RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 RPL24P83731 157 aaKnown RBP7.56□□□□□ -1.2
SRGAP1-205ENST00000542841 ERG28Q9UKR5 140 aa7.56□□□□□ -1.2
SRGAP1-205ENST00000542841 PSCAO43653 123 aa7.54□□□□□ -1.2
SRGAP1-205ENST00000542841 C14orf177Q52M58 125 aa7.54□□□□□ -1.2
SRGAP1-205ENST00000542841 COL5A1-AS1Q5SY13 56 aa7.54□□□□□ -1.2
SRGAP1-205ENST00000542841 FAM30AQ9NZY2 134 aa7.54□□□□□ -1.2
SRGAP1-205ENST00000542841 PLA2G2DQ9UNK4 145 aa7.54□□□□□ -1.2
SRGAP1-205ENST00000542841 USP17L23D6RBM5 183 aa7.53□□□□□ -1.2
SRGAP1-205ENST00000542841 SMIM13P0DJ93 91 aa7.53□□□□□ -1.2
SRGAP1-205ENST00000542841 FXYD2P54710 66 aa7.53□□□□□ -1.2
SRGAP1-205ENST00000542841 BATFQ16520 125 aa7.53□□□□□ -1.2
SRGAP1-205ENST00000542841 RNF151Q2KHN1 245 aa7.53□□□□□ -1.2
SRGAP1-205ENST00000542841 ADAMTSL4-AS1Q5T5F5 129 aa7.53□□□□□ -1.2
SRGAP1-205ENST00000542841 C2orf82Q6UX34 121 aa7.53□□□□□ -1.2
SRGAP1-205ENST00000542841 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
SRGAP1-205ENST00000542841 CAMK2N2Q96S95 79 aa7.53□□□□□ -1.2
SRGAP1-205ENST00000542841 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.52□□□□□ -1.21
SRGAP1-205ENST00000542841 LRCOL1A6NCL2 159 aa7.52□□□□□ -1.21
SRGAP1-205ENST00000542841 LINC00158P58513 81 aa7.52□□□□□ -1.21
SRGAP1-205ENST00000542841 MUSTN1Q8IVN3 82 aa7.52□□□□□ -1.21
SRGAP1-205ENST00000542841 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.21
SRGAP1-205ENST00000542841 LOC107984156A0A0G2JMH3 177 aa7.51□□□□□ -1.21
SRGAP1-205ENST00000542841 A0A1B0GWB2 263 aa7.51□□□□□ -1.21
SRGAP1-205ENST00000542841 HIGD2BQ4VC39 106 aa7.51□□□□□ -1.21
SRGAP1-205ENST00000542841 UNQ6190/PRO20217Q6UXQ8 127 aa7.51□□□□□ -1.21
SRGAP1-205ENST00000542841 ARL17AQ8IVW1 177 aa7.51□□□□□ -1.21
SRGAP1-205ENST00000542841 MIR7-3HGQ8N6C7 128 aa7.51□□□□□ -1.21
SRGAP1-205ENST00000542841 Q8N814 137 aa7.51□□□□□ -1.21
SRGAP1-205ENST00000542841 SYCNQ0VAF6 134 aa7.5□□□□□ -1.21
SRGAP1-205ENST00000542841 C6orf48Q9UBA6 75 aa7.5□□□□□ -1.21
SRGAP1-205ENST00000542841 A0A0B4J2C4 111 aa7.49□□□□□ -1.21
SRGAP1-205ENST00000542841 OXTP01178 125 aa7.49□□□□□ -1.21
SRGAP1-205ENST00000542841 PFN2P35080 140 aa7.49□□□□□ -1.21
SRGAP1-205ENST00000542841 C10orf25Q5T742 122 aa7.49□□□□□ -1.21
SRGAP1-205ENST00000542841 NHP2Q9NX24 153 aaKnown RBP7.49□□□□□ -1.21
SRGAP1-205ENST00000542841 LRP1Q07954 4544 aaKnown RBP7.48□□□□□ -1.21
SRGAP1-205ENST00000542841 A4D1N5 150 aa7.48□□□□□ -1.21
SRGAP1-205ENST00000542841 TLX1NBP0CAT3 122 aa7.48□□□□□ -1.21
SRGAP1-205ENST00000542841 Q6ZRU5 148 aa7.48□□□□□ -1.21
SRGAP1-205ENST00000542841 LINC00526Q96FQ7 95 aa7.48□□□□□ -1.21
SRGAP1-205ENST00000542841 CARD19Q96LW7 228 aa7.48□□□□□ -1.21
SRGAP1-205ENST00000542841 DNAH8Q96JB1 4490 aa7.48□□□□□ -1.21
SRGAP1-205ENST00000542841 A0A0U1RRA0 63 aa7.47□□□□□ -1.21
SRGAP1-205ENST00000542841 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
SRGAP1-205ENST00000542841 Q6ZSA8 131 aa7.47□□□□□ -1.21
SRGAP1-205ENST00000542841 DAND5Q8N907 189 aa7.47□□□□□ -1.21
SRGAP1-205ENST00000542841 PKIGQ9Y2B9 76 aa7.47□□□□□ -1.21
SRGAP1-205ENST00000542841 NDUFC2-KCTD14E9PQ53 114 aa7.46□□□□□ -1.22
SRGAP1-205ENST00000542841 NDUFC2O95298 119 aa7.46□□□□□ -1.22
SRGAP1-205ENST00000542841 CFC1BP0CG36 223 aa7.46□□□□□ -1.22
SRGAP1-205ENST00000542841 CFC1P0CG37 223 aa7.46□□□□□ -1.22
SRGAP1-205ENST00000542841 SOSTDC1Q6X4U4 206 aa7.46□□□□□ -1.22
SRGAP1-205ENST00000542841 RAB37Q96AX2 223 aa7.46□□□□□ -1.22
SRGAP1-205ENST00000542841 C9orf116Q5BN46 136 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-205ENST00000542841 SND1-IT1Q9HBX3 110 aa7.45□□□□□ -1.22
SRGAP1-205ENST00000542841 TAX1BP3O14907 124 aa7.44□□□□□ -1.22
SRGAP1-205ENST00000542841 NPC2P61916 151 aa7.44□□□□□ -1.22
SRGAP1-205ENST00000542841 PRO1854Q9UHT4 67 aa7.44□□□□□ -1.22
SRGAP1-205ENST00000542841 TRAV13-2A0A0B4J235 113 aa7.43□□□□□ -1.22
SRGAP1-205ENST00000542841 C9orf118A6NHY6 69 aa7.43□□□□□ -1.22
SRGAP1-205ENST00000542841 WFDC2Q14508 124 aa7.43□□□□□ -1.22
SRGAP1-205ENST00000542841 LOC107984640A0A0U1RRK4 108 aa7.42□□□□□ -1.22
SRGAP1-205ENST00000542841 LECT2O14960 151 aa7.42□□□□□ -1.22
SRGAP1-205ENST00000542841 EIF4EBP3O60516 100 aaPredicted RBP7.42□□□□□ -1.22
SRGAP1-205ENST00000542841 SLPIP03973 132 aa7.42□□□□□ -1.22
SRGAP1-205ENST00000542841 SCXQ7RTU7 201 aa7.42□□□□□ -1.22
SRGAP1-205ENST00000542841 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
SRGAP1-205ENST00000542841 K7ERJ3 54 aa7.41□□□□□ -1.22
SRGAP1-205ENST00000542841 KRTAP10-4P60372 401 aaPredicted RBP7.41□□□□□ -1.22
SRGAP1-205ENST00000542841 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.4□□□□□ -1.22
SRGAP1-205ENST00000542841 TRBV10-2A0A0K0K1G8 114 aa7.4□□□□□ -1.22
SRGAP1-205ENST00000542841 LYRM7Q5U5X0 104 aa7.39□□□□□ -1.23
SRGAP1-205ENST00000542841 Q6ZRP5 223 aa7.39□□□□□ -1.23
SRGAP1-205ENST00000542841 IGKV2-28A0A075B6P5 120 aa7.38□□□□□ -1.23
SRGAP1-205ENST00000542841 TSPAN13O95857 204 aa7.38□□□□□ -1.23
SRGAP1-205ENST00000542841 IGKV2D-28P01615 120 aa7.38□□□□□ -1.23
SRGAP1-205ENST00000542841 RPL18AQ02543 176 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-205ENST00000542841 C9orf163Q8N9P6 203 aa7.38□□□□□ -1.23
SRGAP1-205ENST00000542841 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
SRGAP1-205ENST00000542841 H3BUT2 72 aa7.37□□□□□ -1.23
SRGAP1-205ENST00000542841 RPL13AP40429 203 aaKnown RBP7.37□□□□□ -1.23
SRGAP1-205ENST00000542841 LINC01620Q4KN68 170 aa7.37□□□□□ -1.23
SRGAP1-205ENST00000542841 TMEM126AQ9H061 195 aa7.37□□□□□ -1.23
SRGAP1-205ENST00000542841 CBY1Q9Y3M2 126 aa7.37□□□□□ -1.23
SRGAP1-205ENST00000542841 A0A1W2PPM0 123 aa7.36□□□□□ -1.23
SRGAP1-205ENST00000542841 FABP2P12104 132 aa7.36□□□□□ -1.23
SRGAP1-205ENST00000542841 Q1RN00 199 aa7.36□□□□□ -1.23
SRGAP1-205ENST00000542841 GAGE2EQ4V326 116 aa7.36□□□□□ -1.23
SRGAP1-205ENST00000542841 LINC00337Q8N6G1 96 aa7.36□□□□□ -1.23
SRGAP1-205ENST00000542841 CIRBP-AS1Q8TBR5 109 aa7.36□□□□□ -1.23
SRGAP1-205ENST00000542841 XAGE1AQ9HD64 81 aa7.36□□□□□ -1.23
SRGAP1-205ENST00000542841 GAGE2DQ9UEU5 116 aa7.36□□□□□ -1.23
SRGAP1-205ENST00000542841 IGLV5-37A0A075B6J1 123 aa7.35□□□□□ -1.23
SRGAP1-205ENST00000542841 A0A1B0GV90 55 aa7.35□□□□□ -1.23
SRGAP1-205ENST00000542841 COX6CP09669 75 aa7.35□□□□□ -1.23
SRGAP1-205ENST00000542841 VPREB1P12018 145 aa7.35□□□□□ -1.23
SRGAP1-205ENST00000542841 C9orf129Q5T035 196 aaKnown RBP7.35□□□□□ -1.23
SRGAP1-205ENST00000542841 LINC00474Q9P2X8 69 aa7.35□□□□□ -1.23
SRGAP1-205ENST00000542841 M0R378 163 aa7.34□□□□□ -1.23
SRGAP1-205ENST00000542841 RPL28P46779 137 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms