ -0.7
CPSF2-203ENST00000554290 SPINK1P00995 79 aa10.67□□□□□ -0.7
CPSF2-203ENST00000554290 LEPROTO15243 131 aa10.66□□□□□ -0.7
CPSF2-203ENST00000554290 LEPROTL1O95214 131 aa10.66□□□□□ -0.7
CPSF2-203ENST00000554290 LINC00483Q53H64 154 aa10.66□□□□□ -0.7
CPSF2-203ENST00000554290 LOC107984156A0A0G2JMH3 177 aa10.65□□□□□ -0.7
CPSF2-203ENST00000554290 TRBV10-2A0A0K0K1G8 114 aa10.65□□□□□ -0.7
CPSF2-203ENST00000554290 B5MCH6 92 aa10.65□□□□□ -0.7
CPSF2-203ENST00000554290 PLNP26678 52 aa10.65□□□□□ -0.7
CPSF2-203ENST00000554290 GAGE2AQ6NT46 116 aa10.65□□□□□ -0.7
CPSF2-203ENST00000554290 ARL17AQ8IVW1 177 aa10.65□□□□□ -0.7
CPSF2-203ENST00000554290 DDTP30046 118 aa10.64□□□□□ -0.71
CPSF2-203ENST00000554290 TSPEAR-AS2P59090 65 aa10.64□□□□□ -0.71
CPSF2-203ENST00000554290 J3QQQ9 107 aa10.63□□□□□ -0.71
CPSF2-203ENST00000554290 HERVK_113P61574 105 aa10.63□□□□□ -0.71
CPSF2-203ENST00000554290 MIEN1Q9BRT3 115 aa10.63□□□□□ -0.71
CPSF2-203ENST00000554290 KRTAP9-2Q9BYQ4 174 aa10.63□□□□□ -0.71
CPSF2-203ENST00000554290 TRGC2P03986 189 aa10.62□□□□□ -0.71
CPSF2-203ENST00000554290 SERF1AO75920 110 aa10.61□□□□□ -0.71
CPSF2-203ENST00000554290 DPM2O94777 84 aa10.61□□□□□ -0.71
CPSF2-203ENST00000554290 NMUP48645 174 aa10.61□□□□□ -0.71
CPSF2-203ENST00000554290 SSBP3-AS1Q7Z2R9 100 aa10.61□□□□□ -0.71
CPSF2-203ENST00000554290 SPANXB1Q9NS25 103 aaPredicted RBP10.61□□□□□ -0.71
CPSF2-203ENST00000554290 HSPB8Q9UJY1 196 aa10.61□□□□□ -0.71
CPSF2-203ENST00000554290 IGLV9-49A0A0B4J1Y8 123 aa10.6□□□□□ -0.71
CPSF2-203ENST00000554290 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
CPSF2-203ENST00000554290 MOBPQ13875 183 aa10.6□□□□□ -0.71
CPSF2-203ENST00000554290 KRTAP13-3Q3SY46 172 aa10.6□□□□□ -0.71
CPSF2-203ENST00000554290 ERC2-IT1O76042 136 aa10.59□□□□□ -0.71
CPSF2-203ENST00000554290 NDUFC2O95298 119 aa10.59□□□□□ -0.71
CPSF2-203ENST00000554290 S100A7L2Q5SY68 101 aa10.59□□□□□ -0.71
CPSF2-203ENST00000554290 Q6ZRX8 168 aa10.59□□□□□ -0.71
CPSF2-203ENST00000554290 FABP4P15090 132 aa10.58□□□□□ -0.72
CPSF2-203ENST00000554290 Q9BRP9 147 aa10.58□□□□□ -0.72
CPSF2-203ENST00000554290 IGKCP01834 107 aa10.57□□□□□ -0.72
CPSF2-203ENST00000554290 LINC00310P59036 64 aa10.57□□□□□ -0.72
CPSF2-203ENST00000554290 RPS29P62273 56 aaKnown RBP10.57□□□□□ -0.72
CPSF2-203ENST00000554290 JOSD1Q15040 202 aaPredicted RBP10.57□□□□□ -0.72
CPSF2-203ENST00000554290 IGLV6-57P01721 117 aa10.56□□□□□ -0.72
CPSF2-203ENST00000554290 ASB16-AS1Q495Z4 193 aa10.55□□□□□ -0.72
CPSF2-203ENST00000554290 PMCHL2Q9BQD1 86 aa10.55□□□□□ -0.72
CPSF2-203ENST00000554290 FAT4Q6V0I7 4981 aa10.54□□□□□ -0.72
CPSF2-203ENST00000554290 SLC25A20O43772 301 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms