RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 FAM229AH3BQW9 127 aa13.24□□□□□ -0.29
CTDSP2-204ENST00000548823 EIF4EBP3O60516 100 aaPredicted RBP13.24□□□□□ -0.29
CTDSP2-204ENST00000548823 SMR3BP02814 79 aaPredicted RBP13.24□□□□□ -0.29
CTDSP2-204ENST00000548823 DNAH10OSP0CZ25 163 aa13.24□□□□□ -0.29
CTDSP2-204ENST00000548823 SERTAD4-AS1Q5TG53 156 aa13.23□□□□□ -0.29
CTDSP2-204ENST00000548823 LYRM7Q5U5X0 104 aa13.23□□□□□ -0.29
CTDSP2-204ENST00000548823 UBE2WQ96B02 151 aa13.23□□□□□ -0.29
CTDSP2-204ENST00000548823 CFAP161Q6P656 301 aa13.22□□□□□ -0.29
CTDSP2-204ENST00000548823 DAND5Q8N907 189 aa13.21□□□□□ -0.29
CTDSP2-204ENST00000548823 ERG28Q9UKR5 140 aa13.21□□□□□ -0.29
CTDSP2-204ENST00000548823 FUSP35637 526 aaKnown RBP eCLIP13.2□□□□□ -0.36e-6■■■□□ 17.6
CTDSP2-204ENST00000548823 CKS1BP61024 79 aa13.2□□□□□ -0.3
CTDSP2-204ENST00000548823 KRTAP26-1Q6PEX3 210 aa13.2□□□□□ -0.3
CTDSP2-204ENST00000548823 HMCN2Q8NDA2 5059 aa13.2□□□□□ -0.3
CTDSP2-204ENST00000548823 COX17Q14061 63 aa13.2□□□□□ -0.3
CTDSP2-204ENST00000548823 SOSTDC1Q6X4U4 206 aa13.2□□□□□ -0.3
CTDSP2-204ENST00000548823 UPK3BQ9BT76 320 aa13.2□□□□□ -0.3
CTDSP2-204ENST00000548823 LINC00158P58513 81 aa13.19□□□□□ -0.3
CTDSP2-204ENST00000548823 MIR7-3HGQ8N6C7 128 aa13.19□□□□□ -0.3
CTDSP2-204ENST00000548823 A0A0U1RRA0 63 aa13.18□□□□□ -0.3
CTDSP2-204ENST00000548823 KRTAP10-1P60331 282 aa13.18□□□□□ -0.3
CTDSP2-204ENST00000548823 NPC2P61916 151 aa13.18□□□□□ -0.3
CTDSP2-204ENST00000548823 LOC107984156A0A0G2JMH3 177 aa13.17□□□□□ -0.3
CTDSP2-204ENST00000548823 KRTAP29-1A8MX34 341 aaPredicted RBP13.17□□□□□ -0.3
CTDSP2-204ENST00000548823 Q6ZRN7 208 aaPredicted RBP13.17□□□□□ -0.3
CTDSP2-204ENST00000548823 ARL17AQ8IVW1 177 aa13.17□□□□□ -0.3
CTDSP2-204ENST00000548823 TRBV30A0A0K0K1B3 111 aa13.16□□□□□ -0.3
CTDSP2-204ENST00000548823 SPAG11BQ08648 103 aa13.16□□□□□ -0.3
CTDSP2-204ENST00000548823 TRBV20-1A0A075B6N2 111 aa13.15□□□□□ -0.3
CTDSP2-204ENST00000548823 C2orf82Q6UX34 121 aa13.15□□□□□ -0.3
CTDSP2-204ENST00000548823 C1orf43Q9BWL3 253 aa13.14□□□□□ -0.31
CTDSP2-204ENST00000548823 GVQW2A0A096LPI5 108 aaPredicted RBP13.13□□□□□ -0.31
CTDSP2-204ENST00000548823 F8WDY8 70 aa13.12□□□□□ -0.31
CTDSP2-204ENST00000548823 PFN2P35080 140 aa13.12□□□□□ -0.31
CTDSP2-204ENST00000548823 NTN5Q8WTR8 489 aaPredicted RBP13.11□□□□□ -0.31
CTDSP2-204ENST00000548823 Q1RN00 199 aa13.1□□□□□ -0.31
CTDSP2-204ENST00000548823 SND1-IT1Q9HBX3 110 aa13.1□□□□□ -0.31
CTDSP2-204ENST00000548823 TRAV13-2A0A0B4J235 113 aa13.09□□□□□ -0.31
CTDSP2-204ENST00000548823 RPL13AP40429 203 aaKnown RBP13.09□□□□□ -0.31
CTDSP2-204ENST00000548823 PSMB2P49721 201 aa13.09□□□□□ -0.31
CTDSP2-204ENST00000548823 C2orf48Q96LS8 159 aa13.08□□□□□ -0.31
CTDSP2-204ENST00000548823 F8W1H4 67 aa13.07□□□□□ -0.32
CTDSP2-204ENST00000548823 COX6CP09669 75 aa13.07□□□□□ -0.32
CTDSP2-204ENST00000548823 SCGB1C2P0DMR2 95 aa13.07□□□□□ -0.32
CTDSP2-204ENST00000548823 RMI2Q96E14 147 aa13.07□□□□□ -0.32
CTDSP2-204ENST00000548823 PLA2G2DQ9UNK4 145 aa13.07□□□□□ -0.32
CTDSP2-204ENST00000548823 H7C2G1 150 aa13.07□□□□□ -0.32
CTDSP2-204ENST00000548823 UNQ6190/PRO20217Q6UXQ8 127 aa13.07□□□□□ -0.32
CTDSP2-204ENST00000548823 IGKV2D-24A0A075B6R9 120 aa13.06□□□□□ -0.32
CTDSP2-204ENST00000548823 H3BMG7 143 aa13.06□□□□□ -0.32
CTDSP2-204ENST00000548823 NDUFC2O95298 119 aa13.06□□□□□ -0.32
CTDSP2-204ENST00000548823 HAMPP81172 84 aa13.06□□□□□ -0.32
CTDSP2-204ENST00000548823 C15orf56Q8N910 161 aa13.06□□□□□ -0.32
CTDSP2-204ENST00000548823 ZNF561-AS1K7EIQ3 104 aa13.05□□□□□ -0.32
CTDSP2-204ENST00000548823 TRIAP1O43715 76 aa13.05□□□□□ -0.32
CTDSP2-204ENST00000548823 TCL1BO95988 128 aa13.05□□□□□ -0.32
CTDSP2-204ENST00000548823 IGKV2-28A0A075B6P5 120 aa13.04□□□□□ -0.32
CTDSP2-204ENST00000548823 A0A087WTM6 91 aa13.04□□□□□ -0.32
CTDSP2-204ENST00000548823 IGKV2D-28P01615 120 aa13.04□□□□□ -0.32
CTDSP2-204ENST00000548823 C10orf25Q5T742 122 aa13.04□□□□□ -0.32
CTDSP2-204ENST00000548823 PRO0461Q9UI25 63 aa13.03□□□□□ -0.32
CTDSP2-204ENST00000548823 LINC00337Q8N6G1 96 aa13.01□□□□□ -0.33
CTDSP2-204ENST00000548823 PLA2G1BP04054 148 aaKnown RBP13□□□□□ -0.33
CTDSP2-204ENST00000548823 ATXN8Q156A1 80 aa13□□□□□ -0.33
CTDSP2-204ENST00000548823 C9orf116Q5BN46 136 aaPredicted RBP13□□□□□ -0.33
CTDSP2-204ENST00000548823 CAMK2N2Q96S95 79 aa13□□□□□ -0.33
CTDSP2-204ENST00000548823 C6orf48Q9UBA6 75 aa13□□□□□ -0.33
CTDSP2-204ENST00000548823 RPL28P46779 137 aaKnown RBP12.99□□□□□ -0.33
CTDSP2-204ENST00000548823 LINC00526Q96FQ7 95 aa12.99□□□□□ -0.33
CTDSP2-204ENST00000548823 Q9HAA7 133 aa12.99□□□□□ -0.33
CTDSP2-204ENST00000548823 HIGD2BQ4VC39 106 aa12.97□□□□□ -0.33
CTDSP2-204ENST00000548823 M0QXV9 152 aa12.96□□□□□ -0.33
CTDSP2-204ENST00000548823 LINC01600Q96MT4 127 aa12.96□□□□□ -0.33
CTDSP2-204ENST00000548823 RNF151Q2KHN1 245 aa12.95□□□□□ -0.34
CTDSP2-204ENST00000548823 LST1O00453 97 aa12.94□□□□□ -0.34
CTDSP2-204ENST00000548823 WFDC2Q14508 124 aa12.94□□□□□ -0.34
CTDSP2-204ENST00000548823 LRP1Q07954 4544 aaKnown RBP12.94□□□□□ -0.34
CTDSP2-204ENST00000548823 LINC01620Q4KN68 170 aa12.94□□□□□ -0.34
CTDSP2-204ENST00000548823 Q6ZRU5 148 aa12.94□□□□□ -0.34
CTDSP2-204ENST00000548823 SYCNQ0VAF6 134 aa12.93□□□□□ -0.34
CTDSP2-204ENST00000548823 TRBV10-2A0A0K0K1G8 114 aa12.92□□□□□ -0.34
CTDSP2-204ENST00000548823 SMCPP49901 116 aaPredicted RBP12.92□□□□□ -0.34
CTDSP2-204ENST00000548823 IGLV5-52A0A0A0MRZ9 124 aa12.91□□□□□ -0.34
CTDSP2-204ENST00000548823 NDUFC2-KCTD14E9PQ53 114 aa12.91□□□□□ -0.34
CTDSP2-204ENST00000548823 OXTP01178 125 aa12.91□□□□□ -0.34
CTDSP2-204ENST00000548823 OCIAD2Q56VL3 154 aa12.91□□□□□ -0.34
CTDSP2-204ENST00000548823 SMIM11BQ8TCY0 68 aa12.91□□□□□ -0.34
CTDSP2-204ENST00000548823 TMEM126AQ9H061 195 aa12.91□□□□□ -0.34
CTDSP2-204ENST00000548823 USP17L23D6RBM5 183 aa12.9□□□□□ -0.34
CTDSP2-204ENST00000548823 H0YGX0 51 aa12.9□□□□□ -0.34
CTDSP2-204ENST00000548823 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
CTDSP2-204ENST00000548823 OR13C6PQ8NH95 151 aa12.89□□□□□ -0.35
CTDSP2-204ENST00000548823 CLEC2BQ92478 149 aa12.89□□□□□ -0.35
CTDSP2-204ENST00000548823 FAM30AQ9NZY2 134 aa12.89□□□□□ -0.35
CTDSP2-204ENST00000548823 C9JAW5 83 aa12.88□□□□□ -0.35
CTDSP2-204ENST00000548823 K7ERU9 68 aa12.88□□□□□ -0.35
CTDSP2-204ENST00000548823 SLC25A20O43772 301 aa12.88□□□□□ -0.35
CTDSP2-204ENST00000548823 TRACP01848 142 aa12.88□□□□□ -0.35
CTDSP2-204ENST00000548823 LINC00528Q8N1L1 170 aa12.88□□□□□ -0.35
CTDSP2-204ENST00000548823 CARD19Q96LW7 228 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms