RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 CDC42SE2Q9NRR3 84 aa6.28□□□□□ -1.4
AL049839.2-201ENST00000553947 IGKV2-28A0A075B6P5 120 aa6.27□□□□□ -1.41
AL049839.2-201ENST00000553947 TRBV6-4A0A1B0GX49 114 aa6.27□□□□□ -1.41
AL049839.2-201ENST00000553947 IGKV2D-28P01615 120 aa6.27□□□□□ -1.41
AL049839.2-201ENST00000553947 NBEAL2Q6ZNJ1 2754 aa6.27□□□□□ -1.41
AL049839.2-201ENST00000553947 TRAV10A0A0B4J240 114 aa6.27□□□□□ -1.41
AL049839.2-201ENST00000553947 DEFB130BP0DP73 79 aa6.27□□□□□ -1.41
AL049839.2-201ENST00000553947 DEFB130AP0DP74 79 aa6.27□□□□□ -1.41
AL049839.2-201ENST00000553947 IGKV3OR2-268A0A0C4DH90 116 aa6.27□□□□□ -1.41
AL049839.2-201ENST00000553947 PMAIP1Q13794 54 aa6.26□□□□□ -1.41
AL049839.2-201ENST00000553947 X6R8D5 127 aa6.26□□□□□ -1.41
AL049839.2-201ENST00000553947 TRRAPQ9Y4A5 3859 aa6.26□□□□□ -1.41
AL049839.2-201ENST00000553947 HIVEP1P15822 2718 aa6.26□□□□□ -1.41
AL049839.2-201ENST00000553947 FAM19A3Q7Z5A8 133 aa6.26□□□□□ -1.41
AL049839.2-201ENST00000553947 TRBV10-3A0A0K0K1G6 114 aa6.25□□□□□ -1.41
AL049839.2-201ENST00000553947 UBE2L6O14933 153 aa6.25□□□□□ -1.41
AL049839.2-201ENST00000553947 IGLV4-60A0A075B6I1 120 aa6.24□□□□□ -1.41
AL049839.2-201ENST00000553947 NDUFC1O43677 76 aa6.24□□□□□ -1.41
AL049839.2-201ENST00000553947 MIFP14174 115 aa6.24□□□□□ -1.41
AL049839.2-201ENST00000553947 CCL18P55774 89 aa6.24□□□□□ -1.41
AL049839.2-201ENST00000553947 RETNQ9HD89 108 aa6.24□□□□□ -1.41
AL049839.2-201ENST00000553947 TMEM256-PLSCR3K7ERE1 68 aa6.24□□□□□ -1.41
AL049839.2-201ENST00000553947 LINC00612Q8N6U2 182 aa6.24□□□□□ -1.41
AL049839.2-201ENST00000553947 C11orf68Q9H3H3 251 aaKnown RBP6.24□□□□□ -1.41
AL049839.2-201ENST00000553947 TRBV6-8A0A0A6YYG3 113 aa6.23□□□□□ -1.41
AL049839.2-201ENST00000553947 DEFB4AO15263 64 aa6.23□□□□□ -1.41
AL049839.2-201ENST00000553947 FAM229BQ4G0N7 80 aa6.23□□□□□ -1.41
AL049839.2-201ENST00000553947 C9orf66Q5T8R8 295 aa6.23□□□□□ -1.41
AL049839.2-201ENST00000553947 ATP5EP56381 51 aaPredicted RBP6.22□□□□□ -1.41
AL049839.2-201ENST00000553947 LAMTOR3Q9UHA4 124 aa6.22□□□□□ -1.41
AL049839.2-201ENST00000553947 A0A087WZ39 114 aa6.22□□□□□ -1.41
AL049839.2-201ENST00000553947 DEFB135Q30KP9 77 aa6.22□□□□□ -1.41
AL049839.2-201ENST00000553947 Q8N3U1 123 aa6.22□□□□□ -1.41
AL049839.2-201ENST00000553947 TM2D3Q9BRN9 247 aa6.22□□□□□ -1.41
AL049839.2-201ENST00000553947 GYPEP15421 78 aa6.22□□□□□ -1.41
AL049839.2-201ENST00000553947 LINC01547P58512 204 aaPredicted RBP6.22□□□□□ -1.41
AL049839.2-201ENST00000553947 COX7B2Q8TF08 81 aa6.22□□□□□ -1.41
AL049839.2-201ENST00000553947 BCE1O60756 84 aa6.21□□□□□ -1.42
AL049839.2-201ENST00000553947 SCXQ7RTU7 201 aa6.21□□□□□ -1.42
AL049839.2-201ENST00000553947 ATRQ13535 2644 aa6.21□□□□□ -1.42
AL049839.2-201ENST00000553947 A0A096LPF7 62 aa6.21□□□□□ -1.42
AL049839.2-201ENST00000553947 LRCOL1A6NCL2 159 aa6.19□□□□□ -1.42
AL049839.2-201ENST00000553947 TEP1Q99973 2627 aaKnown RBP6.19□□□□□ -1.42
AL049839.2-201ENST00000553947 ESRGQ1W209 222 aa6.19□□□□□ -1.42
AL049839.2-201ENST00000553947 Q8N814 137 aa6.19□□□□□ -1.42
AL049839.2-201ENST00000553947 C6orf226Q5I0X4 101 aa6.19□□□□□ -1.42
AL049839.2-201ENST00000553947 TMEM254Q8TBM7 123 aa6.19□□□□□ -1.42
AL049839.2-201ENST00000553947 DAD1P61803 113 aa6.18□□□□□ -1.42
AL049839.2-201ENST00000553947 Q6ZVQ6 151 aa6.18□□□□□ -1.42
AL049839.2-201ENST00000553947 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
AL049839.2-201ENST00000553947 KRTAP3-2Q9BYR7 98 aa6.18□□□□□ -1.42
AL049839.2-201ENST00000553947 IGHV3OR16-9A0A0B4J2B5 98 aa6.18□□□□□ -1.42
AL049839.2-201ENST00000553947 IGHV4-28A0A0C4DH34 117 aa6.18□□□□□ -1.42
AL049839.2-201ENST00000553947 FUSP35637 526 aaKnown RBP eCLIP6.18□□□□□ -1.42
AL049839.2-201ENST00000553947 NREPQ16612 68 aa6.18□□□□□ -1.42
AL049839.2-201ENST00000553947 PRO0255Q9UI72 69 aa6.18□□□□□ -1.42
AL049839.2-201ENST00000553947 CELA1Q9UNI1 258 aa6.17□□□□□ -1.42
AL049839.2-201ENST00000553947 LINC00959A0A1B0GUT2 108 aa6.17□□□□□ -1.42
AL049839.2-201ENST00000553947 PRR3P79522 188 aaKnown RBP6.17□□□□□ -1.42
AL049839.2-201ENST00000553947 LYRM9A8MSI8 78 aa6.16□□□□□ -1.42
AL049839.2-201ENST00000553947 CLPSL2Q6UWE3 100 aa6.16□□□□□ -1.42
AL049839.2-201ENST00000553947 M0R2N4 97 aa6.16□□□□□ -1.42
AL049839.2-201ENST00000553947 APOC4P55056 127 aa6.16□□□□□ -1.42
AL049839.2-201ENST00000553947 Q8NAQ8 132 aa6.16□□□□□ -1.42
AL049839.2-201ENST00000553947 IBA57-AS1B1ANH7 110 aa6.15□□□□□ -1.42
AL049839.2-201ENST00000553947 TRBV7-4A0A0J9YYF1 115 aa6.15□□□□□ -1.43
AL049839.2-201ENST00000553947 BPY2O14599 106 aa6.15□□□□□ -1.43
AL049839.2-201ENST00000553947 IGHV4-30-4P0DP06 118 aa6.14□□□□□ -1.43
AL049839.2-201ENST00000553947 Q6ZQT0 140 aa6.14□□□□□ -1.43
AL049839.2-201ENST00000553947 A0A1B0GUV1 79 aa6.14□□□□□ -1.43
AL049839.2-201ENST00000553947 PRYO14603 147 aa6.14□□□□□ -1.43
AL049839.2-201ENST00000553947 PSPHP1O15172 72 aa6.14□□□□□ -1.43
AL049839.2-201ENST00000553947 PRR15Q8IV56 129 aa6.14□□□□□ -1.43
AL049839.2-201ENST00000553947 C6orf99Q4VX62 202 aa6.13□□□□□ -1.43
AL049839.2-201ENST00000553947 CXCL6P80162 114 aa6.12□□□□□ -1.43
AL049839.2-201ENST00000553947 HTN3P15516 51 aa6.12□□□□□ -1.43
AL049839.2-201ENST00000553947 OXLD1Q5BKU9 147 aa6.12□□□□□ -1.43
AL049839.2-201ENST00000553947 MRPL55Q7Z7F7 128 aaKnown RBP6.12□□□□□ -1.43
AL049839.2-201ENST00000553947 LINC00269Q8N2A0 174 aa6.12□□□□□ -1.43
AL049839.2-201ENST00000553947 F8P00451 2351 aa6.12□□□□□ -1.43
AL049839.2-201ENST00000553947 CD164Q04900 197 aa6.12□□□□□ -1.43
AL049839.2-201ENST00000553947 ZNF561-AS1K7EIQ3 104 aa6.11□□□□□ -1.43
AL049839.2-201ENST00000553947 LINC00167Q96N53 147 aa6.11□□□□□ -1.43
AL049839.2-201ENST00000553947 Q8N9L7 120 aa6.11□□□□□ -1.43
AL049839.2-201ENST00000553947 ANK2Q01484 3957 aa6.11□□□□□ -1.43
AL049839.2-201ENST00000553947 IGLV10-54A0A075B6I4 117 aa6.1□□□□□ -1.43
AL049839.2-201ENST00000553947 KRTAP10-11P60412 298 aa6.1□□□□□ -1.43
AL049839.2-201ENST00000553947 Q6ZRU5 148 aa6.1□□□□□ -1.43
AL049839.2-201ENST00000553947 PRB2P02812 416 aaPredicted RBP6.1□□□□□ -1.43
AL049839.2-201ENST00000553947 HIGD2AQ9BW72 106 aa6.1□□□□□ -1.43
AL049839.2-201ENST00000553947 FBN1P35555 2871 aaKnown RBP6.1□□□□□ -1.43
AL049839.2-201ENST00000553947 BAHCC1Q9P281 2608 aa6.1□□□□□ -1.43
AL049839.2-201ENST00000553947 SPART-AS1P0CW21 52 aa6.1□□□□□ -1.43
AL049839.2-201ENST00000553947 ANGP03950 147 aaKnown RBP6.09□□□□□ -1.43
AL049839.2-201ENST00000553947 CMYA5Q8N3K9 4069 aa6.09□□□□□ -1.44
AL049839.2-201ENST00000553947 KRTAP24-1Q3LI83 254 aa6.09□□□□□ -1.44
AL049839.2-201ENST00000553947 LOC110117498A0A087WWA1 95 aa6.08□□□□□ -1.44
AL049839.2-201ENST00000553947 REG3AQ06141 175 aa6.08□□□□□ -1.44
AL049839.2-201ENST00000553947 CHCHD10Q8WYQ3 142 aaPredicted RBP6.08□□□□□ -1.44
AL049839.2-201ENST00000553947 PDE6GP18545 87 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms