RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 DEFB112Q30KQ8 113 aa-0.93□□□□□ -2.56
CCDC38-204ENST00000546816 PSMG4Q5JS54 123 aa-0.93□□□□□ -2.56
CCDC38-204ENST00000546816 MRPL34Q9BQ48 92 aaKnown RBP-0.93□□□□□ -2.56
CCDC38-204ENST00000546816 UBR4Q5T4S7 5183 aa-0.93□□□□□ -2.56
CCDC38-204ENST00000546816 KIAA1551Q9HCM1 1747 aa-0.93□□□□□ -2.56
CCDC38-204ENST00000546816 STARD9Q9P2P6 4700 aa-0.93□□□□□ -2.56
CCDC38-204ENST00000546816 REV3LO60673 3130 aa-0.93□□□□□ -2.56
CCDC38-204ENST00000546816 KNDC1Q76NI1 1749 aa-0.94□□□□□ -2.56
CCDC38-204ENST00000546816 NCOA3Q9Y6Q9 1424 aa-0.94□□□□□ -2.56
CCDC38-204ENST00000546816 H7BZZ5 65 aa-0.94□□□□□ -2.56
CCDC38-204ENST00000546816 ARMS2P0C7Q2 107 aa-0.94□□□□□ -2.56
CCDC38-204ENST00000546816 PMCHL1Q16048 86 aa-0.94□□□□□ -2.56
CCDC38-204ENST00000546816 MLH3Q9UHC1 1453 aa-0.94□□□□□ -2.56
CCDC38-204ENST00000546816 PRDM15P57071 1507 aaPredicted RBP-0.94□□□□□ -2.56
CCDC38-204ENST00000546816 FAM135AQ9P2D6 1515 aa-0.94□□□□□ -2.56
CCDC38-204ENST00000546816 GNGT1P63211 74 aa-0.95□□□□□ -2.56
CCDC38-204ENST00000546816 LELP1Q5T871 98 aa-0.95□□□□□ -2.56
CCDC38-204ENST00000546816 SHPRHQ149N8 1683 aa-0.95□□□□□ -2.56
CCDC38-204ENST00000546816 ZFYVE16Q7Z3T8 1539 aa-0.95□□□□□ -2.56
CCDC38-204ENST00000546816 FAT3Q8TDW7 4589 aa-0.95□□□□□ -2.56
CCDC38-204ENST00000546816 NBPF19A0A087WUL8 3843 aa-0.96□□□□□ -2.56
CCDC38-204ENST00000546816 CCL22O00626 93 aa-0.96□□□□□ -2.56
CCDC38-204ENST00000546816 GNGT2O14610 69 aa-0.96□□□□□ -2.56
CCDC38-204ENST00000546816 TRGV9Q99603 122 aa-0.96□□□□□ -2.56
CCDC38-204ENST00000546816 ABCA3Q99758 1704 aa-0.96□□□□□ -2.56
CCDC38-204ENST00000546816 ADAMTS12P58397 1594 aa-0.96□□□□□ -2.56
CCDC38-204ENST00000546816 PTPN23Q9H3S7 1636 aa-0.97□□□□□ -2.56
CCDC38-204ENST00000546816 C20orf202A1L168 122 aa-0.97□□□□□ -2.56
CCDC38-204ENST00000546816 MPC2O95563 127 aa-0.97□□□□□ -2.56
CCDC38-204ENST00000546816 SARNPP82979 210 aaKnown RBP-0.97□□□□□ -2.56
CCDC38-204ENST00000546816 CUX1P39880 1505 aa-0.98□□□□□ -2.57
CCDC38-204ENST00000546816 SAMD9Q5K651 1589 aa-0.98□□□□□ -2.57
CCDC38-204ENST00000546816 SPTBN4Q9H254 2564 aa-0.99□□□□□ -2.57
CCDC38-204ENST00000546816 SONP18583 2426 aaKnown RBP-0.99□□□□□ -2.57
CCDC38-204ENST00000546816 TRBV7-7A0A0K0K1E9 115 aa-0.99□□□□□ -2.57
CCDC38-204ENST00000546816 SPTY2D1-AS1A0A0U1RR47 76 aa-0.99□□□□□ -2.57
CCDC38-204ENST00000546816 UQCRHP07919 91 aa-0.99□□□□□ -2.57
CCDC38-204ENST00000546816 HEPN1Q6WQI6 88 aa-0.99□□□□□ -2.57
CCDC38-204ENST00000546816 CDKN2A-AS1Q9UH64 79 aa-0.99□□□□□ -2.57
CCDC38-204ENST00000546816 AKAP13Q12802 2813 aa-0.99□□□□□ -2.57
CCDC38-204ENST00000546816 CLIP1P30622 1438 aa-0.99□□□□□ -2.57
CCDC38-204ENST00000546816 NRXN1Q9ULB1 1477 aa-0.99□□□□□ -2.57
CCDC38-204ENST00000546816 KIAA1109Q2LD37 5005 aa-1□□□□□ -2.57
CCDC38-204ENST00000546816 ANKRD36A6QL64 1941 aa-1□□□□□ -2.57
CCDC38-204ENST00000546816 EPG5Q9HCE0 2579 aa-1□□□□□ -2.57
CCDC38-204ENST00000546816 RAPGEF2Q9Y4G8 1499 aa-1□□□□□ -2.57
CCDC38-204ENST00000546816 ABCC2Q92887 1545 aa-1□□□□□ -2.57
CCDC38-204ENST00000546816 DNAH9Q9NYC9 4486 aa-1.01□□□□□ -2.57
CCDC38-204ENST00000546816 TRAV30A0A087WSZ9 112 aa-1.01□□□□□ -2.57
CCDC38-204ENST00000546816 MT-ATP8P03928 68 aa-1.01□□□□□ -2.57
CCDC38-204ENST00000546816 WFDC13Q8IUB5 93 aa-1.01□□□□□ -2.57
CCDC38-204ENST00000546816 HIGD1BQ9P298 99 aa-1.01□□□□□ -2.57
CCDC38-204ENST00000546816 ANKRD36BQ8N2N9 1353 aa-1.01□□□□□ -2.57
CCDC38-204ENST00000546816 MON2Q7Z3U7 1717 aa-1.02□□□□□ -2.57
CCDC38-204ENST00000546816 SERP2Q8N6R1 65 aa-1.02□□□□□ -2.57
CCDC38-204ENST00000546816 PMCHL2Q9BQD1 86 aa-1.02□□□□□ -2.57
CCDC38-204ENST00000546816 EPPK1P58107 5090 aaKnown RBP-1.02□□□□□ -2.57
CCDC38-204ENST00000546816 C5P01031 1676 aa-1.03□□□□□ -2.57
CCDC38-204ENST00000546816 ATOX1O00244 68 aa-1.03□□□□□ -2.57
CCDC38-204ENST00000546816 HMGN3Q15651 99 aa-1.03□□□□□ -2.57
CCDC38-204ENST00000546816 LYSTQ99698 3801 aa-1.03□□□□□ -2.57
CCDC38-204ENST00000546816 TRANK1O15050 2925 aa-1.03□□□□□ -2.57
CCDC38-204ENST00000546816 CICQ96RK0 1608 aaPredicted RBP-1.04□□□□□ -2.58
CCDC38-204ENST00000546816 NBASA2RRP1 2371 aa-1.04□□□□□ -2.58
CCDC38-204ENST00000546816 HIVEP1P15822 2718 aa-1.04□□□□□ -2.58
CCDC38-204ENST00000546816 IGLC2P0DOY2 106 aa-1.04□□□□□ -2.58
CCDC38-204ENST00000546816 IGLC3P0DOY3 106 aa-1.04□□□□□ -2.58
CCDC38-204ENST00000546816 SPRR2FQ96RM1 72 aa-1.04□□□□□ -2.58
CCDC38-204ENST00000546816 VPS13DQ5THJ4 4388 aa-1.04□□□□□ -2.58
CCDC38-204ENST00000546816 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.04□□□□□ -2.58
CCDC38-204ENST00000546816 KNL1Q8NG31 2342 aa-1.04□□□□□ -2.58
CCDC38-204ENST00000546816 PRRC2CQ9Y520 2896 aaKnown RBP-1.04□□□□□ -2.58
CCDC38-204ENST00000546816 TMEM218A2RU14 115 aa-1.05□□□□□ -2.58
CCDC38-204ENST00000546816 ALKAL2Q6UX46 152 aa-1.05□□□□□ -2.58
CCDC38-204ENST00000546816 PSENENQ9NZ42 101 aa-1.05□□□□□ -2.58
CCDC38-204ENST00000546816 AP4S1Q9Y587 144 aa-1.05□□□□□ -2.58
CCDC38-204ENST00000546816 TACC2O95359 2948 aa-1.05□□□□□ -2.58
CCDC38-204ENST00000546816 HTTP42858 3142 aa-1.05□□□□□ -2.58
CCDC38-204ENST00000546816 COL14A1Q05707 1796 aaKnown RBP-1.06□□□□□ -2.58
CCDC38-204ENST00000546816 TNRC18O15417 2968 aaPredicted RBP-1.06□□□□□ -2.58
CCDC38-204ENST00000546816 H0YGG7 62 aa-1.06□□□□□ -2.58
CCDC38-204ENST00000546816 C14orf144Q96I85 54 aa-1.06□□□□□ -2.58
CCDC38-204ENST00000546816 AKAP9Q99996 3911 aa-1.06□□□□□ -2.58
CCDC38-204ENST00000546816 MUC17Q685J3 4493 aa-1.06□□□□□ -2.58
CCDC38-204ENST00000546816 USP9YO00507 2555 aaPredicted RBP-1.07□□□□□ -2.58
CCDC38-204ENST00000546816 MT1AP04731 61 aa-1.07□□□□□ -2.58
CCDC38-204ENST00000546816 S100PP25815 95 aa-1.07□□□□□ -2.58
CCDC38-204ENST00000546816 S100A10P60903 97 aa-1.07□□□□□ -2.58
CCDC38-204ENST00000546816 ETDBQ3ZM63 59 aa-1.07□□□□□ -2.58
CCDC38-204ENST00000546816 BCORQ6W2J9 1755 aa-1.07□□□□□ -2.58
CCDC38-204ENST00000546816 MAGI2Q86UL8 1455 aa-1.07□□□□□ -2.58
CCDC38-204ENST00000546816 CUBNO60494 3623 aa-1.07□□□□□ -2.58
CCDC38-204ENST00000546816 TROQ12816 1431 aaPredicted RBP-1.07□□□□□ -2.58
CCDC38-204ENST00000546816 SPG11Q96JI7 2443 aa-1.08□□□□□ -2.58
CCDC38-204ENST00000546816 D6R8Y8 96 aa-1.08□□□□□ -2.58
CCDC38-204ENST00000546816 F8WEM9 126 aa-1.08□□□□□ -2.58
CCDC38-204ENST00000546816 MUSTN1Q8IVN3 82 aa-1.08□□□□□ -2.58
CCDC38-204ENST00000546816 TEX14Q8IWB6 1497 aa-1.08□□□□□ -2.58
CCDC38-204ENST00000546816 FYCO1Q9BQS8 1478 aa-1.08□□□□□ -2.58
CCDC38-204ENST00000546816 DNAH3Q8TD57 4116 aa-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms