RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 SLC39A9Q9NUM3 307 aa3□□□□□ -1.93
SMCO2-206ENST00000543991 IGHV1-58A0A0C4DH39 117 aa2.99□□□□□ -1.93
SMCO2-206ENST00000543991 LOC100130705A0A1B0GUX0 176 aa2.99□□□□□ -1.93
SMCO2-206ENST00000543991 CRYM-AS1A6NIL9 109 aa2.99□□□□□ -1.93
SMCO2-206ENST00000543991 CFDP00746 253 aaPredicted RBP2.99□□□□□ -1.93
SMCO2-206ENST00000543991 CXCL1P09341 107 aa2.99□□□□□ -1.93
SMCO2-206ENST00000543991 SFTA3P0C7M3 94 aa2.99□□□□□ -1.93
SMCO2-206ENST00000543991 Q0VG73 95 aa2.99□□□□□ -1.93
SMCO2-206ENST00000543991 ELOBQ15370 118 aa2.99□□□□□ -1.93
SMCO2-206ENST00000543991 GTF2H5Q6ZYL4 71 aa2.99□□□□□ -1.93
SMCO2-206ENST00000543991 ZNF431Q8TF32 576 aaPredicted RBP2.99□□□□□ -1.93
SMCO2-206ENST00000543991 NAA38Q9BRA0 125 aaKnown RBP2.99□□□□□ -1.93
SMCO2-206ENST00000543991 TMEM191AQ9H0A3 160 aa2.99□□□□□ -1.93
SMCO2-206ENST00000543991 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.98□□□□□ -1.93
SMCO2-206ENST00000543991 TRAV13-1A0A0B4J241 112 aa2.98□□□□□ -1.93
SMCO2-206ENST00000543991 TRAV1-1A0A0B4J248 108 aa2.98□□□□□ -1.93
SMCO2-206ENST00000543991 TCRBV3S1A0A5B6 114 aa2.98□□□□□ -1.93
SMCO2-206ENST00000543991 IFITM5A6NNB3 132 aa2.98□□□□□ -1.93
SMCO2-206ENST00000543991 CCL25O15444 150 aa2.98□□□□□ -1.93
SMCO2-206ENST00000543991 SLC25A5P05141 298 aaKnown RBP2.98□□□□□ -1.93
SMCO2-206ENST00000543991 A0A087WWC5 75 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 IGHV3-73A0A0B4J1V6 119 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 C7orf71A4D174 169 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 C19orf71A6NCJ1 209 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 H3BMG7 143 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 HBBP68871 147 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 ZNF90Q03938 601 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 TPRXLQ17RH7 258 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 LINC01554Q52M75 96 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 LCN15Q6UWW0 184 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 BPIFA4PQ86YQ2 179 aa2.97□□□□□ -1.93
SMCO2-206ENST00000543991 FAM236AA0A1B0GUQ0 79 aa2.96□□□□□ -1.94
SMCO2-206ENST00000543991 FAM236BA0A1B0GV22 79 aa2.96□□□□□ -1.94
SMCO2-206ENST00000543991 GRIFINA4D1Z8 144 aa2.96□□□□□ -1.94
SMCO2-206ENST00000543991 A8MWV9 139 aa2.96□□□□□ -1.94
SMCO2-206ENST00000543991 LEPROTO15243 131 aa2.96□□□□□ -1.94
SMCO2-206ENST00000543991 HIST1H4AP62805 103 aaKnown RBP2.96□□□□□ -1.94
SMCO2-206ENST00000543991 RHOHQ15669 191 aa2.96□□□□□ -1.94
SMCO2-206ENST00000543991 MEIG1Q5JSS6 88 aa2.96□□□□□ -1.94
SMCO2-206ENST00000543991 ATG5Q9H1Y0 275 aa2.96□□□□□ -1.94
SMCO2-206ENST00000543991 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
SMCO2-206ENST00000543991 TRBV6-4A0A1B0GX49 114 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 HIST1H2BKO60814 126 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 TCRAP04437 139 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 HIST1H2BJP06899 126 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 UBE2D1P51668 147 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 FOXA3P55318 350 aaPredicted RBP2.95□□□□□ -1.94
SMCO2-206ENST00000543991 COL5A1-AS1Q5SY13 56 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 DIRC1Q969H9 104 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 TRGV9Q99603 122 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 SLC50A1Q9BRV3 221 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 TTTY13Q9BZ97 58 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 XAGE1AQ9HD64 81 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 OSTCQ9NRP0 149 aa2.95□□□□□ -1.94
SMCO2-206ENST00000543991 TXNL4BQ9NX01 149 aaKnown RBP2.95□□□□□ -1.94
SMCO2-206ENST00000543991 TRBV27A0A0K0K1C4 114 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 K7ERJ3 54 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 CRPP02741 224 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 MT1HP80294 61 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 HIST3H2BBQ8N257 126 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 OR5H6Q8NGV6 325 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 CIB3Q96Q77 187 aaPredicted RBP2.94□□□□□ -1.94
SMCO2-206ENST00000543991 HIST1H2BLQ99880 126 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 SNHG12Q9BXW3 62 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 Q9H521 79 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 CACFD1Q9UGQ2 172 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 EPDR1Q9UM22 224 aa2.94□□□□□ -1.94
SMCO2-206ENST00000543991 ZNF727A8MUV8 499 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 FNDC10F2Z333 226 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 H3BRN7 92 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 MT-ND6P03923 174 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 NMBP08949 121 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 RNASE4P34096 147 aaKnown RBP2.93□□□□□ -1.94
SMCO2-206ENST00000543991 S100A10P60903 97 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 AKR1C1Q04828 323 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 HSD52Q0P140 79 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 ASB16-AS1Q495Z4 193 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 NMSQ5H8A3 153 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 IZUMO2Q6UXV1 221 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 MIR17HGQ75NE6 70 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 PHF5AQ7RTV0 110 aaKnown RBP2.93□□□□□ -1.94
SMCO2-206ENST00000543991 PRELID3AQ96N28 172 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 MIEN1Q9BRT3 115 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 NPCDR1Q9BY65 106 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 LINC00474Q9P2X8 69 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 AP4S1Q9Y587 144 aa2.93□□□□□ -1.94
SMCO2-206ENST00000543991 MUC21A0A0G2JKD1 596 aa2.92□□□□□ -1.94
SMCO2-206ENST00000543991 CEBPZOSA8MTT3 80 aa2.92□□□□□ -1.94
SMCO2-206ENST00000543991 CCDC179H3BU77 68 aa2.92□□□□□ -1.94
SMCO2-206ENST00000543991 PDCD5O14737 125 aa2.92□□□□□ -1.94
SMCO2-206ENST00000543991 AQP4P55087 323 aa2.92□□□□□ -1.94
SMCO2-206ENST00000543991 COX6A2Q02221 97 aa2.92□□□□□ -1.94
SMCO2-206ENST00000543991 MIAQ16674 131 aa2.92□□□□□ -1.94
SMCO2-206ENST00000543991 EIF5AL1Q6IS14 154 aaKnown RBP2.92□□□□□ -1.94
SMCO2-206ENST00000543991 C9orf62Q8N4C0 152 aa2.92□□□□□ -1.94
SMCO2-206ENST00000543991 SCGB3A1Q96QR1 104 aa2.92□□□□□ -1.94
SMCO2-206ENST00000543991 COMMD3Q9UBI1 195 aa2.92□□□□□ -1.94
SMCO2-206ENST00000543991 MUC17Q685J3 4493 aa2.91□□□□□ -1.94
SMCO2-206ENST00000543991 M0R2P5 195 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms