RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 IGKV2-28A0A075B6P5 120 aa11.13□□□□□ -0.63
CHMP1A-204ENST00000547687 TRBV10-2A0A0K0K1G8 114 aa11.13□□□□□ -0.63
CHMP1A-204ENST00000547687 LST1O00453 97 aa11.13□□□□□ -0.63
CHMP1A-204ENST00000547687 IGKV2D-28P01615 120 aa11.13□□□□□ -0.63
CHMP1A-204ENST00000547687 CRPP02741 224 aa11.13□□□□□ -0.63
CHMP1A-204ENST00000547687 ANKRD29Q8N6D5 301 aa11.13□□□□□ -0.63
CHMP1A-204ENST00000547687 DNAH6Q9C0G6 4158 aa11.12□□□□□ -0.63
CHMP1A-204ENST00000547687 LINC00337Q8N6G1 96 aa11.11□□□□□ -0.63
CHMP1A-204ENST00000547687 PPDPFLQ8WWR9 84 aa11.11□□□□□ -0.63
CHMP1A-204ENST00000547687 CARD19Q96LW7 228 aa11.11□□□□□ -0.63
CHMP1A-204ENST00000547687 DNAH10Q8IVF4 4471 aa11.1□□□□□ -0.63
CHMP1A-204ENST00000547687 UBE2WQ96B02 151 aa11.1□□□□□ -0.63
CHMP1A-204ENST00000547687 LINC01600Q96MT4 127 aa11.1□□□□□ -0.63
CHMP1A-204ENST00000547687 COX17Q14061 63 aa11.09□□□□□ -0.63
CHMP1A-204ENST00000547687 TRAV8-4A0A0B4J246 113 aa11.09□□□□□ -0.63
CHMP1A-204ENST00000547687 RPL28P46779 137 aaKnown RBP11.08□□□□□ -0.64
CHMP1A-204ENST00000547687 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
CHMP1A-204ENST00000547687 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
CHMP1A-204ENST00000547687 C6orf223Q8N319 242 aa11.06□□□□□ -0.64
CHMP1A-204ENST00000547687 DNAH2Q9P225 4427 aa11.06□□□□□ -0.64
CHMP1A-204ENST00000547687 H3BT86 120 aa11.06□□□□□ -0.64
CHMP1A-204ENST00000547687 C9orf116Q5BN46 136 aaPredicted RBP11.06□□□□□ -0.64
CHMP1A-204ENST00000547687 BIRC6Q9NR09 4857 aa11.05□□□□□ -0.64
CHMP1A-204ENST00000547687 NTN5Q8WTR8 489 aaPredicted RBP11.05□□□□□ -0.64
CHMP1A-204ENST00000547687 LINC01556Q5JQF7 62 aa11.04□□□□□ -0.64
CHMP1A-204ENST00000547687 UNQ6190/PRO20217Q6UXQ8 127 aa11.04□□□□□ -0.64
CHMP1A-204ENST00000547687 SMIM11BQ8TCY0 68 aa11.04□□□□□ -0.64
CHMP1A-204ENST00000547687 C10orf25Q5T742 122 aa11.04□□□□□ -0.64
CHMP1A-204ENST00000547687 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
CHMP1A-204ENST00000547687 LINC00526Q96FQ7 95 aa11.04□□□□□ -0.64
CHMP1A-204ENST00000547687 TRACP01848 142 aa11.01□□□□□ -0.65
CHMP1A-204ENST00000547687 DNAH10OSP0CZ25 163 aa11.01□□□□□ -0.65
CHMP1A-204ENST00000547687 SMIM20Q8N5G0 67 aa11.01□□□□□ -0.65
CHMP1A-204ENST00000547687 NDUFC2O95298 119 aa11.01□□□□□ -0.65
CHMP1A-204ENST00000547687 FAM218AQ96MZ4 157 aa11.01□□□□□ -0.65
CHMP1A-204ENST00000547687 KRTAP26-1Q6PEX3 210 aa11□□□□□ -0.65
CHMP1A-204ENST00000547687 TEX49A0A1B0GTD5 131 aa10.99□□□□□ -0.65
CHMP1A-204ENST00000547687 PRR3P79522 188 aaKnown RBP10.99□□□□□ -0.65
CHMP1A-204ENST00000547687 HECTD4Q9Y4D8 3996 aa10.99□□□□□ -0.65
CHMP1A-204ENST00000547687 H0YGX0 51 aa10.98□□□□□ -0.65
CHMP1A-204ENST00000547687 ANAPC13Q9BS18 74 aa10.98□□□□□ -0.65
CHMP1A-204ENST00000547687 FAT2Q9NYQ8 4349 aa10.98□□□□□ -0.65
CHMP1A-204ENST00000547687 GVQW2A0A096LPI5 108 aaPredicted RBP10.97□□□□□ -0.65
CHMP1A-204ENST00000547687 B5MCH6 92 aa10.97□□□□□ -0.65
CHMP1A-204ENST00000547687 M0R2N4 97 aa10.97□□□□□ -0.65
CHMP1A-204ENST00000547687 UPK3BQ9BT76 320 aa10.97□□□□□ -0.65
CHMP1A-204ENST00000547687 CDIP1Q9H305 208 aa10.97□□□□□ -0.65
CHMP1A-204ENST00000547687 ZNF561-AS1K7EIQ3 104 aa10.96□□□□□ -0.65
CHMP1A-204ENST00000547687 UBE2DNLQ8IWF7 75 aa10.96□□□□□ -0.65
CHMP1A-204ENST00000547687 C5orf47Q569G3 176 aa10.96□□□□□ -0.66
CHMP1A-204ENST00000547687 C1orf43Q9BWL3 253 aa10.96□□□□□ -0.66
CHMP1A-204ENST00000547687 C6orf48Q9UBA6 75 aa10.96□□□□□ -0.66
CHMP1A-204ENST00000547687 BAALC-AS2P0C853 105 aa10.95□□□□□ -0.66
CHMP1A-204ENST00000547687 HIGD2BQ4VC39 106 aa10.95□□□□□ -0.66
CHMP1A-204ENST00000547687 TMEM126AQ9H061 195 aa10.94□□□□□ -0.66
CHMP1A-204ENST00000547687 A0A087WYN8 130 aa10.94□□□□□ -0.66
CHMP1A-204ENST00000547687 Q8NDZ9 215 aa10.94□□□□□ -0.66
CHMP1A-204ENST00000547687 Q9HAA7 133 aa10.94□□□□□ -0.66
CHMP1A-204ENST00000547687 IGKV2D-24A0A075B6R9 120 aa10.93□□□□□ -0.66
CHMP1A-204ENST00000547687 CAMK2N2Q96S95 79 aa10.93□□□□□ -0.66
CHMP1A-204ENST00000547687 DNAH17Q9UFH2 4485 aa10.93□□□□□ -0.66
CHMP1A-204ENST00000547687 NCR3O14931 201 aa10.92□□□□□ -0.66
CHMP1A-204ENST00000547687 C15orf56Q8N910 161 aa10.92□□□□□ -0.66
CHMP1A-204ENST00000547687 PKHD1P08F94 4074 aa10.92□□□□□ -0.66
CHMP1A-204ENST00000547687 DNAL4O96015 105 aa10.91□□□□□ -0.66
CHMP1A-204ENST00000547687 MT-ATP8P03928 68 aa10.91□□□□□ -0.66
CHMP1A-204ENST00000547687 S100A7L2Q5SY68 101 aa10.9□□□□□ -0.66
CHMP1A-204ENST00000547687 C2orf48Q96LS8 159 aa10.9□□□□□ -0.66
CHMP1A-204ENST00000547687 LECT2O14960 151 aa10.89□□□□□ -0.67
CHMP1A-204ENST00000547687 Q6ZRU5 148 aa10.89□□□□□ -0.67
CHMP1A-204ENST00000547687 PKD1P98161 4303 aa10.88□□□□□ -0.67
CHMP1A-204ENST00000547687 C22orf24Q9Y442 160 aa10.88□□□□□ -0.67
CHMP1A-204ENST00000547687 XGP55808 180 aa10.87□□□□□ -0.67
CHMP1A-204ENST00000547687 XAGE1AQ9HD64 81 aa10.87□□□□□ -0.67
CHMP1A-204ENST00000547687 F8WDY8 70 aa10.85□□□□□ -0.67
CHMP1A-204ENST00000547687 RPL18AQ02543 176 aaKnown RBP10.85□□□□□ -0.67
CHMP1A-204ENST00000547687 KRTAP1-5Q9BYS1 174 aa10.85□□□□□ -0.67
CHMP1A-204ENST00000547687 RTL8CO15255 209 aa10.84□□□□□ -0.67
CHMP1A-204ENST00000547687 IGLV6-57P01721 117 aa10.84□□□□□ -0.67
CHMP1A-204ENST00000547687 C6orf99Q4VX62 202 aa10.84□□□□□ -0.67
CHMP1A-204ENST00000547687 Q6ZR54 194 aa10.84□□□□□ -0.67
CHMP1A-204ENST00000547687 A0A1B0GX51 115 aa10.83□□□□□ -0.68
CHMP1A-204ENST00000547687 SLPIP03973 132 aa10.83□□□□□ -0.68
CHMP1A-204ENST00000547687 NDUFC2-KCTD14E9PQ53 114 aa10.82□□□□□ -0.68
CHMP1A-204ENST00000547687 SYCNQ0VAF6 134 aa10.82□□□□□ -0.68
CHMP1A-204ENST00000547687 Q8N814 137 aa10.82□□□□□ -0.68
CHMP1A-204ENST00000547687 RMI2Q96E14 147 aa10.81□□□□□ -0.68
CHMP1A-204ENST00000547687 ORMDL1Q9P0S3 153 aa10.81□□□□□ -0.68
CHMP1A-204ENST00000547687 FAM240AA0A1B0GVK7 77 aa10.8□□□□□ -0.68
CHMP1A-204ENST00000547687 NDUFV3P56181 108 aaKnown RBP10.8□□□□□ -0.68
CHMP1A-204ENST00000547687 LINC00167Q96N53 147 aa10.8□□□□□ -0.68
CHMP1A-204ENST00000547687 Q6Q795 121 aa10.8□□□□□ -0.68
CHMP1A-204ENST00000547687 INAFM2P0DMQ5 153 aa10.79□□□□□ -0.68
CHMP1A-204ENST00000547687 GAGE2EQ4V326 116 aa10.79□□□□□ -0.68
CHMP1A-204ENST00000547687 GAGE2DQ9UEU5 116 aa10.79□□□□□ -0.68
CHMP1A-204ENST00000547687 TRBV10-3A0A0K0K1G6 114 aa10.79□□□□□ -0.68
CHMP1A-204ENST00000547687 CCDC179H3BU77 68 aa10.79□□□□□ -0.68
CHMP1A-204ENST00000547687 SNCGO76070 127 aa10.79□□□□□ -0.68
CHMP1A-204ENST00000547687 VPREB1P12018 145 aa10.79□□□□□ -0.68
CHMP1A-204ENST00000547687 DNAH11Q96DT5 4516 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms