RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
HCFC2-202ENST00000544223 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
HCFC2-202ENST00000544223 TRBV30A0A0K0K1B3 111 aa9.01□□□□□ -0.97
HCFC2-202ENST00000544223 C9JAW5 83 aa9.01□□□□□ -0.97
HCFC2-202ENST00000544223 CXCL5P42830 114 aa9.01□□□□□ -0.97
HCFC2-202ENST00000544223 SMIM11BQ8TCY0 68 aa9□□□□□ -0.97
HCFC2-202ENST00000544223 FAM218AQ96MZ4 157 aa9□□□□□ -0.97
HCFC2-202ENST00000544223 USP17L23D6RBM5 183 aa9□□□□□ -0.97
HCFC2-202ENST00000544223 M0R2N4 97 aa8.99□□□□□ -0.97
HCFC2-202ENST00000544223 COPS9Q8WXC6 57 aa8.99□□□□□ -0.97
HCFC2-202ENST00000544223 COX17Q14061 63 aa8.98□□□□□ -0.97
HCFC2-202ENST00000544223 Q6ZRP5 223 aa8.98□□□□□ -0.97
HCFC2-202ENST00000544223 UPK3BQ9BT76 320 aa8.98□□□□□ -0.97
HCFC2-202ENST00000544223 F8W1H4 67 aa8.97□□□□□ -0.97
HCFC2-202ENST00000544223 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
HCFC2-202ENST00000544223 NHLRC4P0CG21 123 aaPredicted RBP8.97□□□□□ -0.97
HCFC2-202ENST00000544223 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.97
HCFC2-202ENST00000544223 TRAV13-2A0A0B4J235 113 aa8.96□□□□□ -0.97
HCFC2-202ENST00000544223 LINC01620Q4KN68 170 aa8.96□□□□□ -0.98
HCFC2-202ENST00000544223 COX6CP09669 75 aa8.95□□□□□ -0.98
HCFC2-202ENST00000544223 ATXN8Q156A1 80 aa8.95□□□□□ -0.98
HCFC2-202ENST00000544223 LYRM7Q5U5X0 104 aa8.95□□□□□ -0.98
HCFC2-202ENST00000544223 HYDINQ4G0P3 5121 aa8.95□□□□□ -0.98
HCFC2-202ENST00000544223 A0A087WYN8 130 aa8.95□□□□□ -0.98
HCFC2-202ENST00000544223 GVQW2A0A096LPI5 108 aaPredicted RBP8.95□□□□□ -0.98
HCFC2-202ENST00000544223 SLC25A20O43772 301 aa8.95□□□□□ -0.98
HCFC2-202ENST00000544223 SYCNQ0VAF6 134 aa8.95□□□□□ -0.98
HCFC2-202ENST00000544223 HECTD4Q9Y4D8 3996 aa8.94□□□□□ -0.98
HCFC2-202ENST00000544223 LST1O00453 97 aa8.93□□□□□ -0.98
HCFC2-202ENST00000544223 FUSP35637 526 aaKnown RBP eCLIP8.93□□□□□ -0.98
HCFC2-202ENST00000544223 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
HCFC2-202ENST00000544223 ANKRD29Q8N6D5 301 aa8.93□□□□□ -0.98
HCFC2-202ENST00000544223 SRRM2Q9UQ35 2752 aaKnown RBP8.93□□□□□ -0.98
HCFC2-202ENST00000544223 FAM168BA1KXE4 195 aa8.92□□□□□ -0.98
HCFC2-202ENST00000544223 NUPR2A6NF83 97 aa8.92□□□□□ -0.98
HCFC2-202ENST00000544223 RPL28P46779 137 aaKnown RBP8.92□□□□□ -0.98
HCFC2-202ENST00000544223 C9orf129Q5T035 196 aaKnown RBP8.92□□□□□ -0.98
HCFC2-202ENST00000544223 PSCAO43653 123 aa8.91□□□□□ -0.98
HCFC2-202ENST00000544223 A0A1B0GV72 72 aa8.91□□□□□ -0.98
HCFC2-202ENST00000544223 NDUFC2-KCTD14E9PQ53 114 aa8.91□□□□□ -0.98
HCFC2-202ENST00000544223 S100A7L2Q5SY68 101 aa8.91□□□□□ -0.98
HCFC2-202ENST00000544223 CARD19Q96LW7 228 aa8.91□□□□□ -0.98
HCFC2-202ENST00000544223 J3QR89 54 aa8.9□□□□□ -0.98
HCFC2-202ENST00000544223 C2orf48Q96LS8 159 aa8.9□□□□□ -0.98
HCFC2-202ENST00000544223 TEX49A0A1B0GTD5 131 aa8.9□□□□□ -0.99
HCFC2-202ENST00000544223 TRBV10-3A0A0K0K1G6 114 aa8.89□□□□□ -0.99
HCFC2-202ENST00000544223 SCGB1A1P11684 91 aa8.89□□□□□ -0.99
HCFC2-202ENST00000544223 GAGE2BQ13066 116 aa8.89□□□□□ -0.99
HCFC2-202ENST00000544223 C6orf99Q4VX62 202 aa8.89□□□□□ -0.99
HCFC2-202ENST00000544223 SERTAD4-AS1Q5TG53 156 aa8.89□□□□□ -0.99
HCFC2-202ENST00000544223 PPDPFQ9H3Y8 114 aa8.89□□□□□ -0.99
HCFC2-202ENST00000544223 NDUFC2O95298 119 aa8.87□□□□□ -0.99
HCFC2-202ENST00000544223 SIGMAR1Q99720 223 aa8.87□□□□□ -0.99
HCFC2-202ENST00000544223 TRBV10-2A0A0K0K1G8 114 aa8.87□□□□□ -0.99
HCFC2-202ENST00000544223 NBDYA0A0U1RRE5 68 aa8.87□□□□□ -0.99
HCFC2-202ENST00000544223 VPREB1P12018 145 aa8.86□□□□□ -0.99
HCFC2-202ENST00000544223 RMI2Q96E14 147 aa8.86□□□□□ -0.99
HCFC2-202ENST00000544223 TMEM126AQ9H061 195 aa8.86□□□□□ -0.99
HCFC2-202ENST00000544223 TEN1Q86WV5 123 aa8.85□□□□□ -0.99
HCFC2-202ENST00000544223 DNAH6Q9C0G6 4158 aa8.85□□□□□ -0.99
HCFC2-202ENST00000544223 IGKV2-24A0A0C4DH68 120 aa8.85□□□□□ -0.99
HCFC2-202ENST00000544223 FRAS1Q86XX4 4008 aa8.85□□□□□ -0.99
HCFC2-202ENST00000544223 RPL37AP8A6NKH3 93 aa8.84□□□□□ -0.99
HCFC2-202ENST00000544223 KRTAP7-1Q8IUC3 87 aa8.84□□□□□ -0.99
HCFC2-202ENST00000544223 C22orf24Q9Y442 160 aa8.84□□□□□ -0.99
HCFC2-202ENST00000544223 IGLV6-57P01721 117 aa8.83□□□□□ -1
HCFC2-202ENST00000544223 BAALC-AS2P0C853 105 aa8.82□□□□□ -1
HCFC2-202ENST00000544223 FAM19A5Q7Z5A7 132 aaPredicted RBP8.82□□□□□ -1
HCFC2-202ENST00000544223 CHTF8P0CG12 524 aa8.81□□□□□ -1
HCFC2-202ENST00000544223 MUC7Q8TAX7 377 aa8.81□□□□□ -1
HCFC2-202ENST00000544223 TRAV23DV6A0A075B6W5 121 aa8.8□□□□□ -1
HCFC2-202ENST00000544223 LY6G6CO95867 125 aa8.8□□□□□ -1
HCFC2-202ENST00000544223 KRTAP21-3Q3LHN1 58 aa8.8□□□□□ -1
HCFC2-202ENST00000544223 Q6ZRN7 208 aaPredicted RBP8.8□□□□□ -1
HCFC2-202ENST00000544223 A0A096LNI7 61 aa8.79□□□□□ -1
HCFC2-202ENST00000544223 DNAL4O96015 105 aa8.79□□□□□ -1
HCFC2-202ENST00000544223 LRCOL1A6NCL2 159 aa8.79□□□□□ -1
HCFC2-202ENST00000544223 TRACP01848 142 aa8.79□□□□□ -1
HCFC2-202ENST00000544223 C7orf33Q8WU49 177 aa8.79□□□□□ -1
HCFC2-202ENST00000544223 PPDPFLQ8WWR9 84 aa8.78□□□□□ -1
HCFC2-202ENST00000544223 H0YGX0 51 aa8.78□□□□□ -1
HCFC2-202ENST00000544223 NKAPP1Q8N9T2 125 aa8.78□□□□□ -1
HCFC2-202ENST00000544223 ZNF73O43830 326 aaPredicted RBP8.77□□□□□ -1.01
HCFC2-202ENST00000544223 Q8N814 137 aa8.77□□□□□ -1.01
HCFC2-202ENST00000544223 M0R378 163 aa8.77□□□□□ -1.01
HCFC2-202ENST00000544223 C4orf48Q5BLP8 95 aa8.77□□□□□ -1.01
HCFC2-202ENST00000544223 H3BT86 120 aa8.76□□□□□ -1.01
HCFC2-202ENST00000544223 PANO1I0J062 215 aa8.75□□□□□ -1.01
HCFC2-202ENST00000544223 A0A1W2PNN7 141 aa8.75□□□□□ -1.01
HCFC2-202ENST00000544223 TLX1NBP0CAT3 122 aa8.75□□□□□ -1.01
HCFC2-202ENST00000544223 DNAH17Q9UFH2 4485 aa8.74□□□□□ -1.01
HCFC2-202ENST00000544223 LOC107984640A0A0U1RRK4 108 aa8.74□□□□□ -1.01
HCFC2-202ENST00000544223 TTC32Q5I0X7 151 aa8.74□□□□□ -1.01
HCFC2-202ENST00000544223 LINC00575Q6W349 94 aa8.74□□□□□ -1.01
HCFC2-202ENST00000544223 DIRC1Q969H9 104 aa8.74□□□□□ -1.01
HCFC2-202ENST00000544223 LINC00167Q96N53 147 aa8.74□□□□□ -1.01
HCFC2-202ENST00000544223 F8WDY8 70 aa8.73□□□□□ -1.01
HCFC2-202ENST00000544223 DNAH5Q8TE73 4624 aa8.72□□□□□ -1.01
HCFC2-202ENST00000544223 DNAH11Q96DT5 4516 aa8.72□□□□□ -1.01
HCFC2-202ENST00000544223 DNAH8Q96JB1 4490 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 217.3 ms