RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	LINC00472	Q9H8W2	130 aa		1.92	□□□□□ -2.1
LGR5-204	ENST00000547310	SPAG17	Q6Q759	2223 aa		1.92	□□□□□ -2.1
LGR5-204	ENST00000547310	RP1	P56715	2156 aa		1.91	□□□□□ -2.1
LGR5-204	ENST00000547310	ARFGEF3	Q5TH69	2177 aa		1.91	□□□□□ -2.1
LGR5-204	ENST00000547310	TRGV1	A0A0A0MS02	117 aa		1.91	□□□□□ -2.1
LGR5-204	ENST00000547310	FXYD4	P59646	89 aa		1.91	□□□□□ -2.1
LGR5-204	ENST00000547310	GAFA1	Q96PS6	74 aa		1.91	□□□□□ -2.1
LGR5-204	ENST00000547310	PRRC2B	Q5JSZ5	2229 aa	Known RBP	1.91	□□□□□ -2.1
LGR5-204	ENST00000547310	KIF21B	O75037	1637 aa		1.91	□□□□□ -2.1
LGR5-204	ENST00000547310	TULP4	Q9NRJ4	1543 aa		1.91	□□□□□ -2.1
LGR5-204	ENST00000547310	TRGV2	A0A075B6R0	118 aa		1.9	□□□□□ -2.11
LGR5-204	ENST00000547310	DEFB114	Q30KQ6	69 aa		1.9	□□□□□ -2.11
LGR5-204	ENST00000547310	DEFB112	Q30KQ8	113 aa		1.9	□□□□□ -2.11
LGR5-204	ENST00000547310	ZNF625	Q96I27	306 aa	Predicted RBP	1.9	□□□□□ -2.11
LGR5-204	ENST00000547310	DEPDC5	O75140	1603 aa		1.9	□□□□□ -2.11
LGR5-204	ENST00000547310	CLTCL1	P53675	1640 aa		1.9	□□□□□ -2.11
LGR5-204	ENST00000547310	SAMD9L	Q8IVG5	1584 aa		1.89	□□□□□ -2.11
LGR5-204	ENST00000547310	LRRC37A2	A6NM11	1700 aa		1.89	□□□□□ -2.11
LGR5-204	ENST00000547310		K7EMI3	77 aa		1.89	□□□□□ -2.11
LGR5-204	ENST00000547310	ACYP2	P14621	99 aa		1.89	□□□□□ -2.11
LGR5-204	ENST00000547310	SNRPG	P62308	76 aa	Known RBP	1.89	□□□□□ -2.11
LGR5-204	ENST00000547310	INTS1	Q8N201	2190 aa	Known RBP	1.88	□□□□□ -2.11
LGR5-204	ENST00000547310	LINC01546	A6NGU7	62 aa		1.88	□□□□□ -2.11
LGR5-204	ENST00000547310	CAV3	P56539	151 aa		1.88	□□□□□ -2.11
LGR5-204	ENST00000547310	COA5	Q86WW8	74 aa		1.88	□□□□□ -2.11
LGR5-204	ENST00000547310	UNC13C	Q8NB66	2214 aa		1.88	□□□□□ -2.11
LGR5-204	ENST00000547310	DDX60	Q8IY21	1712 aa	Known RBP	1.88	□□□□□ -2.11
LGR5-204	ENST00000547310	DNAJC13	O75165	2243 aa		1.87	□□□□□ -2.11
LGR5-204	ENST00000547310	IGIP	A6NJ69	53 aa		1.87	□□□□□ -2.11
LGR5-204	ENST00000547310	NDUFA4	O00483	81 aa		1.87	□□□□□ -2.11
LGR5-204	ENST00000547310	COX6B1	P14854	86 aa		1.87	□□□□□ -2.11
LGR5-204	ENST00000547310		Q6ZQY7	126 aa		1.87	□□□□□ -2.11
LGR5-204	ENST00000547310	NCOA6	Q14686	2063 aa	Predicted RBP	1.87	□□□□□ -2.11
LGR5-204	ENST00000547310	ABCA4	P78363	2273 aa		1.87	□□□□□ -2.11
LGR5-204	ENST00000547310		A0A1B0GU69	56 aa		1.86	□□□□□ -2.11
LGR5-204	ENST00000547310	LINC00959	A0A1B0GUT2	108 aa		1.86	□□□□□ -2.11
LGR5-204	ENST00000547310		M0R1W7	72 aa		1.86	□□□□□ -2.11
LGR5-204	ENST00000547310	NCR3	O14931	201 aa		1.86	□□□□□ -2.11
LGR5-204	ENST00000547310	BRWD1	Q9NSI6	2320 aa		1.85	□□□□□ -2.11
LGR5-204	ENST00000547310	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	1.85	□□□□□ -2.11
LGR5-204	ENST00000547310		I3L3M4	83 aa		1.85	□□□□□ -2.11
LGR5-204	ENST00000547310	COX7B	P24311	80 aa		1.85	□□□□□ -2.11
LGR5-204	ENST00000547310	C10orf99	Q6UWK7	81 aa		1.85	□□□□□ -2.11
LGR5-204	ENST00000547310	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		1.85	□□□□□ -2.11
LGR5-204	ENST00000547310		E9PCH4	1651 aa		1.85	□□□□□ -2.11
LGR5-204	ENST00000547310	KMT2B	Q9UMN6	2715 aa	Predicted RBP	1.85	□□□□□ -2.11
LGR5-204	ENST00000547310	DOCK10	Q96BY6	2186 aa		1.85	□□□□□ -2.11
LGR5-204	ENST00000547310	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	1.84	□□□□□ -2.11
LGR5-204	ENST00000547310		A0A0G2JMZ2	1700 aa		1.84	□□□□□ -2.11
LGR5-204	ENST00000547310	ARL14EPL	P0DKL9	152 aa		1.84	□□□□□ -2.11
LGR5-204	ENST00000547310	CCL19	Q99731	98 aa		1.84	□□□□□ -2.11
LGR5-204	ENST00000547310	KCNQ1DN	Q9H478	68 aa		1.84	□□□□□ -2.11
LGR5-204	ENST00000547310	DUOX1	Q9NRD9	1551 aa		1.84	□□□□□ -2.12
LGR5-204	ENST00000547310	C4A	P0C0L4	1744 aa		1.83	□□□□□ -2.12
LGR5-204	ENST00000547310	RPL38	P63173	70 aa	Known RBP	1.83	□□□□□ -2.12
LGR5-204	ENST00000547310		Q6ZRN7	208 aa	Predicted RBP	1.82	□□□□□ -2.12
LGR5-204	ENST00000547310	SMIM11B	Q8TCY0	68 aa		1.82	□□□□□ -2.12
LGR5-204	ENST00000547310	LRRC37A	A6NMS7	1700 aa		1.82	□□□□□ -2.12
LGR5-204	ENST00000547310	GCC2	Q8IWJ2	1684 aa		1.81	□□□□□ -2.12
LGR5-204	ENST00000547310	ALPK2	Q86TB3	2170 aa		1.81	□□□□□ -2.12
LGR5-204	ENST00000547310	TOGARAM1	Q9Y4F4	1720 aa		1.81	□□□□□ -2.12
LGR5-204	ENST00000547310	SDK1	Q7Z5N4	2213 aa		1.81	□□□□□ -2.12
LGR5-204	ENST00000547310	ETDC	A0A1B0GVM5	59 aa		1.81	□□□□□ -2.12
LGR5-204	ENST00000547310		H0YGX0	51 aa		1.81	□□□□□ -2.12
LGR5-204	ENST00000547310	PIN1P1	O15428	100 aa		1.81	□□□□□ -2.12
LGR5-204	ENST00000547310		Q6ZRX8	168 aa		1.81	□□□□□ -2.12
LGR5-204	ENST00000547310	PLAC4	Q8WY50	150 aa		1.81	□□□□□ -2.12
LGR5-204	ENST00000547310	ZFHX3	Q15911	3703 aa		1.81	□□□□□ -2.12
LGR5-204	ENST00000547310		A0A096LNT2	108 aa		1.8	□□□□□ -2.12
LGR5-204	ENST00000547310	MRPL33	O75394	65 aa	Known RBP	1.8	□□□□□ -2.12
LGR5-204	ENST00000547310	LMO7	Q8WWI1	1683 aa		1.8	□□□□□ -2.12
LGR5-204	ENST00000547310	GVQW2	A0A096LPI5	108 aa	Predicted RBP	1.79	□□□□□ -2.12
LGR5-204	ENST00000547310	CPSF4L	A6NMK7	179 aa	Known RBP	1.79	□□□□□ -2.12
LGR5-204	ENST00000547310		G3V318	75 aa		1.79	□□□□□ -2.12
LGR5-204	ENST00000547310	SPINK4	O60575	86 aa		1.79	□□□□□ -2.12
LGR5-204	ENST00000547310	LY6G6C	O95867	125 aa		1.79	□□□□□ -2.12
LGR5-204	ENST00000547310	HAMP	P81172	84 aa		1.79	□□□□□ -2.12
LGR5-204	ENST00000547310	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	1.78	□□□□□ -2.12
LGR5-204	ENST00000547310	DEFB131B	A0A096LNP1	70 aa		1.77	□□□□□ -2.13
LGR5-204	ENST00000547310	FXYD6P3	P58550	94 aa		1.77	□□□□□ -2.13
LGR5-204	ENST00000547310	SPINK13	Q1W4C9	94 aa		1.77	□□□□□ -2.13
LGR5-204	ENST00000547310	SSBP3-AS1	Q7Z2R9	100 aa		1.77	□□□□□ -2.13
LGR5-204	ENST00000547310	C4B	P0C0L5	1744 aa		1.77	□□□□□ -2.13
LGR5-204	ENST00000547310	PLXNB2	O15031	1838 aa		1.76	□□□□□ -2.13
LGR5-204	ENST00000547310	NDUFA3	O95167	84 aa		1.76	□□□□□ -2.13
LGR5-204	ENST00000547310	SSC5D	A1L4H1	1573 aa		1.76	□□□□□ -2.13
LGR5-204	ENST00000547310	ANG	P03950	147 aa	Known RBP	1.75	□□□□□ -2.13
LGR5-204	ENST00000547310	UNQ6190/PRO20217	Q6UXQ8	127 aa		1.75	□□□□□ -2.13
LGR5-204	ENST00000547310	LINC00575	Q6W349	94 aa		1.75	□□□□□ -2.13
LGR5-204	ENST00000547310	TMEM167B	Q9NRX6	74 aa		1.75	□□□□□ -2.13
LGR5-204	ENST00000547310	RTTN	Q86VV8	2226 aa		1.75	□□□□□ -2.13
LGR5-204	ENST00000547310	SPTY2D1-AS1	A0A0U1RR47	76 aa		1.74	□□□□□ -2.13
LGR5-204	ENST00000547310	FN1	P02751	2386 aa	Known RBP	1.73	□□□□□ -2.13
LGR5-204	ENST00000547310	FREM1	Q5H8C1	2179 aa		1.72	□□□□□ -2.13
LGR5-204	ENST00000547310	TNC	P24821	2201 aa		1.72	□□□□□ -2.13
LGR5-204	ENST00000547310	CACNA1C	Q13936	2221 aa		1.72	□□□□□ -2.13
LGR5-204	ENST00000547310	OTOGL	Q3ZCN5	2332 aa		1.71	□□□□□ -2.14
LGR5-204	ENST00000547310	RPL37	P61927	97 aa	Known RBP	1.71	□□□□□ -2.14
LGR5-204	ENST00000547310	MED13L	Q71F56	2210 aa		1.71	□□□□□ -2.14
LGR5-204	ENST00000547310	CRIP1	P50238	77 aa		1.7	□□□□□ -2.14

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