RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 S100PP25815 95 aa2.76□□□□□ -1.97
NPIPB3-211ENST00000542953 FABP9Q0Z7S8 132 aa2.76□□□□□ -1.97
NPIPB3-211ENST00000542953 RHEBQ15382 184 aa2.76□□□□□ -1.97
NPIPB3-211ENST00000542953 PDZD11Q5EBL8 140 aa2.76□□□□□ -1.97
NPIPB3-211ENST00000542953 PAPPA-AS1Q5QFB9 102 aa2.76□□□□□ -1.97
NPIPB3-211ENST00000542953 PACRGQ96M98 296 aaPredicted RBP2.76□□□□□ -1.97
NPIPB3-211ENST00000542953 XAGE1AQ9HD64 81 aa2.76□□□□□ -1.97
NPIPB3-211ENST00000542953 RPS10P5Q9NQ39 176 aa2.76□□□□□ -1.97
NPIPB3-211ENST00000542953 C22orf24Q9Y442 160 aa2.76□□□□□ -1.97
NPIPB3-211ENST00000542953 IGLV5-39A0A0G2JS06 123 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 F8VRH5 84 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 PRSS2P07478 247 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 SPINK8P0C7L1 97 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 G0S2P27469 103 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 CKS1BP61024 79 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 SEC11AP67812 179 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 PMVKQ15126 192 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 COX19Q49B96 90 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 C18orf32Q8TCD1 76 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 COX7B2Q8TF08 81 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 PPDPFQ9H3Y8 114 aa2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 GEMIN7Q9H840 131 aaKnown RBP2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 FLGP20930 4061 aaPredicted RBP2.75□□□□□ -1.97
NPIPB3-211ENST00000542953 LINC01549A6NIU2 74 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 APOC3P02656 99 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 LINC00614P0C842 121 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 IGLC3P0DOY3 106 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 ZNF22P17026 224 aaPredicted RBP2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 SEC61BP60468 96 aaKnown RBP2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 UBE2BP63146 152 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 PMCHL1Q16048 86 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 FA2HQ7L5A8 372 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 Q8NDZ9 215 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 TYMSOSQ8TAI1 123 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 LINC00167Q96N53 147 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 TP73-AS1Q9UF72 201 aa2.74□□□□□ -1.97
NPIPB3-211ENST00000542953 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 IGLV5-37A0A075B6J1 123 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 C11orf86A6NJI1 115 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 ZNF861PO60384 105 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 SCO1O75880 301 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 CXCL5P42830 114 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 RAB5BP61020 215 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 KRTAP13-3Q3SY46 172 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 MRPL55Q7Z7F7 128 aaKnown RBP2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 KRTAP13-1Q8IUC0 172 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 SVIPQ8NHG7 77 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 SMCO4Q9NRQ5 59 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 TRAPPC1Q9Y5R8 145 aa2.73□□□□□ -1.97
NPIPB3-211ENST00000542953 GAGE10A6NGK3 116 aa2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 RPL37AP8A6NKH3 93 aa2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 NUPR1O60356 82 aa2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 BCE1O60756 84 aa2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 HBDP02042 147 aa2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 LBHQ53QV2 105 aaPredicted RBP2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 FP248Q71RG6 208 aaPredicted RBP2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 SVBPQ8N300 66 aa2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 LINC00304Q8N9R0 145 aa2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 ZNF625Q96I27 306 aaPredicted RBP2.72□□□□□ -1.97
NPIPB3-211ENST00000542953 H3BRM9 83 aa2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 SNAPINO95295 136 aa2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 VPREB1P12018 145 aa2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 PFN2P35080 140 aa2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 NDUFA6P56556 154 aa2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 BAGE3Q86Y29 109 aa2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 CBLN2Q8IUK8 224 aa2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 LINC00337Q8N6G1 96 aa2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 SND1-IT1Q9HBX3 110 aa2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 ANAPC11Q9NYG5 84 aa2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 MACF1Q9UPN3 7388 aaKnown RBP2.71□□□□□ -1.98
NPIPB3-211ENST00000542953 TMEM223A0PJW6 202 aa2.7□□□□□ -1.98
NPIPB3-211ENST00000542953 ATP5LO75964 103 aa2.7□□□□□ -1.98
NPIPB3-211ENST00000542953 CHCHD1Q96BP2 118 aaKnown RBP2.7□□□□□ -1.98
NPIPB3-211ENST00000542953 ERG28Q9UKR5 140 aa2.7□□□□□ -1.98
NPIPB3-211ENST00000542953 CHTOPQ9Y3Y2 248 aaKnown RBP2.7□□□□□ -1.98
NPIPB3-211ENST00000542953 IGKV2-28A0A075B6P5 120 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 TRAV12-1A0A0B4J245 112 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 TMEM238C9JI98 176 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 M0R378 163 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 IGKV2D-28P01615 120 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 IGKV2-30P06310 120 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 RPL28P46779 137 aaKnown RBP2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 COX17Q14061 63 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 NDUFA5Q16718 116 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 TMEM170BQ5T4T1 132 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 SLC7A5P1Q8MH63 180 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 FAM19A2Q8N3H0 131 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 IFI27L1Q96BM0 104 aa2.69□□□□□ -1.98
NPIPB3-211ENST00000542953 COLCA2A8K830 154 aa2.68□□□□□ -1.98
NPIPB3-211ENST00000542953 TRGC2P03986 189 aa2.68□□□□□ -1.98
NPIPB3-211ENST00000542953 TSPEAR-AS2P59090 65 aa2.68□□□□□ -1.98
NPIPB3-211ENST00000542953 FAM229BQ4G0N7 80 aa2.68□□□□□ -1.98
NPIPB3-211ENST00000542953 NKAPP1Q8N9T2 125 aa2.68□□□□□ -1.98
NPIPB3-211ENST00000542953 TMEM126AQ9H061 195 aa2.68□□□□□ -1.98
NPIPB3-211ENST00000542953 A0A0U1RRA0 63 aa2.67□□□□□ -1.98
NPIPB3-211ENST00000542953 B5MCH6 92 aa2.67□□□□□ -1.98
NPIPB3-211ENST00000542953 KRTAP4-16G5E9R7 235 aaPredicted RBP2.67□□□□□ -1.98
NPIPB3-211ENST00000542953 M0R2T5 61 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms