RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 COL5A1-AS1Q5SY13 56 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 LINC00308Q8TCZ7 52 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 LINC00526Q96FQ7 95 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 CAMK2N2Q96S95 79 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 C6orf48Q9UBA6 75 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 LOC107984156A0A0G2JMH3 177 aa6.05□□□□□ -1.44
LDHA-220ENST00000542179 A0A0U1RRA0 63 aa6.05□□□□□ -1.44
LDHA-220ENST00000542179 PFN2P35080 140 aa6.05□□□□□ -1.44
LDHA-220ENST00000542179 SYCNQ0VAF6 134 aa6.05□□□□□ -1.44
LDHA-220ENST00000542179 RNF151Q2KHN1 245 aa6.05□□□□□ -1.44
LDHA-220ENST00000542179 ARL17AQ8IVW1 177 aa6.05□□□□□ -1.44
LDHA-220ENST00000542179 MIR7-3HGQ8N6C7 128 aa6.05□□□□□ -1.44
LDHA-220ENST00000542179 DAND5Q8N907 189 aa6.05□□□□□ -1.44
LDHA-220ENST00000542179 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.04□□□□□ -1.44
LDHA-220ENST00000542179 A4D1N5 150 aa6.04□□□□□ -1.44
LDHA-220ENST00000542179 LRCOL1A6NCL2 159 aa6.04□□□□□ -1.44
LDHA-220ENST00000542179 C9orf118A6NHY6 69 aa6.04□□□□□ -1.44
LDHA-220ENST00000542179 C14orf177Q52M58 125 aa6.04□□□□□ -1.44
LDHA-220ENST00000542179 Q6ZRU5 148 aa6.04□□□□□ -1.44
LDHA-220ENST00000542179 VPS13DQ5THJ4 4388 aa6.04□□□□□ -1.44
LDHA-220ENST00000542179 M0R2N4 97 aa6.03□□□□□ -1.44
LDHA-220ENST00000542179 SLPIP03973 132 aa6.03□□□□□ -1.44
LDHA-220ENST00000542179 C9orf116Q5BN46 136 aaPredicted RBP6.03□□□□□ -1.44
LDHA-220ENST00000542179 SOSTDC1Q6X4U4 206 aa6.03□□□□□ -1.44
LDHA-220ENST00000542179 CDIP1Q9H305 208 aa6.03□□□□□ -1.44
LDHA-220ENST00000542179 TENM2Q9NT68 2774 aa6.02□□□□□ -1.45
LDHA-220ENST00000542179 A0A0B4J2C4 111 aa6.02□□□□□ -1.45
LDHA-220ENST00000542179 TLX1NBP0CAT3 122 aa6.02□□□□□ -1.45
LDHA-220ENST00000542179 CFC1BP0CG36 223 aa6.02□□□□□ -1.45
LDHA-220ENST00000542179 CFC1P0CG37 223 aa6.02□□□□□ -1.45
LDHA-220ENST00000542179 CNBPP62633 177 aaKnown RBP6.02□□□□□ -1.45
LDHA-220ENST00000542179 WFDC2Q14508 124 aa6.02□□□□□ -1.45
LDHA-220ENST00000542179 CARD19Q96LW7 228 aa6.02□□□□□ -1.45
LDHA-220ENST00000542179 NHP2Q9NX24 153 aaKnown RBP6.02□□□□□ -1.45
LDHA-220ENST00000542179 NDUFC2-KCTD14E9PQ53 114 aa6.01□□□□□ -1.45
LDHA-220ENST00000542179 TAX1BP3O14907 124 aa6.01□□□□□ -1.45
LDHA-220ENST00000542179 LECT2O14960 151 aa6.01□□□□□ -1.45
LDHA-220ENST00000542179 NPC2P61916 151 aa6.01□□□□□ -1.45
LDHA-220ENST00000542179 C1orf134Q5TEV5 83 aa6.01□□□□□ -1.45
LDHA-220ENST00000542179 LYSTQ99698 3801 aa6.01□□□□□ -1.45
LDHA-220ENST00000542179 SND1-IT1Q9HBX3 110 aa6.01□□□□□ -1.45
LDHA-220ENST00000542179 NDUFC2O95298 119 aa6□□□□□ -1.45
LDHA-220ENST00000542179 PRO1854Q9UHT4 67 aa6□□□□□ -1.45
LDHA-220ENST00000542179 A0A087WTM6 91 aa5.99□□□□□ -1.45
LDHA-220ENST00000542179 K7ERJ3 54 aa5.99□□□□□ -1.45
LDHA-220ENST00000542179 RAB37Q96AX2 223 aa5.99□□□□□ -1.45
LDHA-220ENST00000542179 Q8N814 137 aa5.98□□□□□ -1.45
LDHA-220ENST00000542179 IGKV2-28A0A075B6P5 120 aa5.97□□□□□ -1.45
LDHA-220ENST00000542179 LOC107984640A0A0U1RRK4 108 aa5.97□□□□□ -1.45
LDHA-220ENST00000542179 IGKV2D-28P01615 120 aa5.97□□□□□ -1.45
LDHA-220ENST00000542179 Q6ZRP5 223 aa5.97□□□□□ -1.45
LDHA-220ENST00000542179 ALMS1Q8TCU4 4167 aa5.97□□□□□ -1.45
LDHA-220ENST00000542179 TRAV13-2A0A0B4J235 113 aa5.96□□□□□ -1.46
LDHA-220ENST00000542179 LCE6AA0A183 80 aa5.96□□□□□ -1.46
LDHA-220ENST00000542179 C9orf163Q8N9P6 203 aa5.96□□□□□ -1.46
LDHA-220ENST00000542179 PKIGQ9Y2B9 76 aa5.96□□□□□ -1.46
LDHA-220ENST00000542179 TRBV10-2A0A0K0K1G8 114 aa5.95□□□□□ -1.46
LDHA-220ENST00000542179 TSPAN13O95857 204 aa5.95□□□□□ -1.46
LDHA-220ENST00000542179 GAGE2EQ4V326 116 aa5.95□□□□□ -1.46
LDHA-220ENST00000542179 LINC00337Q8N6G1 96 aa5.95□□□□□ -1.46
LDHA-220ENST00000542179 XAGE1AQ9HD64 81 aa5.95□□□□□ -1.46
LDHA-220ENST00000542179 GAGE2DQ9UEU5 116 aa5.95□□□□□ -1.46
LDHA-220ENST00000542179 DNAH6Q9C0G6 4158 aa5.95□□□□□ -1.46
LDHA-220ENST00000542179 SACSQ9NZJ4 4579 aa5.95□□□□□ -1.46
LDHA-220ENST00000542179 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.94□□□□□ -1.46
LDHA-220ENST00000542179 H3BUT2 72 aa5.94□□□□□ -1.46
LDHA-220ENST00000542179 C9orf129Q5T035 196 aaKnown RBP5.94□□□□□ -1.46
LDHA-220ENST00000542179 Q8NDZ9 215 aa5.94□□□□□ -1.46
LDHA-220ENST00000542179 A0A1B0GV90 55 aa5.93□□□□□ -1.46
LDHA-220ENST00000542179 C16orf90A8MZG2 172 aa5.93□□□□□ -1.46
LDHA-220ENST00000542179 RTL8CO15255 209 aa5.93□□□□□ -1.46
LDHA-220ENST00000542179 VPREB1P12018 145 aa5.93□□□□□ -1.46
LDHA-220ENST00000542179 RPL13AP40429 203 aaKnown RBP5.93□□□□□ -1.46
LDHA-220ENST00000542179 RPL18AQ02543 176 aaKnown RBP5.93□□□□□ -1.46
LDHA-220ENST00000542179 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
LDHA-220ENST00000542179 IGLV5-37A0A075B6J1 123 aa5.92□□□□□ -1.46
LDHA-220ENST00000542179 A0A1W2PPM0 123 aa5.92□□□□□ -1.46
LDHA-220ENST00000542179 PRR3P79522 188 aaKnown RBP5.92□□□□□ -1.46
LDHA-220ENST00000542179 GAGE2BQ13066 116 aa5.92□□□□□ -1.46
LDHA-220ENST00000542179 SDIM1Q6ZPB5 146 aa5.92□□□□□ -1.46
LDHA-220ENST00000542179 TMEM126AQ9H061 195 aa5.92□□□□□ -1.46
LDHA-220ENST00000542179 KMT2AQ03164 3969 aa5.91□□□□□ -1.46
LDHA-220ENST00000542179 FABP2P12104 132 aa5.91□□□□□ -1.46
LDHA-220ENST00000542179 RPL28P46779 137 aaKnown RBP5.91□□□□□ -1.46
LDHA-220ENST00000542179 DNAH10Q8IVF4 4471 aa5.9□□□□□ -1.46
LDHA-220ENST00000542179 A0A096LNI7 61 aa5.9□□□□□ -1.46
LDHA-220ENST00000542179 H7C2G1 150 aa5.9□□□□□ -1.46
LDHA-220ENST00000542179 M0R378 163 aa5.9□□□□□ -1.46
LDHA-220ENST00000542179 IGLV6-57P01721 117 aa5.9□□□□□ -1.46
LDHA-220ENST00000542179 Q1RN00 199 aa5.9□□□□□ -1.46
LDHA-220ENST00000542179 LYRM7Q5U5X0 104 aa5.9□□□□□ -1.46
LDHA-220ENST00000542179 NAA38Q9BRA0 125 aaKnown RBP5.9□□□□□ -1.46
LDHA-220ENST00000542179 LINC00474Q9P2X8 69 aa5.9□□□□□ -1.46
LDHA-220ENST00000542179 NCR3O14931 201 aa5.89□□□□□ -1.47
LDHA-220ENST00000542179 COX6CP09669 75 aa5.89□□□□□ -1.47
LDHA-220ENST00000542179 PSMB2P49721 201 aa5.89□□□□□ -1.47
LDHA-220ENST00000542179 S100A7L2Q5SY68 101 aa5.89□□□□□ -1.47
LDHA-220ENST00000542179 SERTAD4-AS1Q5TG53 156 aa5.89□□□□□ -1.47
LDHA-220ENST00000542179 OR13C6PQ8NH95 151 aa5.89□□□□□ -1.47
LDHA-220ENST00000542179 TRBV20-1A0A075B6N2 111 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms