RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PFN2P35080 140 aa3.99□□□□□ -1.77
SCAF11-211ENST00000547950 KRTAP15-1Q3LI76 137 aa3.99□□□□□ -1.77
SCAF11-211ENST00000547950 CARHSP1Q9Y2V2 147 aaKnown RBP3.99□□□□□ -1.77
SCAF11-211ENST00000547950 TRAPPC1Q9Y5R8 145 aa3.99□□□□□ -1.77
SCAF11-211ENST00000547950 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
SCAF11-211ENST00000547950 SCO1O75880 301 aa3.98□□□□□ -1.77
SCAF11-211ENST00000547950 LINC00614P0C842 121 aa3.98□□□□□ -1.77
SCAF11-211ENST00000547950 IGLC3P0DOY3 106 aa3.98□□□□□ -1.77
SCAF11-211ENST00000547950 RHEBQ15382 184 aa3.98□□□□□ -1.77
SCAF11-211ENST00000547950 PMCHL1Q16048 86 aa3.98□□□□□ -1.77
SCAF11-211ENST00000547950 C10orf91Q5T1B1 145 aa3.98□□□□□ -1.77
SCAF11-211ENST00000547950 NKAPP1Q8N9T2 125 aa3.98□□□□□ -1.77
SCAF11-211ENST00000547950 ZNF625Q96I27 306 aaPredicted RBP3.98□□□□□ -1.77
SCAF11-211ENST00000547950 ANAPC11Q9NYG5 84 aa3.98□□□□□ -1.77
SCAF11-211ENST00000547950 IGKV2-28A0A075B6P5 120 aa3.97□□□□□ -1.77
SCAF11-211ENST00000547950 A0A087X002 238 aa3.97□□□□□ -1.77
SCAF11-211ENST00000547950 A0A096LNJ9 63 aa3.97□□□□□ -1.77
SCAF11-211ENST00000547950 IGKV2D-28P01615 120 aa3.97□□□□□ -1.77
SCAF11-211ENST00000547950 CRYGAP11844 174 aa3.97□□□□□ -1.77
SCAF11-211ENST00000547950 UBE2AP49459 152 aa3.97□□□□□ -1.77
SCAF11-211ENST00000547950 BAGE3Q86Y29 109 aa3.97□□□□□ -1.77
SCAF11-211ENST00000547950 C18orf32Q8TCD1 76 aa3.97□□□□□ -1.77
SCAF11-211ENST00000547950 URB1-AS1Q96HZ7 61 aa3.97□□□□□ -1.77
SCAF11-211ENST00000547950 IGLV5-37A0A075B6J1 123 aa3.96□□□□□ -1.78
SCAF11-211ENST00000547950 IGLV5-39A0A0G2JS06 123 aa3.96□□□□□ -1.78
SCAF11-211ENST00000547950 HBDP02042 147 aa3.96□□□□□ -1.78
SCAF11-211ENST00000547950 APOC3P02656 99 aa3.96□□□□□ -1.78
SCAF11-211ENST00000547950 ZNF22P17026 224 aaPredicted RBP3.96□□□□□ -1.78
SCAF11-211ENST00000547950 TMEM170BQ5T4T1 132 aa3.96□□□□□ -1.78
SCAF11-211ENST00000547950 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
SCAF11-211ENST00000547950 SND1-IT1Q9HBX3 110 aa3.96□□□□□ -1.78
SCAF11-211ENST00000547950 ERG28Q9UKR5 140 aa3.96□□□□□ -1.78
SCAF11-211ENST00000547950 TMEM238C9JI98 176 aa3.95□□□□□ -1.78
SCAF11-211ENST00000547950 RPL24P83731 157 aaKnown RBP3.95□□□□□ -1.78
SCAF11-211ENST00000547950 A0A0U1RRA0 63 aa3.94□□□□□ -1.78
SCAF11-211ENST00000547950 C11orf86A6NJI1 115 aa3.94□□□□□ -1.78
SCAF11-211ENST00000547950 VPREB1P12018 145 aa3.94□□□□□ -1.78
SCAF11-211ENST00000547950 LINC00158P58513 81 aa3.94□□□□□ -1.78
SCAF11-211ENST00000547950 PRLHP81277 87 aa3.94□□□□□ -1.78
SCAF11-211ENST00000547950 COX17Q14061 63 aa3.94□□□□□ -1.78
SCAF11-211ENST00000547950 FAM19A1Q7Z5A9 133 aa3.94□□□□□ -1.78
SCAF11-211ENST00000547950 CHTOPQ9Y3Y2 248 aaKnown RBP3.94□□□□□ -1.78
SCAF11-211ENST00000547950 LPAP08519 4548 aa3.94□□□□□ -1.78
SCAF11-211ENST00000547950 SNAPINO95295 136 aa3.93□□□□□ -1.78
SCAF11-211ENST00000547950 NDUFA5Q16718 116 aa3.93□□□□□ -1.78
SCAF11-211ENST00000547950 KRTAP13-2Q52LG2 175 aa3.93□□□□□ -1.78
SCAF11-211ENST00000547950 KRTAP13-1Q8IUC0 172 aa3.93□□□□□ -1.78
SCAF11-211ENST00000547950 SVBPQ8N300 66 aa3.93□□□□□ -1.78
SCAF11-211ENST00000547950 TMEM126AQ9H061 195 aa3.93□□□□□ -1.78
SCAF11-211ENST00000547950 IGKV2D-26A0A0A0MRZ7 120 aa3.92□□□□□ -1.78
SCAF11-211ENST00000547950 M0R378 163 aa3.92□□□□□ -1.78
SCAF11-211ENST00000547950 ATP6V1G1O75348 118 aa3.92□□□□□ -1.78
SCAF11-211ENST00000547950 FAM229BQ4G0N7 80 aa3.92□□□□□ -1.78
SCAF11-211ENST00000547950 SFTA2Q6UW10 78 aa3.92□□□□□ -1.78
SCAF11-211ENST00000547950 Q8NDZ9 215 aa3.92□□□□□ -1.78
SCAF11-211ENST00000547950 IFI27L1Q96BM0 104 aa3.92□□□□□ -1.78
SCAF11-211ENST00000547950 TMEM223A0PJW6 202 aa3.91□□□□□ -1.78
SCAF11-211ENST00000547950 CBLN2Q8IUK8 224 aa3.91□□□□□ -1.78
SCAF11-211ENST00000547950 LINC00304Q8N9R0 145 aa3.91□□□□□ -1.78
SCAF11-211ENST00000547950 CHCHD1Q96BP2 118 aaKnown RBP3.91□□□□□ -1.78
SCAF11-211ENST00000547950 PLEKHB2Q96CS7 222 aa3.91□□□□□ -1.78
SCAF11-211ENST00000547950 RETNLBQ9BQ08 111 aa3.91□□□□□ -1.78
SCAF11-211ENST00000547950 HIGD2AQ9BW72 106 aa3.91□□□□□ -1.78
SCAF11-211ENST00000547950 TRAV12-1A0A0B4J245 112 aa3.9□□□□□ -1.79
SCAF11-211ENST00000547950 H0Y8G0 127 aa3.9□□□□□ -1.79
SCAF11-211ENST00000547950 SMIM13P0DJ93 91 aa3.9□□□□□ -1.79
SCAF11-211ENST00000547950 MEIG1Q5JSS6 88 aa3.9□□□□□ -1.79
SCAF11-211ENST00000547950 FAM19A2Q8N3H0 131 aa3.9□□□□□ -1.79
SCAF11-211ENST00000547950 HSBP1O75506 76 aa3.89□□□□□ -1.79
SCAF11-211ENST00000547950 BOD1L2Q8IYS8 172 aa3.89□□□□□ -1.79
SCAF11-211ENST00000547950 C3orf22Q8N5N4 141 aa3.89□□□□□ -1.79
SCAF11-211ENST00000547950 YPEL4Q96NS1 127 aa3.89□□□□□ -1.79
SCAF11-211ENST00000547950 NCR3O14931 201 aa3.88□□□□□ -1.79
SCAF11-211ENST00000547950 MIR7-3HGQ8N6C7 128 aa3.88□□□□□ -1.79
SCAF11-211ENST00000547950 NDUFA12Q9UI09 145 aa3.88□□□□□ -1.79
SCAF11-211ENST00000547950 IGLV7-46A0A075B6I9 117 aa3.87□□□□□ -1.79
SCAF11-211ENST00000547950 MYMXA0A1B0GTQ4 84 aa3.87□□□□□ -1.79
SCAF11-211ENST00000547950 LINC00587B1AMM8 73 aa3.87□□□□□ -1.79
SCAF11-211ENST00000547950 TRGC2P03986 189 aa3.87□□□□□ -1.79
SCAF11-211ENST00000547950 FABP4P15090 132 aa3.87□□□□□ -1.79
SCAF11-211ENST00000547950 HERV-K104P63124 156 aa3.87□□□□□ -1.79
SCAF11-211ENST00000547950 SMCR5Q8TEV8 140 aa3.87□□□□□ -1.79
SCAF11-211ENST00000547950 SPRR4Q96PI1 79 aa3.87□□□□□ -1.79
SCAF11-211ENST00000547950 MAP1LC3CQ9BXW4 147 aa3.87□□□□□ -1.79
SCAF11-211ENST00000547950 PPDPFQ9H3Y8 114 aa3.87□□□□□ -1.79
SCAF11-211ENST00000547950 ETDCA0A1B0GVM5 59 aa3.86□□□□□ -1.79
SCAF11-211ENST00000547950 LEPROTL1O95214 131 aa3.86□□□□□ -1.79
SCAF11-211ENST00000547950 DAND5Q8N907 189 aa3.86□□□□□ -1.79
SCAF11-211ENST00000547950 ZNF706Q9Y5V0 76 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-211ENST00000547950 MUC2Q02817 5179 aa3.85□□□□□ -1.79
SCAF11-211ENST00000547950 TRBV10-3A0A0K0K1G6 114 aa3.85□□□□□ -1.79
SCAF11-211ENST00000547950 PRYO14603 147 aa3.85□□□□□ -1.79
SCAF11-211ENST00000547950 LEPROTO15243 131 aa3.85□□□□□ -1.79
SCAF11-211ENST00000547950 SERF1AO75920 110 aa3.85□□□□□ -1.79
SCAF11-211ENST00000547950 TSPEAR-AS2P59090 65 aa3.85□□□□□ -1.79
SCAF11-211ENST00000547950 S100A12P80511 92 aa3.85□□□□□ -1.79
SCAF11-211ENST00000547950 SPAG11AQ6PDA7 123 aa3.85□□□□□ -1.79
SCAF11-211ENST00000547950 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
SCAF11-211ENST00000547950 KCNQ1DNQ9H478 68 aa3.85□□□□□ -1.79
SCAF11-211ENST00000547950 A0A0U1RQV1 116 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms