RNA–Protein interactions for RNA: ENST00000552346.1

USP15-218, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-218ENST00000552346 ZNF831Q5JPB2 1677 aa0.35□□□□□ -2.35
USP15-218ENST00000552346 RRBP1Q9P2E9 1410 aaKnown RBP0.35□□□□□ -2.35
USP15-218ENST00000552346 ADAMTS12P58397 1594 aa0.35□□□□□ -2.35
USP15-218ENST00000552346 CFAP74Q9C0B2 1584 aa0.35□□□□□ -2.35
USP15-218ENST00000552346 NCOA2Q15596 1464 aa0.35□□□□□ -2.35
USP15-218ENST00000552346 MAP3K4Q9Y6R4 1608 aa0.35□□□□□ -2.35
USP15-218ENST00000552346 SCN11AQ9UI33 1791 aa0.34□□□□□ -2.35
USP15-218ENST00000552346 ARFGEF2Q9Y6D5 1785 aa0.34□□□□□ -2.35
USP15-218ENST00000552346 PLIN4Q96Q06 1357 aa0.34□□□□□ -2.35
USP15-218ENST00000552346 VWFP04275 2813 aa0.34□□□□□ -2.35
USP15-218ENST00000552346 NEXMIFQ5QGS0 1516 aa0.34□□□□□ -2.35
USP15-218ENST00000552346 F8WEM9 126 aa0.34□□□□□ -2.36
USP15-218ENST00000552346 LTN1O94822 1766 aa0.34□□□□□ -2.36
USP15-218ENST00000552346 IQGAP3Q86VI3 1631 aa0.34□□□□□ -2.36
USP15-218ENST00000552346 PTPN23Q9H3S7 1636 aa0.34□□□□□ -2.36
USP15-218ENST00000552346 CELSR1Q9NYQ6 3014 aa0.34□□□□□ -2.36
USP15-218ENST00000552346 CCDC141Q6ZP82 1450 aa0.34□□□□□ -2.36
USP15-218ENST00000552346 CD163L1Q9NR16 1453 aa0.34□□□□□ -2.36
USP15-218ENST00000552346 CHD6Q8TD26 2715 aa0.34□□□□□ -2.36
USP15-218ENST00000552346 ABCA2Q9BZC7 2435 aa0.34□□□□□ -2.36
USP15-218ENST00000552346 ITSN1Q15811 1721 aa0.33□□□□□ -2.36
USP15-218ENST00000552346 CEP170BQ9Y4F5 1589 aaPredicted RBP0.33□□□□□ -2.36
USP15-218ENST00000552346 UACAQ9BZF9 1416 aa0.33□□□□□ -2.36
USP15-218ENST00000552346 NMSQ5H8A3 153 aa0.33□□□□□ -2.36
USP15-218ENST00000552346 ALKAL2Q6UX46 152 aa0.33□□□□□ -2.36
USP15-218ENST00000552346 Q9H521 79 aa0.33□□□□□ -2.36
USP15-218ENST00000552346 ALKQ9UM73 1620 aa0.33□□□□□ -2.36
USP15-218ENST00000552346 ZC3H13Q5T200 1668 aaKnown RBP0.33□□□□□ -2.36
USP15-218ENST00000552346 RGPD1P0DJD0 1748 aa0.33□□□□□ -2.36
USP15-218ENST00000552346 SUPT6HQ7KZ85 1726 aaKnown RBP0.33□□□□□ -2.36
USP15-218ENST00000552346 MYO5CQ9NQX4 1742 aa0.33□□□□□ -2.36
USP15-218ENST00000552346 SAMD9Q5K651 1589 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 RGPD8O14715 1765 aaPredicted RBP0.32□□□□□ -2.36
USP15-218ENST00000552346 RGPD5Q99666 1765 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 CYB5AP00167 134 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 IGLC2P0DOY2 106 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 IGLC3P0DOY3 106 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 SPRR1BP22528 89 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 GNGT1P63211 74 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 DEFB121Q5J5C9 76 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 BVES-AS1Q5T3Y7 98 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 S100A16Q96FQ6 103 aaKnown RBP0.32□□□□□ -2.36
USP15-218ENST00000552346 USMG5Q96IX5 58 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 PSENENQ9NZ42 101 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 RABAC1Q9UI14 185 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 LRRC9Q6ZRR7 1453 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 KIF1AQ12756 1690 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 PARP4Q9UKK3 1724 aaKnown RBP0.32□□□□□ -2.36
USP15-218ENST00000552346 SLIT1O75093 1534 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 ERICH3Q5RHP9 1530 aa0.32□□□□□ -2.36
USP15-218ENST00000552346 PTPN13Q12923 2485 aa0.31□□□□□ -2.36
USP15-218ENST00000552346 MADDQ8WXG6 1647 aa0.31□□□□□ -2.36
USP15-218ENST00000552346 FMN2Q9NZ56 1722 aa0.31□□□□□ -2.36
USP15-218ENST00000552346 PEA15Q15121 130 aa0.31□□□□□ -2.36
USP15-218ENST00000552346 C18orf32Q8TCD1 76 aa0.31□□□□□ -2.36
USP15-218ENST00000552346 ST20Q9HBF5 79 aa0.31□□□□□ -2.36
USP15-218ENST00000552346 THOC2Q8NI27 1593 aaKnown RBP0.31□□□□□ -2.36
USP15-218ENST00000552346 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.31□□□□□ -2.36
USP15-218ENST00000552346 USP32Q8NFA0 1604 aa0.31□□□□□ -2.36
USP15-218ENST00000552346 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
USP15-218ENST00000552346 ABCC1P33527 1531 aa0.3□□□□□ -2.36
USP15-218ENST00000552346 UGGT2Q9NYU1 1516 aa0.3□□□□□ -2.36
USP15-218ENST00000552346 HMGA1P17096 107 aaKnown RBP0.3□□□□□ -2.36
USP15-218ENST00000552346 SNRPFP62306 86 aaKnown RBP0.3□□□□□ -2.36
USP15-218ENST00000552346 LINC00643Q86TS7 51 aa0.3□□□□□ -2.36
USP15-218ENST00000552346 PKD1L3Q7Z443 1732 aa0.3□□□□□ -2.36
USP15-218ENST00000552346 CNOT1A5YKK6 2376 aaKnown RBP0.3□□□□□ -2.36
USP15-218ENST00000552346 CLIP1P30622 1438 aa0.3□□□□□ -2.36
USP15-218ENST00000552346 ANKARQ7Z5J8 1434 aa0.3□□□□□ -2.36
USP15-218ENST00000552346 COL14A1Q05707 1796 aaKnown RBP0.29□□□□□ -2.36
USP15-218ENST00000552346 BCORQ6W2J9 1755 aa0.29□□□□□ -2.36
USP15-218ENST00000552346 ATP7BP35670 1465 aa0.29□□□□□ -2.36
USP15-218ENST00000552346 REV3LO60673 3130 aa0.29□□□□□ -2.36
USP15-218ENST00000552346 IQCF6A8MYZ5 107 aa0.29□□□□□ -2.36
USP15-218ENST00000552346 HMGN2P05204 90 aaKnown RBP0.29□□□□□ -2.36
USP15-218ENST00000552346 S100A13Q99584 98 aa0.29□□□□□ -2.36
USP15-218ENST00000552346 UBE2D4Q9Y2X8 147 aa0.29□□□□□ -2.36
USP15-218ENST00000552346 UBR3Q6ZT12 1888 aa0.29□□□□□ -2.36
USP15-218ENST00000552346 MAGI3Q5TCQ9 1506 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 INO80Q9ULG1 1556 aaPredicted RBP0.28□□□□□ -2.36
USP15-218ENST00000552346 PIK3C2BO00750 1634 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 MROH1Q8NDA8 1641 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 CICQ96RK0 1608 aaPredicted RBP0.28□□□□□ -2.36
USP15-218ENST00000552346 ATRQ13535 2644 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 WIZO95785 1651 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 POLR1AO95602 1720 aaPredicted RBP0.28□□□□□ -2.36
USP15-218ENST00000552346 DOT1LQ8TEK3 1739 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 LCE6AA0A183 80 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 MYMXA0A1B0GTQ4 84 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 SMIM31A0A1B0GVY4 71 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 D6R8Y8 96 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 H3BUT2 72 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 ADIRFQ15847 76 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 HEPN1Q6WQI6 88 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 MUSTN1Q8IVN3 82 aa0.28□□□□□ -2.36
USP15-218ENST00000552346 ASXL1Q8IXJ9 1541 aa0.28□□□□□ -2.37
USP15-218ENST00000552346 GLI2P10070 1586 aa0.28□□□□□ -2.37
USP15-218ENST00000552346 CDC42BPGQ6DT37 1551 aa0.28□□□□□ -2.37
USP15-218ENST00000552346 ABCA9Q8IUA7 1624 aa0.27□□□□□ -2.37
USP15-218ENST00000552346 EIF2AK4Q9P2K8 1649 aaKnown RBP0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 205.5 ms