RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 FSHBP01225 129 aa7.95□□□□□ -1.14
SYNE2-208ENST00000553289 DEFB116Q30KQ4 102 aa7.95□□□□□ -1.14
SYNE2-208ENST00000553289 LOC110117498A0A087WWA1 95 aa7.94□□□□□ -1.14
SYNE2-208ENST00000553289 SMIM29Q86T20 159 aa7.93□□□□□ -1.14
SYNE2-208ENST00000553289 ABCA12Q86UK0 2595 aa7.93□□□□□ -1.14
SYNE2-208ENST00000553289 PTPRBP23467 1997 aa7.93□□□□□ -1.14
SYNE2-208ENST00000553289 H3BPC8 53 aa7.92□□□□□ -1.14
SYNE2-208ENST00000553289 FAM218AQ96MZ4 157 aa7.92□□□□□ -1.14
SYNE2-208ENST00000553289 DOPEY1Q5JWR5 2465 aa7.92□□□□□ -1.14
SYNE2-208ENST00000553289 USP9XQ93008 2570 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-208ENST00000553289 PSPHP1O15172 72 aa7.91□□□□□ -1.14
SYNE2-208ENST00000553289 Q6ZQT0 140 aa7.91□□□□□ -1.14
SYNE2-208ENST00000553289 ANKRD11Q6UB99 2663 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-208ENST00000553289 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-208ENST00000553289 Q6ZRX8 168 aa7.9□□□□□ -1.14
SYNE2-208ENST00000553289 MDFIQ99750 246 aa7.9□□□□□ -1.14
SYNE2-208ENST00000553289 Q8NBF4 154 aa7.9□□□□□ -1.14
SYNE2-208ENST00000553289 RETNLBQ9BQ08 111 aa7.89□□□□□ -1.15
SYNE2-208ENST00000553289 RPS28P62857 69 aaKnown RBP7.88□□□□□ -1.15
SYNE2-208ENST00000553289 JMJD1CQ15652 2540 aa7.88□□□□□ -1.15
SYNE2-208ENST00000553289 COL27A1Q8IZC6 1860 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-208ENST00000553289 Q8NAQ8 132 aa7.87□□□□□ -1.15
SYNE2-208ENST00000553289 Q9UF83 564 aa7.87□□□□□ -1.15
SYNE2-208ENST00000553289 LRRK2Q5S007 2527 aa7.87□□□□□ -1.15
SYNE2-208ENST00000553289 FN1P02751 2386 aaKnown RBP7.86□□□□□ -1.15
SYNE2-208ENST00000553289 SPINK1P00995 79 aa7.86□□□□□ -1.15
SYNE2-208ENST00000553289 C16orf90A8MZG2 172 aa7.86□□□□□ -1.15
SYNE2-208ENST00000553289 LITAFQ99732 161 aa7.86□□□□□ -1.15
SYNE2-208ENST00000553289 MOBPQ13875 183 aa7.85□□□□□ -1.15
SYNE2-208ENST00000553289 LINC00476Q8WZB0 136 aa7.85□□□□□ -1.15
SYNE2-208ENST00000553289 SPTBN4Q9H254 2564 aa7.85□□□□□ -1.15
SYNE2-208ENST00000553289 ACYP2P14621 99 aa7.85□□□□□ -1.15
SYNE2-208ENST00000553289 TLN2Q9Y4G6 2542 aa7.85□□□□□ -1.15
SYNE2-208ENST00000553289 PCNTO95613 3336 aa7.85□□□□□ -1.15
SYNE2-208ENST00000553289 ZFYVE26Q68DK2 2539 aa7.84□□□□□ -1.15
SYNE2-208ENST00000553289 PRO0628Q9UI54 55 aa7.83□□□□□ -1.16
SYNE2-208ENST00000553289 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
SYNE2-208ENST00000553289 IGKV2-30P06310 120 aa7.83□□□□□ -1.16
SYNE2-208ENST00000553289 IGLV6-57P01721 117 aa7.82□□□□□ -1.16
SYNE2-208ENST00000553289 TRBV7-4A0A0J9YYF1 115 aa7.81□□□□□ -1.16
SYNE2-208ENST00000553289 CHD8Q9HCK8 2581 aa7.81□□□□□ -1.16
SYNE2-208ENST00000553289 NBDYA0A0U1RRE5 68 aa7.81□□□□□ -1.16
SYNE2-208ENST00000553289 USP9YO00507 2555 aaPredicted RBP7.81□□□□□ -1.16
SYNE2-208ENST00000553289 DNAH10OSP0CZ25 163 aa7.81□□□□□ -1.16
SYNE2-208ENST00000553289 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
SYNE2-208ENST00000553289 EPM2AB3EWF7 344 aa7.81□□□□□ -1.16
SYNE2-208ENST00000553289 A0A1B0GU69 56 aa7.8□□□□□ -1.16
SYNE2-208ENST00000553289 LINC00588Q9Y4M8 146 aa7.8□□□□□ -1.16
SYNE2-208ENST00000553289 TRAV22A0A0B4J277 110 aa7.8□□□□□ -1.16
SYNE2-208ENST00000553289 PHF5AQ7RTV0 110 aaKnown RBP7.8□□□□□ -1.16
SYNE2-208ENST00000553289 VPREB1P12018 145 aa7.8□□□□□ -1.16
SYNE2-208ENST00000553289 HTTP42858 3142 aa7.8□□□□□ -1.16
SYNE2-208ENST00000553289 KRTAP24-1Q3LI83 254 aa7.8□□□□□ -1.16
SYNE2-208ENST00000553289 Q6ZRP5 223 aa7.8□□□□□ -1.16
SYNE2-208ENST00000553289 PCSK5Q92824 1860 aa7.79□□□□□ -1.16
SYNE2-208ENST00000553289 SPACA4Q8TDM5 124 aa7.79□□□□□ -1.16
SYNE2-208ENST00000553289 MUC4Q99102 2169 aa7.78□□□□□ -1.16
SYNE2-208ENST00000553289 RTL8CO15255 209 aa7.78□□□□□ -1.16
SYNE2-208ENST00000553289 CHD7Q9P2D1 2997 aa7.78□□□□□ -1.16
SYNE2-208ENST00000553289 ERC2-IT1O76042 136 aa7.78□□□□□ -1.16
SYNE2-208ENST00000553289 LINC00313P59037 77 aa7.76□□□□□ -1.17
SYNE2-208ENST00000553289 ST20-AS1Q8NBB2 130 aa7.76□□□□□ -1.17
SYNE2-208ENST00000553289 CSNK1G2-AS1Q8NCQ2 148 aa7.76□□□□□ -1.17
SYNE2-208ENST00000553289 C8orf87E5RJ46 101 aa7.75□□□□□ -1.17
SYNE2-208ENST00000553289 TM2D3Q9BRN9 247 aa7.75□□□□□ -1.17
SYNE2-208ENST00000553289 KCNQ1DNQ9H478 68 aa7.74□□□□□ -1.17
SYNE2-208ENST00000553289 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
SYNE2-208ENST00000553289 PKD1L2Q7Z442 2459 aa7.74□□□□□ -1.17
SYNE2-208ENST00000553289 A8MWP4 228 aa7.73□□□□□ -1.17
SYNE2-208ENST00000553289 SETD2Q9BYW2 2564 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-208ENST00000553289 IGLV1-50A0A075B6I6 118 aa7.72□□□□□ -1.17
SYNE2-208ENST00000553289 PRR34Q9NV39 138 aa7.72□□□□□ -1.17
SYNE2-208ENST00000553289 LINC00528Q8N1L1 170 aa7.71□□□□□ -1.17
SYNE2-208ENST00000553289 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.17
SYNE2-208ENST00000553289 ZNF462Q96JM2 2506 aa7.7□□□□□ -1.18
SYNE2-208ENST00000553289 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
SYNE2-208ENST00000553289 SPAG11AQ6PDA7 123 aa7.7□□□□□ -1.18
SYNE2-208ENST00000553289 CHD9Q3L8U1 2897 aa7.69□□□□□ -1.18
SYNE2-208ENST00000553289 LINC00612Q8N6U2 182 aa7.69□□□□□ -1.18
SYNE2-208ENST00000553289 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
SYNE2-208ENST00000553289 SERTAD4-AS1Q5TG53 156 aa7.68□□□□□ -1.18
SYNE2-208ENST00000553289 MRPL34Q9BQ48 92 aaKnown RBP7.68□□□□□ -1.18
SYNE2-208ENST00000553289 RPL37AP61513 92 aaKnown RBP7.67□□□□□ -1.18
SYNE2-208ENST00000553289 CHTF8P0CG12 524 aa7.67□□□□□ -1.18
SYNE2-208ENST00000553289 A0A096LNT2 108 aa7.66□□□□□ -1.18
SYNE2-208ENST00000553289 K7EQZ3 153 aa7.66□□□□□ -1.18
SYNE2-208ENST00000553289 C19orf73Q9NVV2 129 aa7.66□□□□□ -1.18
SYNE2-208ENST00000553289 PLA2G2DQ9UNK4 145 aa7.66□□□□□ -1.18
SYNE2-208ENST00000553289 RANBP2P49792 3224 aaKnown RBP7.66□□□□□ -1.18
SYNE2-208ENST00000553289 FAM168BA1KXE4 195 aa7.65□□□□□ -1.18
SYNE2-208ENST00000553289 TLX1NBP0CAT3 122 aa7.65□□□□□ -1.18
SYNE2-208ENST00000553289 C5orf42Q9H799 3197 aa7.65□□□□□ -1.18
SYNE2-208ENST00000553289 WWC2-AS2Q96NR7 200 aa7.65□□□□□ -1.19
SYNE2-208ENST00000553289 MTORP42345 2549 aa7.64□□□□□ -1.19
SYNE2-208ENST00000553289 ANKRD17O75179 2603 aaKnown RBP7.64□□□□□ -1.19
SYNE2-208ENST00000553289 C15orf56Q8N910 161 aa7.64□□□□□ -1.19
SYNE2-208ENST00000553289 CYP4F30PQ9H0H9 118 aa7.63□□□□□ -1.19
SYNE2-208ENST00000553289 ATP11AUNQ6ZP68 121 aa7.63□□□□□ -1.19
SYNE2-208ENST00000553289 GIG44P09565 113 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-208ENST00000553289 IGFL1Q6UW32 110 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms